Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p035108 Quercus lobata HOM05D005846 ORTHO05D007369 5.0e-41 170.6 84 100.0
QL04p035021 Quercus lobata HOM05D005846 ORTHO05D007369 2.5e-32 141.7 79 91.1
CiPaw.06G031700 Carya illinoinensis HOM05D005846 ORTHO05D007369 4.7e-31 137.5 79 87.3
HanXRQChr06g0168821 Helianthus annuus HOM05D005846 ORTHO05D007369 1.8e-30 135.6 79 86.1
Peaxi162Scf00377g00722 Petunia axillaris HOM05D005846 ORTHO05D007369 1.5e-29 132.5 77 87.0
PGR004G1251 Punica granatum HOM05D005846 ORTHO05D007369 1.5e-29 132.5 79 86.1
Sp4g27070 Schrenkiella parvula HOM05D005846 ORTHO05D007369 1.5e-29 132.5 79 84.8
COL.COLO4_35176 Corchorus olitorius HOM05D005846 ORTHO05D007369 2.6e-29 131.7 79 82.3
QL04p035237 Quercus lobata HOM05D005846 ORTHO05D007369 2.6e-29 131.7 76 88.2
Rhsim02G0216700 Rhododendron simsii HOM05D005846 ORTHO05D007369 3.4e-29 131.3 79 83.5
Atru.chr5.196 Acer truncatum HOM05D005846 ORTHO05D007369 4.4e-29 131.0 79 82.3
AL4G44100 Arabidopsis lyrata HOM05D005846 ORTHO05D007369 4.4e-29 131.0 79 82.3
Thhalv10001339m.g Eutrema salsugineum HOM05D005846 ORTHO05D007369 4.4e-29 131.0 79 83.5
Carub.0004s2760 Capsella rubella HOM05D005846 ORTHO05D007369 5.8e-29 130.6 79 82.3
Cfa011122 Carpinus fangiana HOM05D005846 ORTHO05D007369 5.8e-29 130.6 79 83.5
ECA236G0469 Erigeron canadensis HOM05D005846 ORTHO05D007369 7.5e-29 130.2 77 84.4
Thecc.01G387400 Theobroma cacao HOM05D005846 ORTHO05D007369 9.8e-29 129.8 79 82.3
CAN.G899.26 Capsicum annuum HOM05D005846 ORTHO05D007369 1.3e-28 129.4 77 83.1
Duzib116G0440 Durio zibethinus HOM05D005846 ORTHO05D007369 1.3e-28 129.4 77 81.8
SGA_v2.0_scaffold52G19202 Striga asiatica HOM05D005846 ORTHO05D007369 1.7e-28 129.0 77 84.4
vmacro13469 Vaccinium macrocarpon HOM05D005846 ORTHO05D007369 2.2e-28 128.6 77 81.8
AT2G45000 Arabidopsis thaliana HOM05D005846 ORTHO05D007369 2.9e-28 128.3 79 81.0
CSS0006984 Camellia sinensis var. sinensis HOM05D005846 ORTHO05D007369 2.9e-28 128.3 77 83.1
CSS0013945 Camellia sinensis var. sinensis HOM05D005846 ORTHO05D007369 2.9e-28 128.3 77 83.1
CARHR140260 Cardamine hirsuta HOM05D005846 ORTHO05D007369 2.9e-28 128.3 79 81.0
BcaC02g12270 Brassica carinata HOM05D005846 ORTHO05D007369 4.9e-28 127.5 80 83.8
A05p05100 Brassica napus HOM05D005846 ORTHO05D007369 4.9e-28 127.5 80 83.8
Eucgr.D02512 Eucalyptus grandis HOM05D005846 ORTHO05D007369 4.9e-28 127.5 79 78.5
Nitab4.5_0003110g0060 Nicotiana tabacum HOM05D005846 ORTHO05D007369 4.9e-28 127.5 77 84.4
