Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p091883 Quercus lobata HOM05D006642 ORTHO05D008856 2.1e-162 576.6 570 100.0
QL93p2017_0027 Quercus lobata HOM05D006642 ORTHO05D008856 7.4e-136 488.4 527 99.4
Cfa023538 Carpinus fangiana HOM05D006642 ORTHO05D008856 5.9e-101 372.5 569 78.4
MD09G1145700 Malus domestica HOM05D006642 ORTHO05D008856 6.1e-90 335.9 588 73.8
RcHm_v2.0_Chr2g0152561 Rosa chinensis HOM05D006642 ORTHO05D008856 1.2e-88 331.6 589 76.7
Prupe.3G180100 Prunus persica HOM05D006642 ORTHO05D008856 2.0e-88 330.9 585 74.7
Ciclev10014674m.g Citrus clementina HOM05D006642 ORTHO05D008856 3.7e-87 326.6 336 69.9
FAN05G5081 Fragaria x ananassa HOM05D006642 ORTHO05D008856 3.7e-87 326.6 337 77.2
FAN02G0564 Fragaria x ananassa HOM05D006642 ORTHO05D008856 1.8e-86 324.3 337 76.6
FAN14G1916 Fragaria x ananassa HOM05D006642 ORTHO05D008856 2.4e-86 323.9 337 76.9
CANSAT64G1219 Cannabis sativa HOM05D006642 ORTHO05D008856 4.1e-86 323.2 336 69.9
FvH4_6g38970 Fragaria vesca HOM05D006642 ORTHO05D008856 7.0e-86 322.4 337 76.6
ClCG11G016650 Citrullus lanatus HOM05D006642 ORTHO05D008856 9.2e-86 322.0 570 77.7
Atru.chr6.2750 Acer truncatum HOM05D006642 ORTHO05D008856 4.5e-85 319.7 336 69.0
PGR142G3441 Punica granatum HOM05D006642 ORTHO05D008856 7.8e-85 318.9 337 69.7
CsaV3_4G032160 Cucumis sativus L. HOM05D006642 ORTHO05D008856 1.7e-84 317.8 570 77.0
Sed0004539 Sechium edule HOM05D006642 ORTHO05D008856 5.0e-84 316.2 574 72.8
Eucgr.K01239 Eucalyptus grandis HOM05D006642 ORTHO05D008856 1.9e-83 314.3 336 68.8
CSS0001521 Camellia sinensis var. sinensis HOM05D006642 ORTHO05D008856 7.3e-83 312.4 337 68.8
CSS0049788 Camellia sinensis var. sinensis HOM05D006642 ORTHO05D008856 7.3e-83 312.4 337 68.8
TAR624G0481 Trochodendron aralioides HOM05D006642 ORTHO05D008856 1.4e-81 308.1 329 69.3
Dinv09723 Davidia involucrata HOM05D006642 ORTHO05D008856 2.3e-81 307.4 336 67.6
TWI23G0590 Tripterygium wilfordii HOM05D006642 ORTHO05D008856 8.9e-81 305.4 539 75.3
MSTRG.6613 Avicennia marina HOM05D006642 ORTHO05D008856 3.4e-80 303.5 339 67.6
Manes.09G006600 Manihot esculenta HOM05D006642 ORTHO05D008856 1.3e-79 301.6 576 71.9
Thecc.01G164600 Theobroma cacao HOM05D006642 ORTHO05D008856 1.3e-79 301.6 295 72.5
Actinidia39996 Actinidia chinensis HOM05D006642 ORTHO05D008856 3.7e-79 300.1 337 66.8
arahy.Tifrunner.gnm1.ann1.T7AVMG Arachis hypogaea HOM05D006642 ORTHO05D008856 4.9e-79 299.7 307 69.1
Sc14g0005210 Simmondsia chinensis HOM05D006642 ORTHO05D008856 1.4e-78 298.1 336 64.0
Gorai.012G039700 Gossypium raimondii HOM05D006642 ORTHO05D008856 1.8e-78 297.7 295 72.5
Glyma.10G285200 Glycine max HOM05D006642 ORTHO05D008856 2.4e-78 297.4 310 67.4
Glyma.20G103800 Glycine max HOM05D006642 ORTHO05D008856 2.4e-78 297.4 309 68.3
Phvul.007G015300 Phaseolus vulgaris HOM05D006642 ORTHO05D008856 3.2e-78 297.0 310 68.4
vmacro19989 Vaccinium macrocarpon HOM05D006642 ORTHO05D008856 3.2e-78 297.0 337 67.4
Gohir.A05G380400 Gossypium hirsutum HOM05D006642 ORTHO05D008856 7.0e-78 295.8 295 72.2
Duzib147G0394 Durio zibethinus HOM05D006642 ORTHO05D008856 1.6e-77 294.7 516 72.9
Sp5g03940 Schrenkiella parvula HOM05D006642 ORTHO05D008856 1.6e-77 294.7 338 67.2
THA.LOC104802288 Tarenaya hassleriana HOM05D006642 ORTHO05D008856 2.0e-77 294.3 346 67.3
