Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p046731 Quercus lobata HOM05D005598 ORTHO05D006587 9.1e-170 600.1 299 100.0
CiPaw.13G040600 Carya illinoinensis HOM05D005598 ORTHO05D006587 3.3e-151 538.5 299 88.6
CSS0000091 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 1.2e-150 536.6 299 88.3
TAR636G1340 Trochodendron aralioides HOM05D005598 ORTHO05D006587 1.8e-149 532.7 299 87.3
Haze_03295 Corylus avellana HOM05D005598 ORTHO05D006587 2.6e-148 528.9 310 86.1
Rhsim09G0141700 Rhododendron simsii HOM05D005598 ORTHO05D006587 4.4e-148 528.1 299 86.6
Atru.chr12.1043 Acer truncatum HOM05D005598 ORTHO05D006587 7.5e-148 527.3 299 85.3
MD02G1261600 Malus domestica HOM05D005598 ORTHO05D006587 7.5e-148 527.3 299 84.3
Lj2C33T4 Lonicera japonica HOM05D005598 ORTHO05D006587 9.2e-146 520.4 299 85.6
RcHm_v2.0_Chr5g0049931 Rosa chinensis HOM05D005598 ORTHO05D006587 3.5e-145 518.5 299 83.9
Nn6g34854 Nelumbo nucifera HOM05D005598 ORTHO05D006587 1.0e-144 516.9 299 84.3
Potri.008G019800 Populus trichocarpa HOM05D005598 ORTHO05D006587 1.7e-144 516.2 296 85.5
GSVIVG01010722001 Vitis vinifera HOM05D005598 ORTHO05D006587 2.3e-144 515.8 299 84.6
Cc02_g09610 Coffea canephora HOM05D005598 ORTHO05D006587 6.6e-144 514.2 293 85.7
PGR142G4231 Punica granatum HOM05D005598 ORTHO05D006587 1.5e-143 513.1 303 85.8
Sabra08G0013100 Salix brachista HOM05D005598 ORTHO05D006587 1.2e-142 510.0 297 84.2
Duzib128G1802 Durio zibethinus HOM05D005598 ORTHO05D006587 2.8e-142 508.8 299 83.3
TWI38G0756 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 4.7e-142 508.1 299 83.9
CsaV3_4G003460 Cucumis sativus L. HOM05D005598 ORTHO05D006587 1.4e-141 506.5 292 83.2
Ciclev10016103m.g Citrus clementina HOM05D005598 ORTHO05D006587 1.8e-141 506.1 299 81.6
FAN11G2626 Fragaria x ananassa HOM05D005598 ORTHO05D006587 1.2e-140 503.4 299 82.3
CANSAT56G2222 Cannabis sativa HOM05D005598 ORTHO05D006587 1.5e-140 503.1 299 82.9
Eucgr.G02689 Eucalyptus grandis HOM05D005598 ORTHO05D006587 2.0e-140 502.7 299 82.6
Thecc.10G109100 Theobroma cacao HOM05D005598 ORTHO05D006587 2.6e-140 502.3 299 81.9
MELO3C017716.2 Cucumis melo HOM05D005598 ORTHO05D006587 3.4e-140 501.9 292 82.5
Hund06785 Selenicereus undatus HOM05D005598 ORTHO05D006587 4.4e-140 501.5 292 83.9
Gohir.A05G287700 Gossypium hirsutum HOM05D005598 ORTHO05D006587 7.5e-140 500.7 300 82.7
Gorai.009G304000 Gossypium raimondii HOM05D005598 ORTHO05D006587 7.5e-140 500.7 300 82.3
FvH4_3g27560 Fragaria vesca HOM05D005598 ORTHO05D006587 9.9e-140 500.4 299 81.9
Sed0022725 Sechium edule HOM05D005598 ORTHO05D006587 9.9e-140 500.4 291 81.8
Aqoxy4G02744 Aquilegia oxysepala HOM05D005598 ORTHO05D006587 2.9e-139 498.8 300 81.0
arahy.Tifrunner.gnm1.ann1.8DLZ0X Arachis hypogaea HOM05D005598 ORTHO05D006587 3.7e-139 498.4 299 80.9
EL10Ac4g08688 Beta vulgaris HOM05D005598 ORTHO05D006587 3.7e-139 498.4 297 81.5
Gohir.D05G288900 Gossypium hirsutum HOM05D005598 ORTHO05D006587 3.7e-139 498.4 300 82.3
