Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p057108 Quercus lobata HOM05D003359 ORTHO05D004472 6.9e-92 340.5 158 100.0
QL03p057155 Quercus lobata HOM05D003359 ORTHO05D004472 1.4e-89 332.8 163 96.3
QL03p057135 Quercus lobata HOM05D003359 ORTHO05D004472 4.5e-83 311.2 193 80.3
QL03p057097 Quercus lobata HOM05D003359 ORTHO05D004472 8.8e-71 270.4 189 70.9
QL03p056989 Quercus lobata HOM05D003359 ORTHO05D004472 3.0e-63 245.4 189 64.0
MSTRG.7949 Avicennia marina HOM05D003359 ORTHO05D004472 3.8e-58 228.4 186 60.8
EL10Ac6g13871 Beta vulgaris HOM05D003359 ORTHO05D004472 5.0e-58 228.0 187 59.9
CiPaw.05G179800 Carya illinoinensis HOM05D003359 ORTHO05D004472 1.5e-57 226.5 183 61.7
QL03p057173 Quercus lobata HOM05D003359 ORTHO05D004472 1.5e-57 226.5 187 58.8
QL03p057181 Quercus lobata HOM05D003359 ORTHO05D004472 1.9e-57 226.1 187 59.9
QL08p013031 Quercus lobata HOM05D003359 ORTHO05D004472 1.9e-57 226.1 187 58.8
CANSAT01G0511 Cannabis sativa HOM05D003359 ORTHO05D004472 2.5e-57 225.7 188 60.1
COL.COLO4_23483 Corchorus olitorius HOM05D003359 ORTHO05D004472 2.5e-57 225.7 191 57.6
Eucgr.H02479 Eucalyptus grandis HOM05D003359 ORTHO05D004472 3.2e-57 225.3 183 59.6
Duzib251G0748 Durio zibethinus HOM05D003359 ORTHO05D004472 4.2e-57 224.9 191 57.1
Dinv14737 Davidia involucrata HOM05D003359 ORTHO05D004472 9.4e-57 223.8 183 60.1
AUR62005500 Chenopodium quinoa HOM05D003359 ORTHO05D004472 1.2e-56 223.4 189 57.7
Ciclev10030938m.g Citrus clementina HOM05D003359 ORTHO05D004472 1.2e-56 223.4 183 60.7
Thecc.02G263100 Theobroma cacao HOM05D003359 ORTHO05D004472 1.2e-56 223.4 191 57.1
Eucgr.H02480 Eucalyptus grandis HOM05D003359 ORTHO05D004472 2.7e-56 222.2 185 58.4
Cpa.g.sc33.46 Carica papaya HOM05D003359 ORTHO05D004472 3.6e-56 221.9 187 58.8
Migut.K00614 Erythranthe guttata HOM05D003359 ORTHO05D004472 4.7e-56 221.5 187 57.8
Carub.0005s0430 Capsella rubella HOM05D003359 ORTHO05D004472 6.1e-56 221.1 187 59.4
Duzib268G0493 Durio zibethinus HOM05D003359 ORTHO05D004472 6.1e-56 221.1 188 56.9
AUR62024240 Chenopodium quinoa HOM05D003359 ORTHO05D004472 8.0e-56 220.7 189 56.1
Eucgr.H02478 Eucalyptus grandis HOM05D003359 ORTHO05D004472 8.0e-56 220.7 183 57.9
Prupe.1G247000 Prunus persica HOM05D003359 ORTHO05D004472 1.0e-55 220.3 184 60.3
THA.LOC104805279 Tarenaya hassleriana HOM05D003359 ORTHO05D004472 1.0e-55 220.3 186 57.0
Ca_25137_v3 Cicer arietinum L. HOM05D003359 ORTHO05D004472 2.3e-55 219.2 187 58.3
AT3G26380 Arabidopsis thaliana HOM05D003359 ORTHO05D004472 4.0e-55 218.4 185 59.5