Prupe.2G134200 Prunus persica HOM05D005846 ORTHO05D007369 4.9e-28 127.5 79 81.0
TWI14G0811 Tripterygium wilfordii HOM05D005846 ORTHO05D007369 6.4e-28 127.1 79 79.7
arahy.Tifrunner.gnm1.ann1.DPE9LE Arachis hypogaea HOM05D005846 ORTHO05D007369 8.3e-28 126.7 79 78.5
arahy.Tifrunner.gnm1.ann1.SA9NP4 Arachis hypogaea HOM05D005846 ORTHO05D007369 8.3e-28 126.7 79 78.5
Atru.chr5.198 Acer truncatum HOM05D002424 ORTHO05D002640 1.1e-27 126.3 80 81.2
MD07G1110700 Malus domestica HOM05D005846 ORTHO05D007369 1.9e-27 125.6 79 79.7
THA.LOC104802481 Tarenaya hassleriana HOM05D005846 ORTHO05D007369 1.9e-27 125.6 79 81.0
Aa31LG1G26590 Aethionema arabicum HOM05D005846 ORTHO05D007369 2.4e-27 125.2 79 78.5
Manes.05G051500 Manihot esculenta HOM05D005846 ORTHO05D007369 2.4e-27 125.2 79 77.2
BraA05t19484Z Brassica rapa HOM05D005846 ORTHO05D007369 3.2e-27 124.8 79 83.5
DCAR_031886 Daucus carota HOM05D005846 ORTHO05D007369 3.2e-27 124.8 79 79.7
RcHm_v2.0_Chr1g0348261 Rosa chinensis HOM05D005846 ORTHO05D007369 3.2e-27 124.8 79 79.7
Hund27391 Selenicereus undatus HOM05D005846 ORTHO05D007369 3.2e-27 124.8 77 80.5
C04p05950 Brassica napus HOM05D005846 ORTHO05D007369 4.1e-27 124.4 80 82.5
BolC4t22226H Brassica oleracea HOM05D005846 ORTHO05D007369 4.1e-27 124.4 80 82.5
Haze_02742 Corylus avellana HOM05D005846 ORTHO05D007369 4.1e-27 124.4 88 75.0
Dinv44098 Davidia involucrata HOM05D005846 ORTHO05D007369 4.1e-27 124.4 79 84.8
FAN01G1706 Fragaria x ananassa HOM05D005846 ORTHO05D007369 5.4e-27 124.0 79 77.2
FAN03G1473 Fragaria x ananassa HOM05D005846 ORTHO05D007369 5.4e-27 124.0 79 77.2
FAN06G0321 Fragaria x ananassa HOM05D005846 ORTHO05D007369 5.4e-27 124.0 79 77.2
FAN06G3163 Fragaria x ananassa HOM05D005846 ORTHO05D007369 5.4e-27 124.0 79 77.2
FAN10G4209 Fragaria x ananassa HOM05D005846 ORTHO05D007369 5.4e-27 124.0 79 77.2
Lsat_1_v5_gn_7_11161 Lactuca sativa HOM05D005846 ORTHO05D007369 5.4e-27 124.0 83 79.5
GSVIVG01018216001 Vitis vinifera HOM05D005846 ORTHO05D007369 5.4e-27 124.0 79 77.2
Ciclev10019079m.g Citrus clementina HOM05D005846 ORTHO05D007369 9.2e-27 123.2 79 78.5
Potri.014G057000 Populus trichocarpa HOM05D005846 ORTHO05D007369 9.2e-27 123.2 76 80.3
ClCG06G002930 Citrullus lanatus HOM05D005846 ORTHO05D007369 1.6e-26 122.5 80 78.8
MELO3C022237.2 Cucumis melo HOM05D005846 ORTHO05D007369 1.6e-26 122.5 80 78.8
Lj9C561G11 Lonicera japonica HOM05D005846 ORTHO05D007369 2.0e-26 122.1 77 77.9
MSTRG.28219 Avicennia marina HOM05D005846 ORTHO05D007369 2.7e-26 121.7 79 79.7