PSO339G6152 Papaver somniferum HOM05D005598 ORTHO05D006587 1.1e-138 496.9 301 80.7
arahy.Tifrunner.gnm1.ann1.L8YGTT Arachis hypogaea HOM05D005598 ORTHO05D006587 1.4e-138 496.5 300 81.3
DCAR_006354 Daucus carota HOM05D005598 ORTHO05D006587 1.4e-138 496.5 296 82.1
Ca_25662_v3 Cicer arietinum L. HOM05D005598 ORTHO05D006587 4.1e-138 495.0 300 82.7
Phvul.007G022800 Phaseolus vulgaris HOM05D005598 ORTHO05D006587 4.1e-138 495.0 294 82.3
Medtr1g111980 Medicago truncatula HOM05D005598 ORTHO05D006587 7.1e-138 494.2 299 81.3
THA.LOC104824207 Tarenaya hassleriana HOM05D005598 ORTHO05D006587 7.1e-138 494.2 300 79.7
ClCG07G015650 Citrullus lanatus HOM05D005598 ORTHO05D006587 9.2e-138 493.8 322 75.5
TPR.G2473 Trifolium pratense HOM05D005598 ORTHO05D006587 9.2e-138 493.8 299 81.3
HanXRQChr11g0342091 Helianthus annuus HOM05D005598 ORTHO05D006587 1.2e-137 493.4 299 80.6
MSTRG.23901 Avicennia marina HOM05D005598 ORTHO05D006587 2.7e-137 492.3 300 81.0
FAN16G3025 Fragaria x ananassa HOM05D005598 ORTHO05D006587 2.7e-137 492.3 299 80.6
Oeu024809.1 Olea europaea HOM05D005598 ORTHO05D006587 2.7e-137 492.3 329 75.1
vmacro10312 Vaccinium macrocarpon HOM05D005598 ORTHO05D006587 4.6e-137 491.5 299 81.6
AUR62042081 Chenopodium quinoa HOM05D005598 ORTHO05D006587 7.8e-137 490.7 293 80.9
VMungo0720G0111 Vigna mungo HOM05D005598 ORTHO05D006587 1.0e-136 490.3 293 81.6
Peaxi162Scf00173g00110 Petunia axillaris HOM05D005598 ORTHO05D006587 1.3e-136 490.0 299 80.9
ATR0820G296 Amborella trichopoda HOM05D005598 ORTHO05D006587 3.0e-136 488.8 299 79.3
Manes.10G062100 Manihot esculenta HOM05D005598 ORTHO05D006587 3.0e-136 488.8 281 85.8
Sc09g0005330 Simmondsia chinensis HOM05D005598 ORTHO05D006587 3.0e-136 488.8 299 80.3
CDE08G1414 Ceratophyllum demersum HOM05D005598 ORTHO05D006587 3.9e-136 488.4 294 78.6
Migut.F01603 Erythranthe guttata HOM05D005598 ORTHO05D006587 3.9e-136 488.4 299 80.9
Lj5g0018811 Lotus japonicus HOM05D005598 ORTHO05D006587 3.9e-136 488.4 299 80.6
Nitab4.5_0003590g0030 Nicotiana tabacum HOM05D005598 ORTHO05D006587 5.1e-136 488.0 299 80.9
Sopen11g002760 Solanum pennellii HOM05D005598 ORTHO05D006587 5.1e-136 488.0 299 80.6
Lalb_Chr02g0146251 Lupinus albus HOM05D005598 ORTHO05D006587 8.6e-136 487.3 299 80.9
Solyc11g006860.2 Solanum lycopersicum HOM05D005598 ORTHO05D006587 1.1e-135 486.9 299 80.6
PGSC0003DMG400023970 Solanum tuberosum HOM05D005598 ORTHO05D006587 3.3e-135 485.3 299 80.3
Lsat_1_v5_gn_2_104400 Lactuca sativa HOM05D005598 ORTHO05D006587 5.6e-135 484.6 292 79.5
CAN.G645.19 Capsicum annuum HOM05D005598 ORTHO05D006587 1.2e-134 483.4 299 80.3
SalBow6G5745 Salvia bowleyana HOM05D005598 ORTHO05D006587 1.2e-134 483.4 301 80.1
HPP92_000055 Vanilla planifolia HOM05D005598 ORTHO05D006587 3.4e-132 475.3 294 77.2
ECA238G1649 Erigeron canadensis HOM05D005598 ORTHO05D006587 2.2e-131 472.6 300 77.7
BcaC02g08374 Brassica carinata HOM05D005598 ORTHO05D006587 8.4e-131 470.7 292 77.1
C04p55060 Brassica napus HOM05D005598 ORTHO05D006587 8.4e-131 470.7 292 77.1
