Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p061251 Quercus lobata HOM05D005173 ORTHO05D006214 3.6e-180 634.8 320 100.0
CiPaw.03G210500 Carya illinoinensis HOM05D005173 ORTHO05D006214 2.5e-165 585.5 305 91.5
ClCG03G015280 Citrullus lanatus HOM05D005173 ORTHO05D006214 8.0e-164 580.5 320 88.8
MELO3C015504.2 Cucumis melo HOM05D005173 ORTHO05D006214 2.0e-162 575.9 306 91.8
CsaV3_1G040770 Cucumis sativus L. HOM05D005173 ORTHO05D006214 9.8e-162 573.5 303 92.1
Manes.03G037700 Manihot esculenta HOM05D005173 ORTHO05D006214 2.0e-159 565.8 306 88.6
Sed0012764 Sechium edule HOM05D005173 ORTHO05D006214 2.7e-159 565.5 306 89.9
Atru.chr7.1658 Acer truncatum HOM05D005173 ORTHO05D006214 1.3e-158 563.1 306 89.9
Thecc.09G081500 Theobroma cacao HOM05D005173 ORTHO05D006214 1.7e-158 562.8 306 88.9
PGR142G0948 Punica granatum HOM05D005173 ORTHO05D006214 6.6e-158 560.8 303 89.8
Glyma.13G107800 Glycine max HOM05D005173 ORTHO05D006214 1.9e-157 559.3 306 88.6
Glyma.17G051500 Glycine max HOM05D005173 ORTHO05D006214 1.9e-157 559.3 306 88.6
Lalb_Chr07g0181031 Lupinus albus HOM05D005173 ORTHO05D006214 5.6e-157 557.8 306 87.6
Phvul.003G133200 Phaseolus vulgaris HOM05D005173 ORTHO05D006214 5.6e-157 557.8 304 88.2
Potri.006G145200 Populus trichocarpa HOM05D005173 ORTHO05D006214 5.6e-157 557.8 306 87.9
Potri.018G064800 Populus trichocarpa HOM05D005173 ORTHO05D006214 2.1e-156 555.8 306 87.6
CSS0048515 Camellia sinensis var. sinensis HOM05D005173 ORTHO05D006214 6.2e-156 554.3 317 84.5
Cpa.g.sc28.94 Carica papaya HOM05D005173 ORTHO05D006214 1.0e-155 553.5 306 86.3
Lj4g0027115 Lotus japonicus HOM05D005173 ORTHO05D006214 1.4e-155 553.1 317 83.6
Sed0013811 Sechium edule HOM05D005173 ORTHO05D006214 1.4e-155 553.1 306 87.9
Prupe.7G203600 Prunus persica HOM05D005173 ORTHO05D006214 1.8e-155 552.7 306 85.9
TAR636G1303 Trochodendron aralioides HOM05D005173 ORTHO05D006214 1.8e-155 552.7 306 86.3
Dinv42364 Davidia involucrata HOM05D005173 ORTHO05D006214 2.3e-155 552.4 306 87.6
VMungo1215G2902 Vigna mungo HOM05D005173 ORTHO05D006214 3.1e-155 552.0 306 86.6
Ciclev10008959m.g Citrus clementina HOM05D005173 ORTHO05D006214 4.0e-155 551.6 304 87.8
Manes.16G098000 Manihot esculenta HOM05D005173 ORTHO05D006214 4.0e-155 551.6 308 86.4
Lalb_Chr12g0200011 Lupinus albus HOM05D005173 ORTHO05D006214 5.2e-155 551.2 302 86.8
Actinidia39689 Actinidia chinensis HOM05D005173 ORTHO05D006214 6.8e-155 550.8 316 84.5
arahy.Tifrunner.gnm1.ann1.6AS4TW Arachis hypogaea HOM05D005173 ORTHO05D006214 6.8e-155 550.8 318 84.3
Haze_25966 Corylus avellana HOM05D005173 ORTHO05D006214 6.8e-155 550.8 368 74.2
Duzib150G1290 Durio zibethinus HOM05D005173 ORTHO05D006214 1.5e-154 549.7 306 86.6