CSS0009419 Camellia sinensis var. sinensis HOM05D003359 ORTHO05D004472 4.0e-55 218.4 187 56.1
CARHR147390 Cardamine hirsuta HOM05D003359 ORTHO05D004472 4.0e-55 218.4 185 58.4
Glyma.11G243600 Glycine max HOM05D003359 ORTHO05D004472 4.0e-55 218.4 187 59.4
Manes.13G022100 Manihot esculenta HOM05D003359 ORTHO05D004472 4.0e-55 218.4 188 58.0
Actinidia37443 Actinidia chinensis HOM05D003359 ORTHO05D004472 5.2e-55 218.0 183 57.9
Gohir.A03G133100 Gossypium hirsutum HOM05D003359 ORTHO05D004472 5.2e-55 218.0 187 56.7
Gorai.005G176600 Gossypium raimondii HOM05D003359 ORTHO05D004472 6.7e-55 217.6 187 56.7
Ciclev10033489m.g Citrus clementina HOM05D003359 ORTHO05D004472 8.8e-55 217.2 187 55.6
RcHm_v2.0_Chr4g0433401 Rosa chinensis HOM05D003359 ORTHO05D004472 8.8e-55 217.2 185 58.4
SalBow2G3613 Salvia bowleyana HOM05D003359 ORTHO05D004472 8.8e-55 217.2 187 57.8
TAR622G1186 Trochodendron aralioides HOM05D003359 ORTHO05D004472 1.1e-54 216.9 185 57.3
VMungo1383G0093 Vigna mungo HOM05D003359 ORTHO05D004472 1.1e-54 216.9 187 58.3
AL5G15150 Arabidopsis lyrata HOM05D003359 ORTHO05D004472 1.5e-54 216.5 185 58.4
Medtr3g086580 Medicago truncatula HOM05D003359 ORTHO05D004472 1.5e-54 216.5 185 57.8
GSVIVG01000554001 Vitis vinifera HOM05D003359 ORTHO05D005275 1.5e-54 216.5 187 57.2
Aqoxy5G03712 Aquilegia oxysepala HOM05D003359 ORTHO05D004472 2.0e-54 216.1 184 57.1
Sp2g15530 Schrenkiella parvula HOM05D003359 ORTHO05D004472 2.0e-54 216.1 185 58.4
AUR62005279 Chenopodium quinoa HOM05D003359 ORTHO05D004472 3.3e-54 215.3 189 56.1
SGA_v2.0_scaffold100G29574 Striga asiatica HOM05D003359 ORTHO05D004472 3.3e-54 215.3 187 56.7
Sc14g0008780 Simmondsia chinensis HOM05D003359 ORTHO05D004472 4.4e-54 214.9 184 57.6
BcaC03g17337 Brassica carinata HOM05D003359 ORTHO05D004472 5.7e-54 214.5 183 58.5
C02p52860 Brassica napus HOM05D003359 ORTHO05D004472 5.7e-54 214.5 183 58.5
BolC2t11365H Brassica oleracea HOM05D003359 ORTHO05D004472 5.7e-54 214.5 183 58.5
Lalb_Chr07g0185431 Lupinus albus HOM05D003359 ORTHO05D004472 5.7e-54 214.5 185 57.8
Nn4g22564 Nelumbo nucifera HOM05D003359 ORTHO05D004472 5.7e-54 214.5 187 56.1
Phvul.001G255500 Phaseolus vulgaris HOM05D003359 ORTHO05D004472 7.5e-54 214.2 185 58.9
vmacro16179 Vaccinium macrocarpon HOM05D003359 ORTHO05D004472 9.7e-54 213.8 183 55.7
Aa31LG2G6140 Aethionema arabicum HOM05D003359 ORTHO05D006537 1.3e-53 213.4 186 57.0
A02p34540 Brassica napus HOM05D003359 ORTHO05D004472 1.3e-53 213.4 185 57.3
BraA02t08464Z Brassica rapa HOM05D003359 ORTHO05D004472 1.3e-53 213.4 185 57.3
