Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p003473 Quercus lobata HOM05D003614 ORTHO05D004156 4.3e-275 950.7 462 100.0
QL07p006066 Quercus lobata HOM05D003614 ORTHO05D004156 1.7e-223 779.2 658 65.2
QL07p005711 Quercus lobata HOM05D003614 ORTHO05D004156 1.4e-222 776.2 658 64.9
Cfa016733 Carpinus fangiana HOM05D003614 ORTHO05D004156 3.6e-197 691.8 658 58.5
Haze_19741 Corylus avellana HOM05D003614 ORTHO05D004156 8.8e-196 687.2 658 58.4
CiPaw.09G043900 Carya illinoinensis HOM05D003614 ORTHO05D004156 2.2e-194 682.6 658 57.6
TWI74G0330 Tripterygium wilfordii HOM05D003614 ORTHO05D004156 4.9e-170 601.7 658 50.9
COL.COLO4_33914 Corchorus olitorius HOM05D003614 ORTHO05D004156 7.0e-169 597.8 660 50.8
MD12G1089700 Malus domestica HOM05D003614 ORTHO05D004156 9.2e-169 597.4 658 51.5
RcHm_v2.0_Chr2g0124831 Rosa chinensis HOM05D003614 ORTHO05D004156 5.0e-167 591.7 658 50.8
CANSAT54G1064 Cannabis sativa HOM05D003614 ORTHO05D004156 1.1e-166 590.5 659 50.1
Dinv00797 Davidia involucrata HOM05D003614 ORTHO05D004156 1.1e-166 590.5 659 50.8
TAR580G0003 Trochodendron aralioides HOM05D003614 ORTHO05D004156 2.5e-166 589.3 658 50.9
vmacro23496 Vaccinium macrocarpon HOM05D003614 ORTHO05D004156 3.6e-165 585.5 592 53.7
Duzib128G0580 Durio zibethinus HOM05D003614 ORTHO05D004156 1.4e-164 583.6 646 50.2
Actinidia39178 Actinidia chinensis HOM05D003614 ORTHO05D004156 1.2e-163 580.5 626 52.4
Atru.chr1.1276 Acer truncatum HOM05D003614 ORTHO05D004156 7.5e-163 577.8 648 50.0
CSS0031196 Camellia sinensis var. sinensis HOM05D003614 ORTHO05D004156 1.3e-162 577.0 657 49.6
Potri.006G043650 Populus trichocarpa HOM05D003614 ORTHO05D004156 6.4e-162 574.7 658 50.2
Manes.08G056200 Manihot esculenta HOM05D003614 ORTHO05D004156 1.1e-161 573.9 658 49.8
Sabra06G0029800 Salix brachista HOM05D003614 ORTHO05D004156 1.1e-161 573.9 658 50.0
FAN14G1287 Fragaria x ananassa HOM05D003614 ORTHO05D004156 2.5e-158 562.8 659 49.8
ClCG10G005410 Citrullus lanatus HOM05D003614 ORTHO05D004156 3.3e-158 562.4 660 48.6
FvH4_6g25070 Fragaria vesca HOM05D003614 ORTHO05D004156 3.3e-158 562.4 659 49.8
FAN02G3060 Fragaria x ananassa HOM05D003614 ORTHO05D004156 3.3e-158 562.4 659 49.8
FAN09G2704 Fragaria x ananassa HOM05D003614 ORTHO05D004156 9.5e-158 560.8 659 49.6
MELO3C025378.2 Cucumis melo HOM05D003614 ORTHO05D004156 1.2e-157 560.5 660 48.8
Rhsim03G0033800 Rhododendron simsii HOM05D003614 ORTHO05D004156 1.2e-157 560.5 656 47.9
CsaV3_3G005150 Cucumis sativus L. HOM05D003614 ORTHO05D004156 4.7e-157 558.5 660 48.3
Sed0022963 Sechium edule HOM05D003614 ORTHO05D004156 4.7e-157 558.5 660 48.9
