Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p032920 Quercus lobata HOM05D002281 ORTHO05D006774 8.7e-131 470.3 237 100.0
QL03p033074 Quercus lobata HOM05D002281 ORTHO05D006774 2.8e-44 183.0 102 94.1
Haze_04484 Corylus avellana HOM05D002281 ORTHO05D006774 4.4e-42 175.6 102 88.2
Cfa006305 Carpinus fangiana HOM05D002281 ORTHO05D006774 2.9e-41 172.9 100 88.0
CiPaw.07G076900 Carya illinoinensis HOM05D002281 ORTHO05D006774 1.1e-40 171.0 110 80.9
GSVIVG01026351001 Vitis vinifera HOM05D002281 ORTHO05D006774 2.4e-40 169.9 136 66.9
CAN.G131.14 Capsicum annuum HOM05D002281 ORTHO05D006774 1.6e-39 167.2 102 83.3
Dinv05783 Davidia involucrata HOM05D002281 ORTHO05D006774 2.0e-39 166.8 105 81.9
Gohir.A13G103100 Gossypium hirsutum HOM05D002281 ORTHO05D006774 2.7e-39 166.4 109 78.0
ClCG03G011380 Citrullus lanatus HOM05D002281 ORTHO05D006774 3.5e-39 166.0 102 84.3
Atru.chr2.1137 Acer truncatum HOM05D002281 ORTHO05D006774 4.6e-39 165.6 111 79.3
PGR142G3453 Punica granatum HOM05D002281 ORTHO05D006774 6.0e-39 165.2 106 80.2
Cpa.g.sc51.36 Carica papaya HOM05D002281 ORTHO05D006774 7.8e-39 164.9 103 80.6
Gohir.D13G106200 Gossypium hirsutum HOM05D002281 ORTHO05D006774 7.8e-39 164.9 109 77.1
Nn3g19861 Nelumbo nucifera HOM05D002281 ORTHO05D006774 7.8e-39 164.9 107 78.5
Solyc04g050540.4 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.3e-38 164.1 106 79.2
MELO3C010108.2 Cucumis melo HOM05D002281 ORTHO05D006774 1.7e-38 163.7 117 75.2
Gorai.013G119100 Gossypium raimondii HOM05D002281 ORTHO05D006774 2.3e-38 163.3 109 77.1
CANSAT54G2391 Cannabis sativa HOM05D002281 ORTHO05D006774 3.0e-38 162.9 136 66.2
Actinidia06827 Actinidia chinensis HOM05D002281 ORTHO05D006774 3.9e-38 162.5 109 76.1
TWI60G1049 Tripterygium wilfordii HOM05D002281 ORTHO05D006774 3.9e-38 162.5 110 77.3
CSS0040843 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 5.0e-38 162.2 109 75.2
Sopen04g021370 Solanum pennellii HOM05D002281 ORTHO05D006774 5.0e-38 162.2 102 80.4
Thecc.05G264900 Theobroma cacao HOM05D002281 ORTHO05D006774 5.0e-38 162.2 109 74.3
Peaxi162Scf00071g00258 Petunia axillaris HOM05D002281 ORTHO05D006774 6.6e-38 161.8 102 80.4
Migut.F02048 Erythranthe guttata HOM05D002281 ORTHO05D006774 8.6e-38 161.4 110 75.5
Eucgr.B02168 Eucalyptus grandis HOM05D002281 ORTHO05D006774 8.6e-38 161.4 133 66.2
AUR62000641 Chenopodium quinoa HOM05D002281 ORTHO05D006774 1.1e-37 161.0 102 83.3
AUR62006996 Chenopodium quinoa HOM05D002281 ORTHO05D006774 1.1e-37 161.0 102 83.3
Nitab4.5_0006530g0020 Nicotiana tabacum HOM05D002281 ORTHO05D006774 1.1e-37 161.0 102 80.4
vmacro19967 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 1.1e-37 161.0 104 81.7
CsaV3_1G044940 Cucumis sativus L. HOM05D002281 ORTHO05D006774 1.5e-37 160.6 102 82.4
Nitab4.5_0001498g0040 Nicotiana tabacum HOM05D002281 ORTHO05D006774 1.5e-37 160.6 132 66.7
BcaC09g47811 Brassica carinata HOM05D002281 ORTHO05D006774 1.9e-37 160.2 99 82.8
BcaNung04817 Brassica carinata HOM05D002281 ORTHO05D006774 1.9e-37 160.2 99 82.8
