Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p030068 Quercus lobata HOM05D004422 ORTHO05D007331 6.0e-96 354.4 204 100.0
QL10p000960 Quercus lobata HOM05D004422 ORTHO05D007331 1.7e-71 273.1 186 75.3
Haze_02852 Corylus avellana HOM05D004422 ORTHO05D007331 5.6e-62 241.5 188 66.0
Cfa011065 Carpinus fangiana HOM05D004422 ORTHO05D007331 4.8e-61 238.4 188 64.9
CiPaw.14G020100 Carya illinoinensis HOM05D004422 ORTHO05D007331 1.5e-59 233.4 191 65.4
MD07G1109400 Malus domestica HOM05D004422 ORTHO05D007331 2.0e-59 233.0 191 64.9
Manes.05G055300 Manihot esculenta HOM05D004422 ORTHO05D007331 2.0e-59 233.0 194 65.5
Thecc.01G395500 Theobroma cacao HOM05D004422 ORTHO05D007331 8.4e-58 227.6 189 65.6
TWI59G1250 Tripterygium wilfordii HOM05D004422 ORTHO05D007331 7.1e-57 224.6 187 64.2
COL.COLO4_07156 Corchorus olitorius HOM05D004422 ORTHO05D007331 1.2e-56 223.8 186 64.5
RcHm_v2.0_Chr1g0348021 Rosa chinensis HOM05D004422 ORTHO05D007331 1.6e-56 223.4 188 64.4
Peaxi162Scf00475g00041 Petunia axillaris HOM05D004422 ORTHO05D007331 2.7e-56 222.6 186 64.0
Duzib268G0035 Durio zibethinus HOM05D004422 ORTHO05D007331 3.5e-56 222.2 193 64.2
Eucgr.H04784 Eucalyptus grandis HOM05D004422 ORTHO05D007331 6.0e-56 221.5 193 62.2
Migut.B01531 Erythranthe guttata HOM05D004422 ORTHO05D007331 1.0e-55 220.7 187 62.6
Gohir.A08G029300 Gossypium hirsutum HOM05D004422 ORTHO05D007331 1.3e-55 220.3 187 77.0
Nn1g00835 Nelumbo nucifera HOM05D004422 ORTHO05D007331 1.3e-55 220.3 190 62.1
CAN.G1497.17 Capsicum annuum HOM05D004422 ORTHO05D007331 1.8e-55 219.9 186 64.0
Ciclev10018701m.g Citrus clementina HOM05D004422 ORTHO05D007331 1.8e-55 219.9 191 63.4
vmacro13500 Vaccinium macrocarpon HOM05D004422 ORTHO05D007331 1.8e-55 219.9 186 61.8
CANSAT25G3675 Cannabis sativa HOM05D004422 ORTHO05D007331 3.0e-55 219.2 189 63.0
Gorai.004G038800 Gossypium raimondii HOM05D004422 ORTHO05D007331 3.0e-55 219.2 186 77.4
Sopen01g035990 Solanum pennellii HOM05D004422 ORTHO05D007331 5.1e-55 218.4 190 66.3
FAN06G3830 Fragaria x ananassa HOM05D004422 ORTHO05D007331 6.7e-55 218.0 187 65.2
FAN01G0685 Fragaria x ananassa HOM05D004422 ORTHO05D007331 8.7e-55 217.6 187 65.2
Lj7C547G5 Lonicera japonica HOM05D004422 ORTHO05D007331 8.7e-55 217.6 187 62.0
CSS0020521 Camellia sinensis var. sinensis HOM05D004422 ORTHO05D007331 1.1e-54 217.2 186 61.3
Gohir.D08G040000 Gossypium hirsutum HOM05D004422 ORTHO05D007331 1.1e-54 217.2 186 76.9
Potri.014G049200 Populus trichocarpa HOM05D004422 ORTHO05D007331 1.1e-54 217.2 198 61.6
Cpa.g.sc22.52 Carica papaya HOM05D004422 ORTHO05D007331 1.5e-54 216.9 191 63.9
FAN03G1687 Fragaria x ananassa HOM05D004422 ORTHO05D007331 1.5e-54 216.9 187 65.2
Nitab4.5_0000920g0050 Nicotiana tabacum HOM05D004422 ORTHO05D007331 1.5e-54 216.9 191 62.8
Sabra14G0035000 Salix brachista HOM05D004422 ORTHO05D007331 1.5e-54 216.9 194 62.9
Solyc01g090200.4 Solanum lycopersicum HOM05D004422 ORTHO05D007331 1.5e-54 216.9 186 69.9
Actinidia32507 Actinidia chinensis HOM05D004422 ORTHO05D007331 1.9e-54 216.5 185 63.8
AUR62025581 Chenopodium quinoa HOM05D004422 ORTHO05D007331 4.3e-54 215.3 187 62.6