unitig_22.g6428 Utricularia gibba HOM05D003359 ORTHO05D004472 1.3e-53 213.4 185 56.8
Glyma.08G131400 Glycine max HOM05D003359 ORTHO05D004472 1.7e-53 213.0 186 55.9
Thhalv10003806m.g Eutrema salsugineum HOM05D003359 ORTHO05D004472 2.8e-53 212.2 185 57.8
Cc11_g15950 Coffea canephora HOM05D003359 ORTHO05D004472 4.8e-53 211.5 183 56.3
Glyma.05G174200 Glycine max HOM05D003359 ORTHO05D004472 4.8e-53 211.5 186 55.4
Nn3g16675 Nelumbo nucifera HOM05D003359 ORTHO05D004472 6.3e-53 211.1 183 56.3
PSO478G4543 Papaver somniferum HOM05D003359 ORTHO05D004472 6.3e-53 211.1 187 55.6
Potri.010G048400 Populus trichocarpa HOM05D003359 ORTHO05D004472 6.3e-53 211.1 187 56.1
Lj6C814T12 Lonicera japonica HOM05D003359 ORTHO05D004472 8.2e-53 210.7 187 55.6
Phvul.002G259200 Phaseolus vulgaris HOM05D003359 ORTHO05D004472 8.2e-53 210.7 186 55.4
Potri.010G048300 Populus trichocarpa HOM05D003359 ORTHO05D004472 1.1e-52 210.3 187 55.1
MD13G1098400 Malus domestica HOM05D003359 ORTHO05D004472 1.4e-52 209.9 185 55.7
BcaB07g30230 Brassica carinata HOM05D003359 ORTHO05D004472 1.8e-52 209.5 183 57.9
TPR.G30530 Trifolium pratense HOM05D003359 ORTHO05D004472 1.8e-52 209.5 185 57.3
MD16G1099400 Malus domestica HOM05D003359 ORTHO05D004472 2.4e-52 209.1 183 56.8
Aqoxy3G01254 Aquilegia oxysepala HOM05D003359 ORTHO05D004472 3.1e-52 208.8 185 55.7
Peaxi162Scf00128g00456 Petunia axillaris HOM05D003359 ORTHO05D004472 3.1e-52 208.8 183 55.2
Ciclev10003125m.g Citrus clementina HOM05D003359 ORTHO05D004472 4.1e-52 208.4 187 54.5
Sopen05g008640 Solanum pennellii HOM05D003359 ORTHO05D004472 4.1e-52 208.4 183 56.3
Aqoxy5G03710 Aquilegia oxysepala HOM05D003359 ORTHO05D004472 5.3e-52 208.0 188 53.2
arahy.Tifrunner.gnm1.ann1.9A08C8 Arachis hypogaea HOM05D003359 ORTHO05D004472 5.3e-52 208.0 189 54.0
Eucgr.H02477 Eucalyptus grandis HOM05D003359 ORTHO05D004472 5.3e-52 208.0 187 55.1
MD13G1098300 Malus domestica HOM05D003359 ORTHO05D004472 5.3e-52 208.0 189 56.1
CDE02G4268 Ceratophyllum demersum HOM05D003359 ORTHO05D004472 7.0e-52 207.6 187 54.5
MBI19_g09304_MAGBIO Magnolia biondii HOM05D003359 ORTHO05D004472 7.0e-52 207.6 190 53.7
arahy.Tifrunner.gnm1.ann1.6M8RVH Arachis hypogaea HOM05D003359 ORTHO05D004472 9.1e-52 207.2 187 54.5
PGSC0003DMG400011728 Solanum tuberosum HOM05D003359 ORTHO05D004472 9.1e-52 207.2 183 55.7
Lj6g0024639 Lotus japonicus HOM05D003359 ORTHO05D004472 1.2e-51 206.8 187 54.0
Psat5g091760 Pisum sativum HOM05D003359 ORTHO05D004472 1.2e-51 206.8 187 54.5
Sed0021427 Sechium edule HOM05D003359 ORTHO05D004472 1.2e-51 206.8 183 56.3