TWI32G0591 Tripterygium wilfordii HOM05D005173 ORTHO05D006214 1.5e-154 549.7 300 86.3
Eucgr.C00843 Eucalyptus grandis HOM05D005173 ORTHO05D006214 3.4e-154 548.5 303 86.1
Gorai.013G226300 Gossypium raimondii HOM05D005173 ORTHO05D006214 3.4e-154 548.5 300 87.3
Hma1.2p1_0797F.1_g219350 Hydrangea macrophylla HOM05D005173 ORTHO05D006214 3.4e-154 548.5 306 87.9
Nn8g38732 Nelumbo nucifera HOM05D005173 ORTHO05D006214 3.4e-154 548.5 306 85.9
Dinv25585 Davidia involucrata HOM05D005173 ORTHO05D006214 5.8e-154 547.7 306 86.3
Sopen07g020470 Solanum pennellii HOM05D005173 ORTHO05D006214 5.8e-154 547.7 306 85.9
MD15G1213300 Malus domestica HOM05D005173 ORTHO05D006214 7.5e-154 547.4 306 84.0
arahy.Tifrunner.gnm1.ann1.9Y0BJI Arachis hypogaea HOM05D005173 ORTHO05D006214 9.8e-154 547.0 318 83.6
Solyc07g041200.3 Solanum lycopersicum HOM05D005173 ORTHO05D006214 1.3e-153 546.6 306 85.6
PGSC0003DMG400020952 Solanum tuberosum HOM05D005173 ORTHO05D006214 1.3e-153 546.6 306 85.6
GSVIVG01015121001 Vitis vinifera HOM05D005173 ORTHO05D006214 1.7e-153 546.2 303 87.5
TWI63G0548 Tripterygium wilfordii HOM05D005173 ORTHO05D006214 6.4e-153 544.3 306 84.3
CAN.G88.5 Capsicum annuum HOM05D005173 ORTHO05D006214 1.4e-152 543.1 306 85.3
Ca_21308_v3 Cicer arietinum L. HOM05D005173 ORTHO05D006214 2.4e-152 542.3 306 85.6
Migut.L01541 Erythranthe guttata HOM05D005173 ORTHO05D006214 2.4e-152 542.3 306 84.6
FAN19G2713 Fragaria x ananassa HOM05D005173 ORTHO05D006214 2.4e-152 542.3 317 81.1
MD02G1086100 Malus domestica HOM05D005173 ORTHO05D006214 2.4e-152 542.3 306 83.0
TAR624G0255 Trochodendron aralioides HOM05D005173 ORTHO05D006214 2.4e-152 542.3 306 84.6
EL10Ac8g19142 Beta vulgaris HOM05D005173 ORTHO05D006214 3.2e-152 542.0 301 85.7
FAN23G0270 Fragaria x ananassa HOM05D005173 ORTHO05D006214 3.2e-152 542.0 317 81.1
Gohir.A13G192200 Gossypium hirsutum HOM05D005173 ORTHO05D006214 3.2e-152 542.0 300 85.7
RcHm_v2.0_Chr2g0094221 Rosa chinensis HOM05D005173 ORTHO05D006214 3.2e-152 542.0 306 83.0
FvH4_1g08150 Fragaria vesca HOM05D005173 ORTHO05D006214 4.1e-152 541.6 306 83.3
FAN26G1854 Fragaria x ananassa HOM05D005173 ORTHO05D006214 2.0e-151 539.3 306 83.0
FAN28G2824 Fragaria x ananassa HOM05D005173 ORTHO05D006214 2.0e-151 539.3 317 80.8
CANSAT56G2861 Cannabis sativa HOM05D005173 ORTHO05D006214 3.5e-151 538.5 304 83.6
Aqoxy7G01101 Aquilegia oxysepala HOM05D005173 ORTHO05D006214 1.0e-150 537.0 303 83.5
FAN26G2726 Fragaria x ananassa HOM05D005173 ORTHO05D006214 1.7e-150 536.2 306 82.7
Sc18g0002360 Simmondsia chinensis HOM05D005173 ORTHO05D006214 1.7e-150 536.2 306 82.4
COL.COLO4_18139 Corchorus olitorius HOM05D005173 ORTHO05D006214 5.0e-150 534.6 335 78.5