Ciclev10023441m.g Citrus clementina HOM05D002281 ORTHO05D006774 2.5e-37 159.8 110 75.5
Aqoxy2G03815 Aquilegia oxysepala HOM05D002281 ORTHO05D006774 3.3e-37 159.5 105 76.2
Cc00_g32050 Coffea canephora HOM05D002281 ORTHO05D006774 4.3e-37 159.1 108 75.9
Thhalv10020015m.g Eutrema salsugineum HOM05D002281 ORTHO05D006774 4.3e-37 159.1 99 81.8
Sed0014107 Sechium edule HOM05D002281 ORTHO05D006774 4.3e-37 159.1 102 80.4
AT3G04260 Arabidopsis thaliana HOM05D002281 ORTHO05D006774 5.6e-37 158.7 99 81.8
Sp3g03170 Schrenkiella parvula HOM05D002281 ORTHO05D006774 5.6e-37 158.7 99 81.8
Carub.0003s0347 Capsella rubella HOM05D002281 ORTHO05D006774 7.3e-37 158.3 99 80.8
AL3G14240 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 9.5e-37 157.9 99 80.8
CARHR078410 Cardamine hirsuta HOM05D002281 ORTHO05D006774 9.5e-37 157.9 103 79.6
MD04G1234900 Malus domestica HOM05D002281 ORTHO05D006774 9.5e-37 157.9 99 79.8
Manes.09G145600 Manihot esculenta HOM05D002281 ORTHO05D006774 9.5e-37 157.9 102 76.5
DCAR_027530 Daucus carota HOM05D002281 ORTHO05D006774 1.2e-36 157.5 106 76.4
FvH4_6g01350 Fragaria vesca HOM05D002281 ORTHO05D006774 1.2e-36 157.5 99 80.8
Potri.019G025100 Populus trichocarpa HOM05D002281 ORTHO05D006774 1.2e-36 157.5 110 74.5
Sabra19G0037700 Salix brachista HOM05D002281 ORTHO05D006774 1.2e-36 157.5 103 78.6
AL685U10020 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 2.1e-36 156.8 99 81.8
RcHm_v2.0_Chr3g0448921 Rosa chinensis HOM05D002281 ORTHO05D006774 2.1e-36 156.8 99 80.8
BraA01t04526Z Brassica rapa HOM05D002281 ORTHO05D006774 2.8e-36 156.4 91 87.9
Sabra19G0034700 Salix brachista HOM05D002281 ORTHO05D006774 3.6e-36 156.0 103 77.7
Hund07166 Selenicereus undatus HOM05D002281 ORTHO05D006774 3.6e-36 156.0 102 78.4
MSTRG.27429 Avicennia marina HOM05D002281 ORTHO05D006774 6.2e-36 155.2 110 72.7
Sc16g0010030 Simmondsia chinensis HOM05D002281 ORTHO05D006774 6.2e-36 155.2 107 76.6
Aa31LG5G14740 Aethionema arabicum HOM05D002281 ORTHO05D006774 8.0e-36 154.8 91 86.8
VMungo0720G2591 Vigna mungo HOM05D002281 ORTHO05D006774 1.1e-35 154.5 102 76.5
ECA238G3638 Erigeron canadensis HOM05D002281 ORTHO05D006774 1.4e-35 154.1 102 77.5
ATR0787G153 Amborella trichopoda HOM05D002281 ORTHO05D006774 1.8e-35 153.7 107 72.0
CDE02G2074 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 2.3e-35 153.3 125 63.2
Lalb_Chr21g0311311 Lupinus albus HOM05D002281 ORTHO05D006774 3.1e-35 152.9 101 76.2
Glyma.10G168600 Glycine max HOM05D002281 ORTHO05D006774 4.0e-35 152.5 106 72.6
PSO063G1810 Papaver somniferum HOM05D002281 ORTHO05D006774 4.0e-35 152.5 98 80.6
Phvul.L002432 Phaseolus vulgaris HOM05D002281 ORTHO05D006774 4.0e-35 152.5 106 72.6
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 5.2e-35 152.1 91 83.5
HanXRQChr14g0434631 Helianthus annuus HOM05D002281 ORTHO05D006774 5.2e-35 152.1 99 77.8
Lj2C48G13 Lonicera japonica HOM05D002281 ORTHO05D006774 5.2e-35 152.1 109 70.6
Oeu001246.1 Olea europaea HOM05D002281 ORTHO05D006774 5.2e-35 152.1 109 71.6
PSO017G1794 Papaver somniferum HOM05D002281 ORTHO05D006774 5.2e-35 152.1 98 79.6