Migut.B01566 Erythranthe guttata HOM05D005846 ORTHO05D007369 2.7e-26 121.7 77 80.5
Ah.05g173450 Amaranthus hybridus HOM05D005846 ORTHO05D007369 3.5e-26 121.3 77 77.9
CANSAT21G1379 Cannabis sativa HOM05D005846 ORTHO05D007369 3.5e-26 121.3 79 75.9
FAN10G1341 Fragaria x ananassa HOM05D005846 ORTHO05D007369 3.5e-26 121.3 79 75.9
Cc02_g24740 Coffea canephora HOM05D005846 ORTHO05D007369 4.6e-26 120.9 77 77.9
MBI05_g14240_MAGBIO Magnolia biondii HOM05D005846 ORTHO05D007369 6.0e-26 120.6 79 73.4
Aqoxy5G03824 Aquilegia oxysepala HOM05D005846 ORTHO05D007369 7.8e-26 120.2 79 74.7
CsaV3_6G009050 Cucumis sativus L. HOM05D005846 ORTHO05D007369 7.8e-26 120.2 80 77.5
Gohir.A11G139400 Gossypium hirsutum HOM05D005846 ORTHO05D007369 7.8e-26 120.2 80 75.0
Solyc01g090670.3 Solanum lycopersicum HOM05D005846 ORTHO05D007369 7.8e-26 120.2 77 80.5
Actinidia22778 Actinidia chinensis HOM05D005846 ORTHO05D007369 1.0e-25 119.8 76 80.3
Actinidia22833 Actinidia chinensis HOM05D005846 ORTHO05D007369 1.0e-25 119.8 76 80.3
Gohir.D11G145600 Gossypium hirsutum HOM05D005846 ORTHO05D007369 1.0e-25 119.8 80 75.0
Gorai.007G156100 Gossypium raimondii HOM05D005846 ORTHO05D007369 1.0e-25 119.8 80 75.0
TPR.G39153 Trifolium pratense HOM05D005846 ORTHO05D007369 1.0e-25 119.8 79 75.9
VMungo1383G2837 Vigna mungo HOM05D005846 ORTHO05D007369 1.0e-25 119.8 79 74.7
Lj1g0009878 Lotus japonicus HOM05D005846 ORTHO05D007369 1.3e-25 119.4 79 74.7
Phvul.007G143350 Phaseolus vulgaris HOM05D005846 ORTHO05D007369 1.3e-25 119.4 79 73.4
Psat3g158120 Pisum sativum HOM05D005846 ORTHO05D007369 1.7e-25 119.0 79 75.9
Sabra14G0041600 Salix brachista HOM05D002053 ORTHO05D002135 2.3e-25 118.6 71 83.1
Medtr7g045280 Medicago truncatula HOM05D005846 ORTHO05D007369 3.9e-25 117.9 77 75.3
Sopen01g036400 Solanum pennellii HOM05D005846 ORTHO05D007369 3.9e-25 117.9 77 79.2
EL10Ac1g00809 Beta vulgaris HOM05D005846 ORTHO05D007369 5.0e-25 117.5 77 76.6
Nitab4.5_0001823g0090 Nicotiana tabacum HOM05D005846 ORTHO05D007369 1.9e-24 115.5 94 68.1
Sed0022623 Sechium edule HOM05D005846 ORTHO05D007369 3.3e-24 114.8 81 76.5
Glyma.01G074700 Glycine max HOM05D005846 ORTHO05D007369 9.5e-24 113.2 79 72.2
CDE02G2440 Ceratophyllum demersum HOM05D005846 ORTHO05D007369 1.6e-23 112.5 77 68.8
Glyma.11G162365 Glycine max HOM05D005846 ORTHO05D007369 2.8e-23 111.7 79 70.9
Lalb_Chr19g0126671 Lupinus albus HOM05D005846 ORTHO05D007369 3.6e-23 111.3 82 68.3