Gohir.D13G197600 Gossypium hirsutum HOM05D005173 ORTHO05D006214 5.0e-150 534.6 299 86.0
HanXRQChr01g0007561 Helianthus annuus HOM05D005173 ORTHO05D006214 8.6e-150 533.9 301 85.7
MSTRG.26457 Avicennia marina HOM05D005173 ORTHO05D006214 1.1e-149 533.5 303 84.2
Medtr4g125660 Medicago truncatula HOM05D005173 ORTHO05D006214 1.5e-149 533.1 301 85.7
MSTRG.19482 Avicennia marina HOM05D005173 ORTHO05D006214 3.3e-149 531.9 306 83.0
PSO063G3756 Papaver somniferum HOM05D005173 ORTHO05D006214 7.3e-149 530.8 304 82.9
PSO421G0551 Papaver somniferum HOM05D005173 ORTHO05D006214 1.6e-148 529.6 304 82.9
BcaB08g36505 Brassica carinata HOM05D005173 ORTHO05D006214 2.1e-148 529.3 303 83.2
HanXRQChr09g0237971 Helianthus annuus HOM05D005173 ORTHO05D006214 8.1e-148 527.3 312 81.4
Psat4g016960 Pisum sativum HOM05D005173 ORTHO05D006214 8.1e-148 527.3 306 83.3
THA.LOC104799624 Tarenaya hassleriana HOM05D005173 ORTHO05D006214 1.8e-147 526.2 306 83.3
Cc00_g19370 Coffea canephora HOM05D005173 ORTHO05D006214 2.3e-147 525.8 302 84.1
Thhalv10014184m.g Eutrema salsugineum HOM05D005173 ORTHO05D006214 1.2e-146 523.5 303 81.8
A10p19490 Brassica napus HOM05D005173 ORTHO05D006214 2.6e-146 522.3 303 81.8
BraA10t44025Z Brassica rapa HOM05D005173 ORTHO05D006214 2.6e-146 522.3 303 81.8
Sp6g23940 Schrenkiella parvula HOM05D005173 ORTHO05D006214 7.5e-146 520.8 303 81.2
A02p06290 Brassica napus HOM05D005173 ORTHO05D006214 9.8e-146 520.4 302 81.8
BraA02t05577Z Brassica rapa HOM05D005173 ORTHO05D006214 9.8e-146 520.4 302 81.8
Carub.0006s1885 Capsella rubella HOM05D005173 ORTHO05D006214 9.8e-146 520.4 301 82.4
Sabra18G0057400 Salix brachista HOM05D005173 ORTHO05D006214 1.3e-145 520.0 374 71.4
MSTRG.10526 Avicennia marina HOM05D005173 ORTHO05D006214 1.1e-144 516.9 306 80.7
BcaC04g19437 Brassica carinata HOM05D005173 ORTHO05D006214 1.1e-144 516.9 303 80.9
C09p55690 Brassica napus HOM05D005173 ORTHO05D006214 1.1e-144 516.9 303 80.9
Lsat_1_v5_gn_5_142000 Lactuca sativa HOM05D005173 ORTHO05D006214 1.4e-144 516.5 298 82.2
BolC2t07046H Brassica oleracea HOM05D005173 ORTHO05D006214 1.9e-144 516.2 302 81.1
Oeu054818.3 Olea europaea HOM05D005173 ORTHO05D006214 1.9e-144 516.2 350 74.6
AL6G32050 Arabidopsis lyrata HOM05D005173 ORTHO05D006214 2.4e-144 515.8 304 80.9
AT5G20520 Arabidopsis thaliana HOM05D005173 ORTHO05D006214 5.4e-144 514.6 303 81.2
BolC9t58435H Brassica oleracea HOM05D005173 ORTHO05D006214 1.2e-143 513.5 303 80.5
Duzib168G0179 Durio zibethinus HOM05D005173 ORTHO05D006214 1.6e-143 513.1 306 81.0
Lj7C682G9 Lonicera japonica HOM05D005173 ORTHO05D006214 4.6e-143 511.5 303 82.5
Sabra06G0114800 Salix brachista HOM05D005173 ORTHO05D006214 4.6e-143 511.5 314 79.3