MELO3C010698.2 Cucumis melo HOM05D003359 ORTHO05D004472 2.0e-51 206.1 183 55.2
Medtr8g089725 Medicago truncatula HOM05D003359 ORTHO05D004472 2.0e-51 206.1 188 53.7
Medtr8g089735 Medicago truncatula HOM05D003359 ORTHO05D004472 2.0e-51 206.1 188 53.7
Solyc05g013720.3 Solanum lycopersicum HOM05D003359 ORTHO05D004472 2.0e-51 206.1 183 55.2
Medtr8g089745 Medicago truncatula HOM05D003359 ORTHO05D004472 3.5e-51 205.3 185 55.7
arahy.Tifrunner.gnm1.ann1.5678GR Arachis hypogaea HOM05D003359 ORTHO05D004472 4.5e-51 204.9 188 53.2
Psat7g058680 Pisum sativum HOM05D003359 ORTHO05D004472 4.5e-51 204.9 188 53.2
SGA_v2.0_scaffold71G23972 Striga asiatica HOM05D003359 ORTHO05D004472 4.5e-51 204.9 183 54.6
Potri.008G185300 Populus trichocarpa HOM05D003359 ORTHO05D004472 5.9e-51 204.5 187 55.1
TWI36G0326 Tripterygium wilfordii HOM05D003359 ORTHO05D004472 5.9e-51 204.5 180 55.0
PSO067G0007 Papaver somniferum HOM05D003359 ORTHO05D004472 7.7e-51 204.1 183 54.1
CAN.G272.4 Capsicum annuum HOM05D003359 ORTHO05D004472 1.0e-50 203.8 183 54.1
ECA233G4229 Erigeron canadensis HOM05D003359 ORTHO05D004472 1.3e-50 203.4 184 54.9
Lalb_Chr23g0277621 Lupinus albus HOM05D003359 ORTHO05D004472 1.3e-50 203.4 185 55.1
Medtr2g096530 Medicago truncatula HOM05D003359 ORTHO05D004472 1.3e-50 203.4 188 53.7
CsaV3_2G025010 Cucumis sativus L. HOM05D003359 ORTHO05D004472 2.2e-50 202.6 183 54.6
FAN07G2501 Fragaria x ananassa HOM05D003359 ORTHO05D004472 2.2e-50 202.6 185 54.6
HanXRQChr08g0208381 Helianthus annuus HOM05D003359 ORTHO05D004472 2.2e-50 202.6 191 53.4
Sabra10G0020500 Salix brachista HOM05D003359 ORTHO05D006537 2.2e-50 202.6 205 50.7
FvH4_4g25930 Fragaria vesca HOM05D003359 ORTHO05D004472 2.9e-50 202.2 185 54.6
DCAR_029363 Daucus carota HOM05D003359 ORTHO05D004472 3.8e-50 201.8 189 55.0
Lj4g0008357 Lotus japonicus HOM05D003359 ORTHO05D004472 6.5e-50 201.1 191 55.0
arahy.Tifrunner.gnm1.ann1.JIIR6A Arachis hypogaea HOM05D003359 ORTHO05D004472 8.5e-50 200.7 185 53.0
ClCG08G017630 Citrullus lanatus HOM05D003359 ORTHO05D004472 1.1e-49 200.3 193 53.9
TPR.G6291 Trifolium pratense HOM05D003359 ORTHO05D004472 1.5e-49 199.9 189 52.9
Lsat_1_v5_gn_8_152721 Lactuca sativa HOM05D003359 ORTHO05D004472 1.9e-49 199.5 184 55.4
TWI36G1577 Tripterygium wilfordii HOM05D003359 ORTHO05D004472 2.5e-49 199.1 185 52.4
Medtr8g089740 Medicago truncatula HOM05D003359 ORTHO05D004472 1.2e-48 196.8 186 53.8
ATR0824G097 Amborella trichopoda HOM05D003359 ORTHO05D004472 2.1e-48 196.1 183 52.5