unitig_26.g8879 Utricularia gibba HOM05D005846 ORTHO05D007369 3.1e-22 108.2 78 73.1
AUR62004139 Chenopodium quinoa HOM05D005846 ORTHO05D007369 5.2e-22 107.5 67 80.6
AUR62013700 Chenopodium quinoa HOM05D005846 ORTHO05D007369 5.2e-22 107.5 67 80.6
PSO541G5798 Papaver somniferum HOM05D005846 ORTHO05D007369 5.2e-22 107.5 77 70.1
PSO675G5996 Papaver somniferum HOM05D005846 ORTHO05D007369 5.2e-22 107.5 77 70.1
Ca_26287_v3 Cicer arietinum L. HOM05D005846 ORTHO05D007369 6.8e-22 107.1 67 79.1
arahy.Tifrunner.gnm1.ann1.2XVX2B Arachis hypogaea HOM05D005846 ORTHO05D007369 2.0e-21 105.5 108 54.6
CDE04G1707 Ceratophyllum demersum HOM05D005846 ORTHO05D007369 2.6e-21 105.1 77 64.9
ATR0559G037 Amborella trichopoda HOM05D005846 ORTHO05D007369 3.7e-20 101.3 71 71.8
Os01g0856600 Oryza sativa ssp. japonica HOM05D005846 ORTHO05D007369 6.4e-20 100.5 79 63.3
Zm00001eb367060 Zea mays HOM05D005846 ORTHO05D007369 1.1e-19 99.8 79 62.0
HPP92_002750 Vanilla planifolia HOM05D005846 ORTHO05D007369 7.1e-19 97.1 77 61.0
Cpa.g.sc22.4 Carica papaya HOM05D005846 ORTHO05D007369 4.6e-18 94.4 50 92.0
Atru.chr5.201 Acer truncatum HOM05D005846 ORTHO05D007369 3.9e-17 91.3 62 72.6
HPP92_027757 Vanilla planifolia HOM05D005846 ORTHO05D007369 3.3e-16 88.2 60 71.7
AagrBONN_evm.TU.Sc2ySwM_117.1077 Anthoceros agrestis HOM05D005846 ORTHO05D007369 2.1e-15 85.5 65 63.1
TAR375G0515 Trochodendron aralioides HOM05D005846 ORTHO05D007369 2.1e-15 85.5 49 83.7
Oeu061505.1 Olea europaea HOM05D005846 ORTHO05D007369 2.8e-15 85.1 49 81.6
Nn6g33892 Nelumbo nucifera HOM05D005846 ORTHO05D007369 4.7e-15 84.3 51 78.4
HanXRQChr04g0123471 Helianthus annuus HOM05D005846 ORTHO05D007369 8.1e-15 83.6 49 81.6
FvH4_7g10470 Fragaria vesca HOM05D005846 ORTHO05D007369 1.4e-14 82.8 49 81.6
Pp3c15_14630 Physcomitrium patens HOM05D005846 ORTHO05D007369 2.4e-14 82.0 65 61.5
Mapoly0005s0221 Marchantia polymorpha HOM05D005846 ORTHO05D007369 7.6e-13 77.0 63 58.7
Lsat_1_v5_gn_4_126501 Lactuca sativa HOM05D005846 ORTHO05D007369 3.2e-11 71.6 50 76.0
HanXRQChr02g0053971 Helianthus annuus HOM05D005846 ORTHO05D000176 1.1e-08 63.2 36 86.1
HanXRQChr12g0366671 Helianthus annuus HOM05D005846 ORTHO05D007369 1.1e-08 63.2 36 83.3
HanXRQChr16g0530801 Helianthus annuus HOM05D005846 ORTHO05D007369 3.3e-08 61.6 36 80.6
HanXRQChr01g0009681 Helianthus annuus HOM05D005846 ORTHO05D007369 2.4e-06 55.5 36 72.2
QL04p035096 Quercus lobata HOM05D005846 ORTHO05D007369 5.2e-06 54.3 31 83.9


User provided reference genes

Program Settings