Ca_02700_v3 Cicer arietinum L. HOM05D003614 ORTHO05D004156 1.0e-156 557.4 659 47.0
PGR142G0250 Punica granatum HOM05D003614 ORTHO05D004156 4.4e-155 552.0 660 47.7
Dinv04144 Davidia involucrata HOM05D003614 ORTHO05D004156 5.8e-155 551.6 660 49.1
TPR.G13793 Trifolium pratense HOM05D003614 ORTHO05D004156 1.3e-154 550.4 636 47.6
Glyma.16G116350 Glycine max HOM05D003614 ORTHO05D004156 7.0e-153 544.7 660 47.3
Glyma.16G222000 Glycine max HOM05D003614 ORTHO05D004156 3.5e-152 542.3 659 47.0
THA.LOC104823214 Tarenaya hassleriana HOM05D003614 ORTHO05D004156 6.0e-152 541.6 659 45.8
Oeu008197.1 Olea europaea HOM05D003614 ORTHO05D004156 7.8e-152 541.2 659 46.4
Aa31LG1G21260 Aethionema arabicum HOM05D003614 ORTHO05D004156 5.0e-151 538.5 659 46.4
arahy.Tifrunner.gnm1.ann1.MR16VB Arachis hypogaea HOM05D003614 ORTHO05D004156 6.6e-151 538.1 660 46.5
arahy.Tifrunner.gnm1.ann1.P66LNP Arachis hypogaea HOM05D003614 ORTHO05D004156 6.6e-151 538.1 660 46.5
Sp6g38700 Schrenkiella parvula HOM05D003614 ORTHO05D004156 1.9e-150 536.6 660 46.5
AL6G13670 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 2.5e-150 536.2 660 46.4
MBI14_g19444_MAGBIO Magnolia biondii HOM05D003614 ORTHO05D004156 3.3e-150 535.8 648 45.7
QL03p003469 Quercus lobata HOM05D003614 ORTHO05D004156 2.8e-149 532.7 259 100.0
Psat6g087880 Pisum sativum HOM05D003614 ORTHO05D004156 3.1e-148 529.3 657 45.7
Nn1g04314 Nelumbo nucifera HOM05D003614 ORTHO05D004156 4.4e-147 525.4 636 46.4
BraA10t45251Z Brassica rapa HOM05D003614 ORTHO05D004156 5.8e-147 525.0 657 46.4
Thhalv10012522m.g Eutrema salsugineum HOM05D003614 ORTHO05D004156 8.3e-146 521.2 660 45.8
DCAR_016966 Daucus carota HOM05D003614 ORTHO05D004156 1.4e-145 520.4 658 45.3
PGSC0003DMG400022532 Solanum tuberosum HOM05D003614 ORTHO05D004156 3.2e-145 519.2 653 44.4
A10p32060 Brassica napus HOM05D003614 ORTHO05D004156 7.1e-145 518.1 657 46.1
Aqoxy5G04186 Aquilegia oxysepala HOM05D003614 ORTHO05D004156 4.6e-144 515.4 654 45.1
C09p72780 Brassica napus HOM05D003614 ORTHO05D004156 6.0e-144 515.0 658 46.2
BolC9t60016H Brassica oleracea HOM05D003614 ORTHO05D004156 6.0e-144 515.0 658 46.2
Carub.0006s0300 Capsella rubella HOM05D003614 ORTHO05D004156 6.0e-144 515.0 660 45.0
GSVIVG01033568001 Vitis vinifera HOM05D003614 ORTHO05D004156 7.8e-144 514.6 623 47.5
CAN.G1237.32 Capsicum annuum HOM05D003614 ORTHO05D004156 8.6e-143 511.1 657 43.5
PSO017G5444 Papaver somniferum HOM05D003614 ORTHO05D004156 8.6e-143 511.1 653 44.9
Sc13g0001410 Simmondsia chinensis HOM05D003614 ORTHO05D004156 3.3e-142 509.2 658 44.1
QL07p006290 Quercus lobata HOM05D003614 ORTHO05D004156 2.1e-141 506.5 507 57.6