COL.COLO4_30046 Corchorus olitorius HOM05D004422 ORTHO05D007331 4.3e-54 215.3 204 60.3
Lsat_1_v5_gn_4_39461 Lactuca sativa HOM05D004422 ORTHO05D007331 4.3e-54 215.3 194 60.3
Dinv44059 Davidia involucrata HOM05D004422 ORTHO05D007331 5.6e-54 214.9 191 60.2
GSVIVG01018288001 Vitis vinifera HOM05D004422 ORTHO05D007331 5.6e-54 214.9 187 62.6
Aqoxy5G04133 Aquilegia oxysepala HOM05D004422 ORTHO05D007331 9.6e-54 214.2 191 59.7
ECA234G0959 Erigeron canadensis HOM05D004422 ORTHO05D007331 9.6e-54 214.2 192 59.9
VMungo0331G1046 Vigna mungo HOM05D004422 ORTHO05D007331 9.6e-54 214.2 187 65.2
EL10Ac7g18223 Beta vulgaris HOM05D004422 ORTHO05D007331 1.6e-53 213.4 190 62.6
HanXRQChr16g0521111 Helianthus annuus HOM05D004422 ORTHO05D007331 2.1e-53 213.0 188 60.6
PSO782G5506 Papaver somniferum HOM05D004422 ORTHO05D007331 2.8e-53 212.6 197 57.4
Hund18610 Selenicereus undatus HOM05D004422 ORTHO05D007331 2.8e-53 212.6 186 64.5
Dinv43612 Davidia involucrata HOM05D004422 ORTHO05D007331 3.7e-53 212.2 189 60.8
Rhsim07G0036300 Rhododendron simsii HOM05D004422 ORTHO05D007331 3.7e-53 212.2 186 60.2
CANSAT25G3884 Cannabis sativa HOM05D004422 ORTHO05D007331 4.8e-53 211.8 189 60.3
Sp5g30300 Schrenkiella parvula HOM05D004422 ORTHO05D007331 4.8e-53 211.8 183 62.3
THA.LOC104816999 Tarenaya hassleriana HOM05D004422 ORTHO05D007331 4.8e-53 211.8 190 61.1
FAN10G2373 Fragaria x ananassa HOM05D004422 ORTHO05D007331 6.2e-53 211.5 187 63.6
Carub.0005s1421 Capsella rubella HOM05D004422 ORTHO05D007331 8.1e-53 211.1 183 62.3
CDE09G1306 Ceratophyllum demersum HOM05D004422 ORTHO05D007331 1.1e-52 210.7 194 58.8
Glyma.03G110500 Glycine max HOM05D004422 ORTHO05D007331 1.8e-52 209.9 186 66.7
Lj3g0007750 Lotus japonicus HOM05D004422 ORTHO05D007331 6.9e-52 208.0 186 68.3
arahy.Tifrunner.gnm1.ann1.Q83G00 Arachis hypogaea HOM05D004422 ORTHO05D007331 9.0e-52 207.6 186 59.7
AL5G27440 Arabidopsis lyrata HOM05D004422 ORTHO05D007331 1.2e-51 207.2 186 65.1
BcaB02g07011 Brassica carinata HOM05D004422 ORTHO05D007331 1.2e-51 207.2 187 60.4
A07p29020 Brassica napus HOM05D004422 ORTHO05D007331 1.2e-51 207.2 184 62.0
C06p32790 Brassica napus HOM05D004422 ORTHO05D007331 1.2e-51 207.2 187 60.4
BolC6t38401H Brassica oleracea HOM05D004422 ORTHO05D007331 1.2e-51 207.2 187 60.4
BraA07t30542Z Brassica rapa HOM05D004422 ORTHO05D007331 1.5e-51 206.8 184 61.4
ClCG06G002430 Citrullus lanatus HOM05D004422 ORTHO05D007331 1.5e-51 206.8 189 60.8
Ah.15g094660 Amaranthus hybridus HOM05D004422 ORTHO05D007331 3.4e-51 205.7 187 60.4
MSTRG.20687 Avicennia marina HOM05D004422 ORTHO05D007331 3.4e-51 205.7 192 58.3
MELO3C022290.2 Cucumis melo HOM05D004422 ORTHO05D007331 3.4e-51 205.7 189 60.8
CsaV3_6G008710 Cucumis sativus L. HOM05D004422 ORTHO05D007331 5.8e-51 204.9 186 60.2
Thhalv10018047m.g Eutrema salsugineum HOM05D004422 ORTHO05D007331 5.8e-51 204.9 187 61.0
Sed0020409 Sechium edule HOM05D004422 ORTHO05D007331 5.8e-51 204.9 186 59.1
SGA_v2.0_scaffold340G49325 Striga asiatica HOM05D004422 ORTHO05D007331 5.8e-51 204.9 186 60.8
Atru.chr5.121 Acer truncatum HOM05D004422 ORTHO05D007331 7.6e-51 204.5 182 69.2