BolC4t27046H Brassica oleracea HOM05D005598 ORTHO05D006587 8.4e-131 470.7 292 77.1
BraA04t17544Z Brassica rapa HOM05D005598 ORTHO05D006587 8.4e-131 470.7 292 77.1
BcaB06g28035 Brassica carinata HOM05D005598 ORTHO05D006587 1.1e-130 470.3 292 77.1
A04p19500 Brassica napus HOM05D005598 ORTHO05D006587 1.4e-130 469.9 292 76.7
Sp4g04110 Schrenkiella parvula HOM05D005598 ORTHO05D006587 2.4e-130 469.2 296 76.7
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 3.2e-130 468.8 284 80.3
CSS0039611 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 1.2e-129 466.8 305 77.0
Aa31LG7G12150 Aethionema arabicum HOM05D005598 ORTHO05D006587 7.8e-129 464.2 296 75.7
Nitab4.5_0002586g0090 Nicotiana tabacum HOM05D005598 ORTHO05D006587 1.3e-128 463.4 334 71.9
Carub.0004s0468 Capsella rubella HOM05D005598 ORTHO05D006587 1.7e-128 463.0 299 74.9
AT2G25100 Arabidopsis thaliana HOM05D005598 ORTHO05D006587 3.3e-127 458.8 296 73.3
TWI63G1098 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 3.3e-127 458.8 299 78.3
CARHR116600 Cardamine hirsuta HOM05D005598 ORTHO05D006587 5.6e-127 458.0 299 73.9
Dinv11826 Davidia involucrata HOM05D005598 ORTHO05D006587 9.6e-127 457.2 267 85.8
Os11g0153900 Oryza sativa ssp. japonica HOM05D005598 ORTHO05D006587 2.1e-126 456.1 295 74.2
Actinidia34728 Actinidia chinensis HOM05D005598 ORTHO05D006587 9.0e-125 450.7 251 87.3
SGA_v2.0_scaffold62G21319 Striga asiatica HOM05D005598 ORTHO05D006587 6.4e-123 444.5 280 78.9
Dinv10930 Davidia involucrata HOM05D005598 ORTHO05D006587 1.9e-122 443.0 241 88.8
Glyma.10G278500 Glycine max HOM05D005598 ORTHO05D006587 2.1e-121 439.5 269 81.4
unitig_736.g22318 Utricularia gibba HOM05D005598 ORTHO05D006587 3.3e-119 432.2 297 71.7
Prupe.2G069600 Prunus persica HOM05D005598 ORTHO05D006587 1.3e-118 430.3 239 84.9
Thhalv10000575m.g Eutrema salsugineum HOM05D005598 ORTHO05D006587 5.3e-117 424.9 290 71.7
SEGI_12354 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 5.3e-117 424.9 289 69.6
PSO801G0206 Papaver somniferum HOM05D005598 ORTHO05D006587 2.6e-116 422.5 241 83.4
Zm00001eb406890 Zea mays HOM05D005598 ORTHO05D006587 1.6e-113 413.3 267 73.4
MBI01_g02157_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 1.9e-111 406.4 247 80.6
Cpa.g.c34135 Carica papaya HOM05D005598 ORTHO05D006587 1.5e-108 396.7 222 84.7
Psat0s4121g0080 Pisum sativum HOM05D005598 ORTHO05D006587 5.6e-103 378.3 240 79.2
Pp3c13_7860 Physcomitrium patens HOM05D005598 ORTHO05D006587 9.7e-95 350.9 291 60.1
Mapoly0006s0052 Marchantia polymorpha HOM05D005598 ORTHO05D006587 4.8e-94 348.6 295 57.3
AagrBONN_evm.TU.Sc2ySwM_362.477 Anthoceros agrestis HOM05D005598 ORTHO05D006587 5.3e-93 345.1 287 59.6
DCAR_006363 Daucus carota HOM05D005598 ORTHO05D006587 3.6e-89 332.4 281 66.9
AUR62041514 Chenopodium quinoa HOM05D005598 ORTHO05D006587 1.7e-86 323.6 408 48.0
AL4G16260 Arabidopsis lyrata HOM05D005598 ORTHO05D006587 1.5e-84 317.0 207 73.4
CiPaw.14G033400 Carya illinoinensis HOM05D005598 ORTHO05D006587 3.7e-70 269.2 258 62.4