Rhsim10G0199100 Rhododendron simsii HOM05D003614 ORTHO05D004156 3.6e-141 505.8 621 46.7
VMungo0720G1667 Vigna mungo HOM05D003614 ORTHO05D004156 9.9e-139 497.7 629 47.1
Sopen03g006270 Solanum pennellii HOM05D003614 ORTHO05D004156 1.9e-137 493.4 653 43.0
Nitab4.5_0010525g0010 Nicotiana tabacum HOM05D003614 ORTHO05D004156 5.4e-137 491.9 616 44.8
BcaC06g32109 Brassica carinata HOM05D003614 ORTHO05D004156 1.0e-135 487.6 657 44.3
ATR0580G046 Amborella trichopoda HOM05D003614 ORTHO05D004156 3.0e-135 486.1 653 42.6
Nitab4.5_0005031g0070 Nicotiana tabacum HOM05D003614 ORTHO05D004156 6.6e-135 485.0 616 44.2
SHI03570 Sapria himalayana HOM05D003614 ORTHO05D004156 3.1e-132 476.1 641 43.7
Ah.13g076640 Amaranthus hybridus HOM05D003614 ORTHO05D004156 8.4e-130 468.0 660 41.5
ECA248G3258 Erigeron canadensis HOM05D003614 ORTHO05D004156 1.2e-128 464.2 671 41.1
Lj1P1115T19 Lonicera japonica HOM05D003614 ORTHO05D004156 3.9e-127 459.1 594 44.1
VMungo0331G0942 Vigna mungo HOM05D003614 ORTHO05D004156 2.1e-125 453.4 659 43.2
Prupe.7G047200 Prunus persica HOM05D003614 ORTHO05D004156 4.9e-122 442.2 550 46.0
EL10Ac3g07183 Beta vulgaris HOM05D003614 ORTHO05D004156 3.2e-121 439.5 617 41.0
QL07p006078 Quercus lobata HOM05D003614 ORTHO05D004156 7.9e-120 434.9 295 75.9
SGA_v2.0_scaffold94G28503 Striga asiatica HOM05D003614 ORTHO05D004156 1.5e-118 430.6 661 37.8
Lsat_1_v5_gn_5_158800 Lactuca sativa HOM05D003614 ORTHO05D004156 4.0e-116 422.5 658 38.8
QL03p003467 Quercus lobata HOM05D003614 ORTHO05D004156 1.3e-114 417.5 202 99.5
Peaxi162Scf00130g01210 Petunia axillaris HOM05D003614 ORTHO05D004156 2.4e-113 413.3 587 42.4
SEGI_09252 Sequoiadendron giganteum HOM05D003614 ORTHO05D004156 2.1e-109 400.2 688 35.6
AUR62037179 Chenopodium quinoa HOM05D003614 ORTHO05D004156 6.9e-108 395.2 629 38.5
Lalb_Chr02g0142191 Lupinus albus HOM05D003614 ORTHO05D004156 5.8e-107 392.1 571 41.3
Zm00001eb274760 Zea mays HOM05D003614 ORTHO05D004156 4.2e-97 359.4 634 35.6
unitig_748.g7231 Utricularia gibba HOM05D003614 ORTHO05D004156 1.6e-96 357.5 600 35.5
QL03p003747 Quercus lobata HOM05D003614 ORTHO05D004156 5.9e-91 339.0 223 78.9
AT5G04050 Arabidopsis thaliana HOM05D003614 ORTHO05D004156 2.5e-89 333.6 476 42.6
Cpa.g.sc161.31 Carica papaya HOM05D003614 ORTHO05D004156 1.2e-83 314.7 531 40.9
Solyc03g033520.2 Solanum lycopersicum HOM05D003614 ORTHO05D004156 1.5e-83 314.3 295 53.6
AUR62026155 Chenopodium quinoa HOM05D003614 ORTHO05D004156 3.0e-79 300.1 543 35.7
HanXRQChr13g0395821 Helianthus annuus HOM05D003614 ORTHO05D004156 1.4e-76 291.2 294 50.3
VMungo1127G0235 Vigna mungo HOM05D003614 ORTHO05D004156 2.7e-67 260.4 206 65.5