BcaC07g40235 Brassica carinata HOM05D006642 ORTHO05D008856 2.7e-77 293.9 338 73.7
Gohir.D04G035200 Gossypium hirsutum HOM05D006642 ORTHO05D008856 2.7e-77 293.9 295 71.9
C08p34230 Brassica napus HOM05D006642 ORTHO05D008856 3.5e-77 293.5 338 73.4
COL.COLO4_29911 Corchorus olitorius HOM05D006642 ORTHO05D008856 7.8e-77 292.4 295 71.2
Nn4g26621 Nelumbo nucifera HOM05D006642 ORTHO05D008856 7.8e-77 292.4 307 68.7
Hma1.2p1_0073F.1_g038540 Hydrangea macrophylla HOM05D006642 ORTHO05D008856 1.0e-76 292.0 309 69.6
Carub.0005s2580 Capsella rubella HOM05D006642 ORTHO05D008856 1.3e-76 291.6 338 66.6
Thhalv10005856m.g Eutrema salsugineum HOM05D006642 ORTHO05D008856 1.3e-76 291.6 338 66.9
GSVIVG01020809001 Vitis vinifera HOM05D006642 ORTHO05D008856 1.3e-76 291.6 293 73.7
PSO675G5462 Papaver somniferum HOM05D006642 ORTHO05D008856 3.9e-76 290.0 306 75.2
Potri.001G220300 Populus trichocarpa HOM05D006642 ORTHO05D008856 3.9e-76 290.0 336 65.8
A09p51470 Brassica napus HOM05D006642 ORTHO05D008856 8.6e-76 288.9 337 72.1
PSO541G5267 Papaver somniferum HOM05D006642 ORTHO05D008856 1.1e-75 288.5 305 76.1
CARHR169450 Cardamine hirsuta HOM05D006642 ORTHO05D008856 1.9e-75 287.7 338 66.0
Ah.07g201920 Amaranthus hybridus HOM05D006642 ORTHO05D008856 3.3e-75 287.0 315 66.7
AT3G59040 Arabidopsis thaliana HOM05D006642 ORTHO05D008856 3.3e-75 287.0 338 66.3
VMungo0720G2195 Vigna mungo HOM05D000164 ORTHO05D000096 3.3e-75 287.0 309 66.3
Ca_11227_v3 Cicer arietinum L. HOM05D006642 ORTHO05D008856 4.3e-75 286.6 332 66.0
Cc05_g00360 Coffea canephora HOM05D006642 ORTHO05D008856 4.3e-75 286.6 335 65.7
Lalb_Chr06g0163881 Lupinus albus HOM05D006642 ORTHO05D008856 9.5e-75 285.4 313 66.8
Oeu051395.1 Olea europaea HOM05D006642 ORTHO05D008856 9.5e-75 285.4 306 69.0
BraA09t40583Z Brassica rapa HOM05D006642 ORTHO05D008856 1.6e-74 284.6 337 72.7
DCAR_023000 Daucus carota HOM05D006642 ORTHO05D008856 1.6e-74 284.6 306 67.3
SGA_v2.0_scaffold73G24452 Striga asiatica HOM05D006642 ORTHO05D008856 1.6e-74 284.6 336 63.1
Solyc07g043600.4 Solanum lycopersicum HOM05D006642 ORTHO05D008856 2.8e-74 283.9 338 64.5
Sopen07g023170 Solanum pennellii HOM05D006642 ORTHO05D008856 2.8e-74 283.9 338 64.5
BolC8t51020H Brassica oleracea HOM05D006642 ORTHO05D008856 4.7e-74 283.1 334 72.2
Nitab4.5_0007665g0020 Nicotiana tabacum HOM05D006642 ORTHO05D008856 1.4e-73 281.6 306 67.6
AUR62002293 Chenopodium quinoa HOM05D006642 ORTHO05D008856 1.8e-73 281.2 317 65.9
MBI02_g40097_MAGBIO Magnolia biondii HOM05D006642 ORTHO05D008856 1.8e-73 281.2 294 69.7
Aa31LG10G13530 Aethionema arabicum HOM05D006642 ORTHO05D008856 2.3e-73 280.8 337 64.4
Aqoxy5G04293 Aquilegia oxysepala HOM05D006642 ORTHO05D008856 2.3e-73 280.8 296 69.6
Sabra16G0124100 Salix brachista HOM05D006642 ORTHO05D008856 2.3e-73 280.8 306 68.0
CAN.G819.5 Capsicum annuum HOM05D006642 ORTHO05D008856 4.0e-73 280.0 339 64.6
PGSC0003DMG400015924 Solanum tuberosum HOM05D006642 ORTHO05D008856 4.0e-73 280.0 332 64.5
Ah.07g198470 Amaranthus hybridus HOM05D006642 ORTHO05D008856 5.2e-73 279.6 314 49.4
Nitab4.5_0001843g0110 Nicotiana tabacum HOM05D006642 ORTHO05D008856 5.2e-73 279.6 306 67.0
Medtr1g114300 Medicago truncatula HOM05D006642 ORTHO05D008856 1.5e-72 278.1 308 66.6
HanXRQChr01g0029361 Helianthus annuus HOM05D006642 ORTHO05D008856 2.0e-72 277.7 295 68.1