SalBow5G1783 Salvia bowleyana HOM05D004422 ORTHO05D007331 7.6e-51 204.5 193 59.1
TAR375G0830 Trochodendron aralioides HOM05D004422 ORTHO05D007331 1.3e-50 203.8 112 84.8
AT3G48110 Arabidopsis thaliana HOM05D004422 ORTHO05D007331 1.7e-50 203.4 189 61.4
Lalb_Chr07g0195401 Lupinus albus HOM05D004422 ORTHO05D007331 3.8e-50 202.2 186 65.6
TPR.G33119 Trifolium pratense HOM05D004422 ORTHO05D007331 4.9e-50 201.8 107 86.9
Os06g0103600 Oryza sativa ssp. japonica HOM05D004422 ORTHO05D007331 1.4e-49 200.3 116 81.9
Zm00001eb379480 Zea mays HOM05D004422 ORTHO05D007331 1.4e-49 200.3 106 87.7
Ca_25801_v3 Cicer arietinum L. HOM05D004422 ORTHO05D007331 2.5e-49 199.5 102 89.2
Medtr8g006955 Medicago truncatula HOM05D004422 ORTHO05D007331 2.5e-49 199.5 102 89.2
ATR0057G028 Amborella trichopoda HOM05D004422 ORTHO05D007331 3.2e-49 199.1 110 84.5
Aa31LG1G11470 Aethionema arabicum HOM05D004422 ORTHO05D007331 5.5e-49 198.4 105 87.6
Psat4g224760 Pisum sativum HOM05D004422 ORTHO05D007331 7.1e-49 198.0 102 87.3
SEGI_38441 Sequoiadendron giganteum HOM05D004422 ORTHO05D007331 7.9e-48 194.5 107 83.2
AagrBONN_evm.TU.Sc2ySwM_117.3818 Anthoceros agrestis HOM05D004422 ORTHO05D007331 8.7e-47 191.0 115 79.1
Mapoly0186s0003 Marchantia polymorpha HOM05D004422 ORTHO05D007331 4.3e-46 188.7 103 83.5
Pp3c1_42870 Physcomitrium patens HOM05D004422 ORTHO05D007331 4.3e-46 188.7 109 78.9
SGA_v2.0_scaffold52G19227 Striga asiatica HOM05D004422 ORTHO05D007331 8.2e-45 184.5 149 63.8
CBR_g19146 Chara braunii HOM05D004422 ORTHO05D007331 2.4e-44 183.0 110 72.7
AUR62001366 Chenopodium quinoa HOM05D004422 ORTHO05D007331 5.3e-44 181.8 93 88.2
Nitab4.5_0002685g0030 Nicotiana tabacum HOM05D004422 ORTHO05D007331 3.8e-42 175.6 167 63.5
Cre10.g433000 Chlamydomonas reinhardtii HOM05D004422 ORTHO05D007331 1.4e-41 173.7 101 77.2
PRCOL_00000491 Prasinoderma coloniale HOM05D004422 ORTHO05D007331 7.2e-41 171.4 105 73.3
Actinidia18350 Actinidia chinensis HOM05D004422 ORTHO05D007331 9.3e-41 171.0 188 54.3
unitig_0.g1355 Utricularia gibba HOM05D004422 ORTHO05D007331 9.3e-41 171.0 170 55.9
Cc02_g25150 Coffea canephora HOM05D004422 ORTHO05D007331 1.0e-39 167.5 123 71.5
MCO03G257 Micromonas commoda HOM05D004422 ORTHO05D007331 3.0e-39 166.0 118 66.1
DCAR_029470 Daucus carota HOM05D004422 ORTHO05D007331 7.4e-38 161.4 82 90.2
HPP92_002531 Vanilla planifolia HOM05D004422 ORTHO05D007331 4.8e-37 158.7 82 87.8
Sc12g0011040 Simmondsia chinensis HOM05D004422 ORTHO05D007331 1.9e-33 146.7 76 88.2
arahy.Tifrunner.gnm1.ann1.NVW2FV Arachis hypogaea HOM05D004422 ORTHO05D007331 2.5e-33 146.4 75 89.3
Oeu000053.1 Olea europaea HOM05D004422 ORTHO05D007331 6.7e-31 138.3 70 90.0
FAN06G1066 Fragaria x ananassa HOM05D004422 ORTHO05D007331 1.0e-26 124.4 135 57.0
FAN10G4150 Fragaria x ananassa HOM05D004422 ORTHO05D007331 1.0e-26 124.4 135 57.0
Haze_27357 Corylus avellana HOM05D004422 ORTHO05D007331 1.4e-25 120.6 107 51.4
Prupe.2G132400 Prunus persica HOM05D004422 ORTHO05D007331 5.9e-19 98.6 53 83.0
Phvul.010G049401 Phaseolus vulgaris HOM05D004422 ORTHO05D007331 1.0e-18 97.8 52 84.6


User provided reference genes

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