QL11p043104 Quercus lobata HOM05D003614 ORTHO05D004156 3.1e-60 236.9 193 68.9
HPP92_012753 Vanilla planifolia HOM05D003614 ORTHO05D004156 5.5e-57 226.1 456 33.1
QL11p043133 Quercus lobata HOM05D003614 ORTHO05D004156 6.6e-50 202.6 261 49.4
Os06g0659200 Oryza sativa ssp. japonica HOM05D003614 ORTHO05D004156 4.0e-47 193.4 139 61.9
Lj1C1119T2 Lonicera japonica HOM05D003614 ORTHO05D004156 4.4e-38 163.3 108 67.6
Haze_25257 Corylus avellana HOM05D003614 ORTHO05D004156 2.6e-30 137.5 182 37.9
Cfa002904 Carpinus fangiana HOM05D003614 ORTHO05D004156 2.2e-29 134.4 184 39.7
PGR119G0394 Punica granatum HOM05D003614 ORTHO05D004156 6.4e-29 132.9 650 23.1
Phvul.003G215300 Phaseolus vulgaris HOM05D003614 ORTHO05D004156 8.3e-29 132.5 650 23.5
Lalb_Chr21g0312211 Lupinus albus HOM05D003614 ORTHO05D004156 2.4e-28 131.0 653 23.1
ATR0691G002 Amborella trichopoda HOM05D003614 ORTHO05D004156 3.2e-28 130.6 182 37.9
Lj4C836G14 Lonicera japonica HOM05D003614 ORTHO05D004156 4.1e-28 130.2 170 37.6
Prupe.2G034000 Prunus persica HOM05D003614 ORTHO05D004156 4.1e-28 130.2 173 37.6
SEGI_08289 Sequoiadendron giganteum HOM05D003614 ORTHO05D004156 4.1e-28 130.2 163 38.0
SEGI_12312 Sequoiadendron giganteum HOM05D003614 ORTHO05D004156 4.1e-28 130.2 163 38.0
Nitab4.5_0000573g0140 Nicotiana tabacum HOM05D003614 ORTHO05D004156 5.4e-28 129.8 656 22.7
CANSAT11G2476 Cannabis sativa HOM05D003614 ORTHO05D004156 7.1e-28 129.4 181 37.0
FAN03G2482 Fragaria x ananassa HOM05D003614 ORTHO05D004156 9.2e-28 129.0 670 21.3
Nn3g18642 Nelumbo nucifera HOM05D003614 ORTHO05D004156 1.2e-27 128.6 661 22.1
QL10p043434 Quercus lobata HOM05D003614 ORTHO05D004156 1.2e-27 128.6 182 36.3
Potri.005G063750 Populus trichocarpa HOM05D003614 ORTHO05D004156 2.1e-27 127.9 185 37.3
VMungo1215G0817 Vigna mungo HOM05D003614 ORTHO05D004156 2.1e-27 127.9 652 23.3
Sc03g0004310 Simmondsia chinensis HOM05D003614 ORTHO05D004156 3.5e-27 127.1 165 40.0
AUR62003572 Chenopodium quinoa HOM05D003614 ORTHO05D004156 6.0e-27 126.3 171 39.2
Lsat_1_v5_gn_6_112880 Lactuca sativa HOM05D003614 ORTHO05D004156 7.8e-27 125.9 652 22.9
COL.COLO4_35758 Corchorus olitorius HOM05D003614 ORTHO05D004156 1.0e-26 125.6 184 35.9
HPP92_024090 Vanilla planifolia HOM05D003614 ORTHO05D004156 1.0e-26 125.6 164 39.0
TAR628G1743 Trochodendron aralioides HOM05D003614 ORTHO05D004156 1.3e-26 125.2 167 37.1
Atru.chr4.881 Acer truncatum HOM05D003614 ORTHO05D004156 1.7e-26 124.8 178 34.8
Sabra05G0053000 Salix brachista HOM05D003614 ORTHO05D004156 1.7e-26 124.8 185 36.2
unitig_8.g4728 Utricularia gibba HOM05D003614 ORTHO05D004156 1.7e-26 124.8 163 38.0