SGA_v2.0_scaffold21G09462 Striga asiatica HOM05D005173 ORTHO05D006214 4.6e-143 511.5 361 72.6
ECA234G3859 Erigeron canadensis HOM05D005173 ORTHO05D006214 6.0e-143 511.1 306 79.4
Lsat_1_v5_gn_7_34821 Lactuca sativa HOM05D005173 ORTHO05D006214 6.0e-143 511.1 302 82.1
CARHR192290 Cardamine hirsuta HOM05D005173 ORTHO05D006214 7.8e-143 510.8 306 79.4
Nitab4.5_0001488g0160 Nicotiana tabacum HOM05D005173 ORTHO05D006214 3.9e-142 508.4 306 81.7
DCAR_024724 Daucus carota HOM05D005173 ORTHO05D006214 5.1e-142 508.1 303 80.2
BcaB05g22843 Brassica carinata HOM05D005173 ORTHO05D006214 1.1e-141 506.9 302 80.5
CDE04G2820 Ceratophyllum demersum HOM05D005173 ORTHO05D006214 1.1e-141 506.9 304 79.3
Nitab4.5_0013150g0020 Nicotiana tabacum HOM05D005173 ORTHO05D006214 4.3e-141 505.0 306 81.4
Ah.14g085040 Amaranthus hybridus HOM05D005173 ORTHO05D006214 1.4e-139 500.0 306 79.1
AUR62029004 Chenopodium quinoa HOM05D005173 ORTHO05D006214 2.6e-138 495.7 306 78.8
vmacro17173 Vaccinium macrocarpon HOM05D005173 ORTHO05D006214 4.4e-138 495.0 408 63.7
Peaxi162Scf00246g00045 Petunia axillaris HOM05D005173 ORTHO05D006214 1.1e-136 490.3 290 82.8
AUR62025172 Chenopodium quinoa HOM05D005173 ORTHO05D006214 4.1e-136 488.4 306 77.8
Zm00001eb108940 Zea mays HOM05D005173 ORTHO05D006214 4.6e-135 485.0 299 76.3
SalBow1G6961 Salvia bowleyana HOM05D005173 ORTHO05D006214 1.7e-134 483.0 339 72.6
Os07g0608300 Oryza sativa ssp. japonica HOM05D005173 ORTHO05D006214 1.9e-133 479.6 300 74.7
unitig_22.g5750 Utricularia gibba HOM05D005173 ORTHO05D006214 9.6e-133 477.2 308 74.0
HPP92_006149 Vanilla planifolia HOM05D005173 ORTHO05D006214 2.0e-130 469.5 299 74.6
DCAR_028284 Daucus carota HOM05D005173 ORTHO05D006214 1.3e-129 466.8 319 71.2
Aa31LG1G14140 Aethionema arabicum HOM05D005173 ORTHO05D006214 2.2e-129 466.1 304 74.3
SHI33752 Sapria himalayana HOM05D005173 ORTHO05D006214 1.6e-127 459.9 283 78.4
Rhsim05G0012900 Rhododendron simsii HOM05D005173 ORTHO05D006214 5.1e-126 454.9 334 69.2
Mapoly0002s0260 Marchantia polymorpha HOM05D005173 ORTHO05D006214 4.2e-120 435.3 297 70.4
SMO203G0271 Selaginella moellendorffii HOM05D005173 ORTHO05D006214 1.5e-117 426.8 299 68.9
QL02p061362 Quercus lobata HOM05D005173 ORTHO05D006214 8.4e-113 411.0 208 100.0
DCAR_031940 Daucus carota HOM05D005173 ORTHO05D006214 4.2e-112 408.7 302 66.9
BcaB05g22835 Brassica carinata HOM05D005173 ORTHO05D006214 4.8e-108 395.2 224 82.6
BcaC03g13770 Brassica carinata HOM05D005173 ORTHO05D006214 2.4e-107 392.9 283 70.0
ATR0598G148 Amborella trichopoda HOM05D005173 ORTHO05D006214 1.2e-106 390.6 232 79.3
Pp3c15_14310 Physcomitrium patens HOM05D005173 ORTHO05D006214 5.7e-101 371.7 293 62.1