SMO347G0320 Selaginella moellendorffii HOM05D005598 ORTHO05D006587 2.6e-68 263.1 272 52.9
Lalb_Chr21g0309151 Lupinus albus HOM05D005598 ORTHO05D006587 9.1e-61 238.0 153 79.1
Cre17.g701350 Chlamydomonas reinhardtii HOM05D005598 ORTHO05D006587 1.0e-56 224.6 291 40.9
Haze_26455 Corylus avellana HOM05D005598 ORTHO05D006587 1.3e-54 217.6 258 45.3
Ah.04g160180 Amaranthus hybridus HOM05D005598 ORTHO05D006587 6.3e-54 215.3 124 84.7
Psat4g059000 Pisum sativum HOM05D005598 ORTHO05D006587 1.8e-53 213.8 117 82.9
CBR_g29781 Chara braunii HOM05D005598 ORTHO05D006587 1.8e-48 197.2 190 55.3
Glyma.07G162800 Glycine max HOM05D005598 ORTHO05D006587 2.4e-45 186.8 218 50.5
MD02G1261400 Malus domestica HOM05D005598 ORTHO05D006587 2.3e-40 170.2 175 54.9
Cfa026153 Carpinus fangiana HOM05D005598 ORTHO05D006587 5.4e-37 159.1 221 42.5
HanXRQChr05g0158341 Helianthus annuus HOM05D005598 ORTHO05D006587 1.1e-34 151.4 111 66.7
Psat0s449g0080 Pisum sativum HOM05D000909 ORTHO05D000928 1.5e-26 124.4 75 80.0
Zm00001eb407010 Zea mays HOM05D005598 ORTHO05D006587 2.8e-25 120.2 82 73.2
Psat0s1058g0040 Pisum sativum HOM05D005598 ORTHO05D006587 7.8e-20 102.1 52 90.4
Lsat_1_v5_gn_9_94660 Lactuca sativa HOM05D005598 ORTHO05D006587 5.6e-18 95.9 60 78.3
SEGI_12669 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 8.1e-17 92.0 51 76.5
MBI01_g19134_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 1.1e-16 91.7 55 78.2
Psat4g071240 Pisum sativum HOM05D005598 ORTHO05D006587 3.1e-16 90.1 192 38.5
Psat5g299440 Pisum sativum HOM05D005598 ORTHO05D006587 6.8e-16 89.0 157 37.6
Psat5g185320 Pisum sativum HOM05D000559 ORTHO05D006587 3.4e-15 86.7 54 75.9
Lalb_Chr21g0309141 Lupinus albus HOM05D005598 ORTHO05D006587 4.9e-14 82.8 54 74.1
Sabra10G0187600 Salix brachista HOM05D005598 ORTHO05D006587 7.1e-13 79.0 147 36.7
Lalb_Chr21g0309161 Lupinus albus HOM05D005598 ORTHO05D006587 1.6e-12 77.8 58 70.7
Cre13.g561900 Chlamydomonas reinhardtii HOM05D016613 ORTHO05D014817 2.8e-09 67.0 181 30.4
Pp3c2_19600 Physcomitrium patens HOM05D016613 ORTHO05D014817 1.4e-08 64.7 170 29.4
Mapoly0023s0164 Marchantia polymorpha HOM05D016613 ORTHO05D014817 1.8e-08 64.3 185 30.3
MCO01G455 Micromonas commoda HOM05D016613 ORTHO05D014817 6.9e-08 62.4 164 31.1
Psat6g162040 Pisum sativum HOM05D005598 ORTHO05D006587 1.5e-07 61.2 64 54.7
Potri.010G239500 Populus trichocarpa HOM05D005598 ORTHO05D006587 1.5e-07 61.2 58 56.9
ClCG05G021840 Citrullus lanatus HOM05D005598 ORTHO05D006587 7.6e-07 58.9 81 46.9
Actinidia27053 Actinidia chinensis HOM05D005215 ORTHO05D006382 1.3e-06 58.2 54 61.1
Psat7g021760 Pisum sativum HOM05D000559 ORTHO05D000596 1.7e-06 57.8 29 82.8
A09p55890 Brassica napus HOM05D005598 ORTHO05D040595 2.2e-06 57.4 75 40.0
BraA09t40992Z Brassica rapa HOM05D005598 ORTHO05D040595 2.9e-06 57.0 53 50.9
SMO118G0286 Selaginella moellendorffii HOM05D016613 ORTHO05D014817 3.8e-06 56.6 170 27.6


User provided reference genes

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