Ca_00254_v3 Cicer arietinum L. HOM05D003614 ORTHO05D004156 2.3e-26 124.4 625 23.2
HanXRQChr17g0536801 Helianthus annuus HOM05D003614 ORTHO05D004156 2.3e-26 124.4 170 37.1
FAN06G2474 Fragaria x ananassa HOM05D003614 ORTHO05D004156 3.9e-26 123.6 669 20.8
Solyc09g010285.1 Solanum lycopersicum HOM05D003614 ORTHO05D004156 3.9e-26 123.6 170 37.1
CDE05G2135 Ceratophyllum demersum HOM05D003614 ORTHO05D004156 5.1e-26 123.2 164 35.4
Gohir.D09G211130 Gossypium hirsutum HOM05D003614 ORTHO05D004156 5.1e-26 123.2 170 36.5
SGA_v2.0_scaffold35G14037 Striga asiatica HOM05D003614 ORTHO05D004156 6.6e-26 122.9 166 37.3
FvH4_7g02870 Fragaria vesca HOM05D003614 ORTHO05D004156 8.6e-26 122.5 669 21.1
vmacro12792 Vaccinium macrocarpon HOM05D003614 ORTHO05D004156 1.1e-25 122.1 161 37.3
Dinv07113 Davidia involucrata HOM05D003614 ORTHO05D004156 1.9e-25 121.3 606 23.3
MD02G1287300 Malus domestica HOM05D003614 ORTHO05D004156 1.9e-25 121.3 170 37.6
ClCG04G005530 Citrullus lanatus HOM05D003614 ORTHO05D004156 2.5e-25 120.9 163 38.0
RcHm_v2.0_Chr1g0323821 Rosa chinensis HOM05D003614 ORTHO05D004156 2.5e-25 120.9 647 21.2
Rhsim10G0133600 Rhododendron simsii HOM05D003614 ORTHO05D004156 3.3e-25 120.6 173 35.8
Ah.02g121610 Amaranthus hybridus HOM05D003614 ORTHO05D004156 4.3e-25 120.2 171 39.2
AUR62017887 Chenopodium quinoa HOM05D003614 ORTHO05D004156 4.3e-25 120.2 171 38.6
CsaV3_4G012020 Cucumis sativus L. HOM05D003614 ORTHO05D004156 4.3e-25 120.2 163 38.0
Migut.L01806 Erythranthe guttata HOM05D003614 ORTHO05D004156 4.3e-25 120.2 184 33.2
Manes.09G100100 Manihot esculenta HOM05D003614 ORTHO05D004156 5.6e-25 119.8 192 32.8
Sopen09g004990 Solanum pennellii HOM05D003614 ORTHO05D004156 5.6e-25 119.8 170 36.5
Gohir.A09G213532 Gossypium hirsutum HOM05D003614 ORTHO05D004156 7.3e-25 119.4 175 37.7
Psat5g223160 Pisum sativum HOM05D003614 ORTHO05D004156 7.3e-25 119.4 649 23.0
TWI74G0358 Tripterygium wilfordii HOM05D003614 ORTHO05D004156 9.5e-25 119.0 175 35.4
DCAR_014331 Daucus carota HOM05D003614 ORTHO05D004156 1.6e-24 118.2 170 35.9
Glyma.17G135400 Glycine max HOM05D003614 ORTHO05D004156 1.6e-24 118.2 653 23.3
Os06g0634100 Oryza sativa ssp. japonica HOM05D003614 ORTHO05D004156 2.1e-24 117.9 155 36.1
QL03p003745 Quercus lobata HOM05D003614 ORTHO05D004156 2.1e-24 117.9 67 88.1
Aqoxy6G00302 Aquilegia oxysepala HOM05D003614 ORTHO05D004156 2.8e-24 117.5 167 37.7
MSTRG.10382 Avicennia marina HOM05D003614 ORTHO05D004156 2.8e-24 117.5 172 34.3
CSS0046512 Camellia sinensis var. sinensis HOM05D003614 ORTHO05D004156 3.6e-24 117.1 144 40.3