TPR.G6223 Trifolium pratense HOM05D003359 ORTHO05D004472 2.1e-48 196.1 188 52.7
Sabra08G0140300 Salix brachista HOM05D003359 ORTHO05D006537 2.7e-48 195.7 155 60.6
SEGI_05831 Sequoiadendron giganteum HOM05D003359 ORTHO05D004472 4.7e-48 194.9 182 52.7
FAN05G1630 Fragaria x ananassa HOM05D003359 ORTHO05D004472 8.0e-48 194.1 188 52.7
FAN05G3491 Fragaria x ananassa HOM05D003359 ORTHO05D004472 8.0e-48 194.1 188 52.7
FAN14G5485 Fragaria x ananassa HOM05D003359 ORTHO05D004472 8.0e-48 194.1 188 52.7
Ca_17782_v3 Cicer arietinum L. HOM05D003359 ORTHO05D004472 1.8e-47 193.0 186 52.2
FAN12G2341 Fragaria x ananassa HOM05D003359 ORTHO05D004472 1.8e-47 193.0 198 51.0
FAN12G3248 Fragaria x ananassa HOM05D003359 ORTHO05D004472 1.8e-47 193.0 198 51.0
HPP92_023373 Vanilla planifolia HOM05D003359 ORTHO05D004472 2.3e-47 192.6 191 48.2
FAN14G4241 Fragaria x ananassa HOM05D003359 ORTHO05D004472 4.0e-47 191.8 186 52.7
FvH4_6g05560 Fragaria vesca HOM05D003359 ORTHO05D004472 8.8e-47 190.7 186 52.2
Nitab4.5_0002787g0030 Nicotiana tabacum HOM05D003359 ORTHO05D004472 8.8e-47 190.7 187 52.4
FAN09G1504 Fragaria x ananassa HOM05D003359 ORTHO05D004472 1.2e-46 190.3 186 52.2
SEGI_37368 Sequoiadendron giganteum HOM05D003359 ORTHO05D004472 9.8e-46 187.2 187 49.2
Glyma.14G049900 Glycine max HOM05D003359 ORTHO05D004472 4.8e-45 184.9 188 49.5
SEGI_30194 Sequoiadendron giganteum HOM05D003359 ORTHO05D004472 1.4e-44 183.3 184 50.0
RcHm_v2.0_Chr3g0454341 Rosa chinensis HOM05D003359 ORTHO05D004472 3.1e-44 182.2 186 51.1
Os01g0518500 Oryza sativa ssp. japonica HOM05D003359 ORTHO05D004472 1.2e-43 180.3 185 47.0
Lalb_Chr04g0250081 Lupinus albus HOM05D003359 ORTHO05D004472 5.9e-43 177.9 189 50.8
AagrBONN_evm.TU.Sc2ySwM_362.590 Anthoceros agrestis HOM05D003359 ORTHO05D004472 1.0e-42 177.2 180 50.0
SMO356G0596 Selaginella moellendorffii HOM05D003359 ORTHO05D004472 1.7e-42 176.4 176 48.3
SMO164G0149 Selaginella moellendorffii HOM05D003359 ORTHO05D004472 5.0e-42 174.9 176 48.3
ATR0824G255 Amborella trichopoda HOM05D003359 ORTHO05D004472 1.2e-40 170.2 182 46.2
AagrBONN_evm.TU.Sc2ySwM_228.5836 Anthoceros agrestis HOM05D003359 ORTHO05D004472 6.1e-40 167.9 183 44.8
Atru.chr11.2161 Acer truncatum HOM05D003359 ORTHO05D004472 1.0e-39 167.2 145 57.9
Pp3c11_18080 Physcomitrium patens HOM05D003359 ORTHO05D004472 1.8e-39 166.4 182 46.2
Mapoly0033s0125 Marchantia polymorpha HOM05D003359 ORTHO05D004472 8.8e-39 164.1 182 44.5
LjContig00029g0017310 Lotus japonicus HOM05D003359 ORTHO05D004472 3.4e-38 162.2 190 46.8