Rhsim05G0172300 Rhododendron simsii HOM05D006642 ORTHO05D008856 3.4e-72 276.9 306 74.2
Lj5g0013784 Lotus japonicus HOM05D006642 ORTHO05D008856 4.4e-72 276.6 307 65.8
Hund08483 Selenicereus undatus HOM05D006642 ORTHO05D008856 7.5e-72 275.8 336 63.1
Psat6g233520 Pisum sativum HOM05D006642 ORTHO05D008856 1.3e-71 275.0 308 66.2
HPP92_011054 Vanilla planifolia HOM05D006642 ORTHO05D008856 2.9e-71 273.9 304 66.1
BcaC07g40308 Brassica carinata HOM05D006642 ORTHO05D008856 3.7e-71 273.5 293 77.8
AUR62015397 Chenopodium quinoa HOM05D006642 ORTHO05D008856 6.4e-71 272.7 353 46.7
ECA248G0755 Erigeron canadensis HOM05D006642 ORTHO05D008856 8.3e-71 272.3 295 67.5
EL10Ac8g19571 Beta vulgaris HOM05D006642 ORTHO05D008856 3.2e-70 270.4 338 62.4
Lsat_1_v5_gn_1_49160 Lactuca sativa HOM05D006642 ORTHO05D008856 4.1e-70 270.0 305 60.0
CDE05G1065 Ceratophyllum demersum HOM05D006642 ORTHO05D008856 5.4e-70 269.6 296 68.6
Os08g0191900 Oryza sativa ssp. japonica HOM05D006642 ORTHO05D008856 1.2e-69 268.5 306 66.7
Migut.M00108 Erythranthe guttata HOM05D006642 ORTHO05D008856 2.7e-69 267.3 339 48.1
unitig_899.g15288 Utricularia gibba HOM05D006642 ORTHO05D008856 2.7e-69 267.3 343 61.5
ATR1098G151 Amborella trichopoda HOM05D006642 ORTHO05D008856 3.5e-69 266.9 296 65.9
Zm00001eb413390 Zea mays HOM05D006642 ORTHO05D008856 1.1e-67 261.9 324 61.7
TPR.G4069 Trifolium pratense HOM05D006642 ORTHO05D008856 2.5e-67 260.8 326 60.7
MELO3C026387.2 Cucumis melo HOM05D006642 ORTHO05D008856 2.6e-64 250.8 516 78.3
MD17G1132200 Malus domestica HOM05D006642 ORTHO05D008856 1.3e-60 238.4 292 62.0
Cpa.g.sc50.124 Carica papaya HOM05D006642 ORTHO05D008856 2.3e-60 237.7 306 54.9
Haze_13626 Corylus avellana HOM05D006642 ORTHO05D008856 1.1e-57 228.8 446 80.9
Lj1A585G41 Lonicera japonica HOM05D006642 ORTHO05D008856 1.0e-52 212.2 183 62.8
Nn4g26620 Nelumbo nucifera HOM05D006642 ORTHO05D008856 8.4e-47 192.6 134 68.7
EL10Ac5g11659 Beta vulgaris HOM05D006642 ORTHO05D008856 8.7e-44 182.6 166 56.6
HPP92_011074 Vanilla planifolia HOM05D006642 ORTHO05D008856 9.6e-43 179.1 147 60.5
AL5G40920 Arabidopsis lyrata HOM05D006642 ORTHO05D008856 1.1e-33 149.1 196 70.4
CiPaw.03G197600 Carya illinoinensis HOM05D006642 ORTHO05D008856 9.9e-32 142.5 309 84.1
FAN09G4833 Fragaria x ananassa HOM05D006642 ORTHO05D008856 2.1e-29 134.8 125 62.4
EL10Ac5g11660 Beta vulgaris HOM05D006642 ORTHO05D008856 4.8e-26 123.6 99 64.6
Pp3c26_11100 Physcomitrium patens HOM05D006642 ORTHO05D008856 1.0e-23 115.9 262 45.0
BcaC08g44955 Brassica carinata HOM05D006642 ORTHO05D008856 9.3e-22 109.4 82 64.6
Mapoly0047s0104 Marchantia polymorpha HOM05D006642 ORTHO05D008856 2.1e-21 108.2 261 45.2
SMO259G0047 Selaginella moellendorffii HOM05D006642 ORTHO05D008856 1.0e-20 105.9 299 40.1
BcaB02g07487 Brassica carinata HOM05D000461 ORTHO05D001840 4.3e-19 100.5 78 64.1
C06p25860 Brassica napus HOM05D000461 ORTHO05D001840 7.4e-19 99.8 289 32.2
BcaB02g07488 Brassica carinata HOM05D006642 ORTHO05D008856 7.6e-16 89.7 59 79.7
BolC6t37747H Brassica oleracea HOM05D006642 ORTHO05D032904 3.2e-14 84.3 57 75.4
BcaC08g44954 Brassica carinata HOM05D006642 ORTHO05D032904 2.6e-08 64.7 45 75.6


User provided reference genes

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