MELO3C008840.2 Cucumis melo HOM05D003614 ORTHO05D004156 3.6e-24 117.1 163 37.4
PGSC0003DMG400008935 Solanum tuberosum HOM05D003614 ORTHO05D004156 4.7e-24 116.7 161 37.3
arahy.Tifrunner.gnm1.ann1.8A3W3K Arachis hypogaea HOM05D003614 ORTHO05D004156 6.2e-24 116.3 172 37.2
Rhsim10G0133500 Rhododendron simsii HOM05D003614 ORTHO05D004156 6.2e-24 116.3 274 29.9
Zm00001eb387540 Zea mays HOM05D003614 ORTHO05D004156 6.2e-24 116.3 164 36.6
ECA233G5653 Erigeron canadensis HOM05D003614 ORTHO05D004156 8.1e-24 115.9 181 32.0
CAN.G397.92 Capsicum annuum HOM05D003614 ORTHO05D004156 1.4e-23 115.2 161 35.4
Lj3g0020898 Lotus japonicus HOM05D003614 ORTHO05D004156 1.8e-23 114.8 173 36.4
A07p40160 Brassica napus HOM05D003614 ORTHO05D004156 5.2e-23 113.2 163 36.2
BraA07t31560Z Brassica rapa HOM05D003614 ORTHO05D004156 5.2e-23 113.2 163 36.2
C06p48510 Brassica napus HOM05D003614 ORTHO05D004156 1.5e-22 111.7 163 35.6
PSO017G1060 Papaver somniferum HOM05D003614 ORTHO05D004156 3.4e-22 110.5 170 30.6
Sp5g29510 Schrenkiella parvula HOM05D003614 ORTHO05D004156 3.4e-22 110.5 179 34.1
BolC6t39880H Brassica oleracea HOM05D003614 ORTHO05D004156 5.8e-22 109.8 154 36.4
AT1G74350 Arabidopsis thaliana HOM05D003614 ORTHO05D004156 1.7e-21 108.2 154 36.4
PSO017G0346 Papaver somniferum HOM05D003614 ORTHO05D004156 1.7e-21 108.2 170 30.0
Aa31LG4G4600 Aethionema arabicum HOM05D003614 ORTHO05D004156 2.9e-21 107.5 154 35.1
SHI13956 Sapria himalayana HOM05D003614 ORTHO05D004156 6.4e-21 106.3 180 31.1
AL2G34200 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 1.1e-20 105.5 163 33.7
TPR.G5668 Trifolium pratense HOM05D003614 ORTHO05D004156 2.4e-20 104.4 142 38.0
QL07p005715 Quercus lobata HOM05D003614 ORTHO05D004156 3.2e-20 104.0 64 82.8
Actinidia06613 Actinidia chinensis HOM05D003614 ORTHO05D004156 9.2e-20 102.4 620 21.5
BcaC08g46865 Brassica carinata HOM05D003614 ORTHO05D004156 8.7e-18 95.9 154 35.1
Prupe.3G158600 Prunus persica HOM05D003614 ORTHO05D004156 1.3e-13 82.0 75 53.3
QL07p006739 Quercus lobata HOM05D000001 ORTHO05D010694 3.8e-13 80.5 62 66.1
TPR.G1400 Trifolium pratense HOM05D003614 ORTHO05D004156 3.3e-09 67.4 142 30.3
Pp3c15_3410 Physcomitrium patens HOM05D003614 ORTHO05D004156 6.9e-07 59.7 162 25.3
Cpa.g.sc42.164 Carica papaya HOM05D003614 ORTHO05D004156 7.6e-06 56.2 82 34.1
QL07p006514 Quercus lobata HOM05D003614 ORTHO05D004156 7.6e-06 56.2 147 31.3
SHI37854 Sapria himalayana HOM05D001560 ORTHO05D003613 7.6e-06 56.2 144 30.6
Pp3c2_27600 Physcomitrium patens HOM05D003614 ORTHO05D004156 9.9e-06 55.8 162 22.8


User provided reference genes

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