SMO238G0039 Selaginella moellendorffii HOM05D003359 ORTHO05D004472 9.8e-38 160.6 184 42.4
Mapoly0016s0175 Marchantia polymorpha HOM05D003359 ORTHO05D004472 4.9e-37 158.3 176 45.5
SMO147G0306 Selaginella moellendorffii HOM05D003359 ORTHO05D004472 1.1e-36 157.1 176 43.2
Nitab4.5_0000229g0100 Nicotiana tabacum HOM05D003359 ORTHO05D004472 2.0e-35 152.9 144 52.8
Phvul.008G214500 Phaseolus vulgaris HOM05D003359 ORTHO05D004472 1.7e-34 149.8 171 46.8
Lj3A1060T75 Lonicera japonica HOM05D003359 ORTHO05D004472 3.8e-34 148.7 143 52.4
Hund06039 Selenicereus undatus HOM05D003359 ORTHO05D004472 4.3e-33 145.2 144 53.5
Cfa009233 Carpinus fangiana HOM05D003359 ORTHO05D004472 9.5e-33 144.1 134 55.2
Haze_12269 Corylus avellana HOM05D003359 ORTHO05D006537 9.5e-33 144.1 134 55.2
Haze_07805 Corylus avellana HOM05D003359 ORTHO05D004472 2.1e-32 142.9 133 55.6
VMungo0647G2422 Vigna mungo HOM05D003359 ORTHO05D000417 2.1e-32 142.9 188 42.6
PSO017G3539 Papaver somniferum HOM05D003359 ORTHO05D004472 4.7e-32 141.7 85 71.8
HPP92_023360 Vanilla planifolia HOM05D003359 ORTHO05D004472 1.0e-31 140.6 144 47.9
Lalb_Chr04g0250041 Lupinus albus HOM05D003359 ORTHO05D004472 8.9e-31 137.5 100 65.0
Oeu057546.1 Olea europaea HOM05D003359 ORTHO05D004472 8.9e-31 137.5 134 51.5
Lalb_Chr04g0250061 Lupinus albus HOM05D003359 ORTHO05D004472 2.0e-30 136.3 100 65.0
HPP92_023372 Vanilla planifolia HOM05D003359 ORTHO05D004472 2.2e-29 132.9 149 45.6
Gohir.D02G157400 Gossypium hirsutum HOM05D003359 ORTHO05D004472 1.4e-28 130.2 133 50.4
FAN04G1499 Fragaria x ananassa HOM05D003359 ORTHO05D004472 1.6e-27 126.7 78 71.8
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 2.1e-24 116.3 92 60.9
Glyma.02G267700 Glycine max HOM05D003359 ORTHO05D004472 4.1e-20 102.1 119 44.5
Zm00001eb409230 Zea mays HOM05D003359 ORTHO05D004472 2.7e-19 99.4 126 42.1
FAN12G0307 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.6e-18 94.4 86 55.8
Lj3C275T6 Lonicera japonica HOM05D003359 ORTHO05D004472 4.4e-14 82.0 142 35.9
Aqoxy515s001 Aquilegia oxysepala HOM05D003359 ORTHO05D004472 7.5e-14 81.3 63 63.5
PSO017G1803 Papaver somniferum HOM05D003359 ORTHO05D004472 2.2e-13 79.7 70 55.7
Cc01_g04790 Coffea canephora HOM05D003359 ORTHO05D004472 3.5e-11 72.4 84 44.0
Lalb_Chr04g0250101 Lupinus albus HOM05D003359 ORTHO05D004472 1.7e-10 70.1 57 57.9
Lalb_Chr04g0250091 Lupinus albus HOM05D003359 ORTHO05D004472 6.6e-10 68.2 54 59.3
VMungo1383G2745 Vigna mungo HOM05D003359 ORTHO05D005153 1.6e-08 63.5 57 50.9


User provided reference genes

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