Glyma.20G221100 Glycine max HOM05D002281 ORTHO05D006774 6.8e-35 151.8 106 73.6
SGA_v2.0_scaffold62G21474 Striga asiatica HOM05D002281 ORTHO05D006774 6.8e-35 151.8 109 71.6
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 1.2e-34 151.0 92 81.5
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 1.2e-34 151.0 92 81.5
Prupe.6G354700 Prunus persica HOM05D002281 ORTHO05D006774 1.2e-34 151.0 89 83.1
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 1.5e-34 150.6 86 87.2
arahy.Tifrunner.gnm1.ann1.76MSW2 Arachis hypogaea HOM05D002281 ORTHO05D006774 2.0e-34 150.2 95 78.9
arahy.Tifrunner.gnm1.ann1.BY82ZN Arachis hypogaea HOM05D002281 ORTHO05D006774 2.0e-34 150.2 95 78.9
Lsat_1_v5_gn_2_16580 Lactuca sativa HOM05D002281 ORTHO05D006774 2.0e-34 150.2 109 71.6
Medtr1g079525 Medicago truncatula HOM05D002281 ORTHO05D006774 2.0e-34 150.2 133 61.7
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 2.6e-34 149.8 85 88.2
THA.LOC104820754 Tarenaya hassleriana HOM05D002281 ORTHO05D006774 3.4e-34 149.4 99 78.8
Ca_09982_v3 Cicer arietinum L. HOM05D002281 ORTHO05D006774 5.8e-34 148.7 106 71.7
COL.COLO4_38180 Corchorus olitorius HOM05D002281 ORTHO05D006774 5.8e-34 148.7 97 77.3
TAR365G0274 Trochodendron aralioides HOM05D002281 ORTHO05D006774 5.8e-34 148.7 107 74.8
Psat6g141840 Pisum sativum HOM05D002281 ORTHO05D006774 7.5e-34 148.3 107 72.0
Os10g0462800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D006774 3.7e-33 146.0 99 71.7
Zm00001eb046590 Zea mays HOM05D002281 ORTHO05D006774 3.7e-33 146.0 99 69.7
Lj5g0010111 Lotus japonicus HOM05D002281 ORTHO05D006774 6.4e-33 145.2 102 70.6
TPR.G31600 Trifolium pratense HOM05D002281 ORTHO05D006774 9.2e-32 141.4 113 65.5
unitig_899.g14420 Utricularia gibba HOM05D002281 ORTHO05D006774 6.0e-31 138.7 108 65.7
HPP92_025553 Vanilla planifolia HOM05D002281 ORTHO05D006774 1.1e-29 134.4 92 73.9
SEGI_16679 Sequoiadendron giganteum HOM05D002281 ORTHO05D006774 4.7e-28 129.0 91 69.2
AagrBONN_evm.TU.Sc2ySwM_368.3437 Anthoceros agrestis HOM05D002281 ORTHO05D006774 1.6e-20 104.0 94 50.0
Mapoly0031s0123 Marchantia polymorpha HOM05D002281 ORTHO05D006774 2.0e-18 97.1 91 48.4
SMO367G1266 Selaginella moellendorffii HOM05D002281 ORTHO05D006774 6.4e-17 92.0 124 36.3
Pp3c1_8170 Physcomitrium patens HOM05D002281 ORTHO05D006774 1.9e-16 90.5 104 45.2
FAN14G5351 Fragaria x ananassa HOM05D002281 ORTHO05D006774 4.2e-16 89.4 65 76.9
EL10Ac4g09786 Beta vulgaris HOM05D002281 ORTHO05D006774 1.7e-14 84.0 64 70.3
BolC1t05755H Brassica oleracea HOM05D002281 ORTHO05D006774 1.7e-14 84.0 50 86.0
Hma1.2p1_0123F.1_g058110 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 6.6e-14 82.0 52 73.1
CBR_g7996 Chara braunii HOM05D002281 ORTHO05D006774 1.3e-12 77.8 94 41.5
BraA01t04528Z Brassica rapa HOM05D002281 ORTHO05D006774 3.2e-08 63.2 49 71.4
BolC1t05758H Brassica oleracea HOM05D002281 ORTHO05D006774 4.2e-08 62.8 42 76.2
Actinidia39977 Actinidia chinensis HOM05D002281 ORTHO05D006774 1.6e-07 60.8 40 70.0


User provided reference genes

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