Actinidia25222 Actinidia chinensis HOM05D005173 ORTHO05D006214 1.5e-98 363.6 216 81.5
CBR_g3819 Chara braunii HOM05D005173 ORTHO05D006214 1.7e-97 360.1 296 62.2
TPR.G9429 Trifolium pratense HOM05D005173 ORTHO05D006214 5.9e-82 308.5 179 82.1
Rhsim03G0230600 Rhododendron simsii HOM05D005173 ORTHO05D006214 3.9e-78 295.8 220 67.3
HPP92_009230 Vanilla planifolia HOM05D005173 ORTHO05D006214 7.7e-74 281.6 175 77.1
HPP92_009231 Vanilla planifolia HOM05D005173 ORTHO05D006214 5.9e-58 228.8 129 79.1
TPR.G23232 Trifolium pratense HOM05D005173 ORTHO05D006214 3.2e-56 223.0 131 80.9
Cre03.g160100 Chlamydomonas reinhardtii HOM05D005173 ORTHO05D006214 1.6e-55 220.7 301 38.9
BNapus_Darmor_BZH_scaffold_38p01550 Brassica napus HOM05D005173 ORTHO05D006214 1.1e-51 208.0 130 77.7
Cfa026742 Carpinus fangiana HOM05D005173 ORTHO05D006214 3.4e-37 159.8 307 35.2
SGA_v2.0_scaffold23G10070 Striga asiatica HOM05D005173 ORTHO05D006214 1.8e-30 137.5 118 60.2
PRCOL_00002900 Prasinoderma coloniale HOM05D005173 ORTHO05D006214 2.6e-29 133.7 303 31.4
ClCG07G005020 Citrullus lanatus HOM05D005173 ORTHO05D006214 3.6e-23 113.2 77 76.6
Hma1.2p1_0440F.1_g153610 Hydrangea macrophylla HOM05D005173 ORTHO05D006214 2.2e-20 104.0 78 64.1
Lsat_1_v5_gn_2_31840 Lactuca sativa HOM05D005173 ORTHO05D006214 8.7e-17 92.0 57 75.4
CSS0040146 Camellia sinensis var. sinensis HOM05D005173 ORTHO05D006214 9.6e-16 88.6 54 72.2
Lsat_1_v5_gn_5_98841 Lactuca sativa HOM05D005173 ORTHO05D006214 3.6e-15 86.7 80 56.2
Haze_27227 Corylus avellana HOM05D000464 ORTHO05D000408 1.7e-12 77.8 203 27.6
MCO15G111 Micromonas commoda HOM05D005173 ORTHO05D006214 2.4e-11 73.9 293 24.2
Nn2g12540 Nelumbo nucifera HOM05D005173 ORTHO05D006214 9.3e-11 72.0 39 74.4
SpUn0238_0020 Schrenkiella parvula HOM05D000464 ORTHO05D000408 1.2e-10 71.6 225 24.0
Ca_04375_v3 Cicer arietinum L. HOM05D000464 ORTHO05D000408 2.7e-10 70.5 267 23.6
Lalb_Chr02g0158151 Lupinus albus HOM05D000464 ORTHO05D000408 6.0e-10 69.3 207 24.2
THA.LOC104823854 Tarenaya hassleriana HOM05D000464 ORTHO05D000408 6.0e-10 69.3 241 24.1
Psat1g081920 Pisum sativum HOM05D000464 ORTHO05D000408 7.8e-10 68.9 215 25.6
Sc11g0008440 Simmondsia chinensis HOM05D000464 ORTHO05D000408 1.0e-09 68.6 205 23.9
Thhalv10009744m.g Eutrema salsugineum HOM05D000464 ORTHO05D000408 1.3e-09 68.2 222 24.8
Phvul.004G067200 Phaseolus vulgaris HOM05D000464 ORTHO05D000408 1.7e-09 67.8 205 24.4
Glyma.19G050600 Glycine max HOM05D000464 ORTHO05D000408 3.0e-09 67.0 215 25.6
Hma1.2p1_0536F.1_g174110 Hydrangea macrophylla HOM05D005096 ORTHO05D006214 3.0e-09 67.0 44 70.5
Medtr6g018930 Medicago truncatula HOM05D000464 ORTHO05D000408 3.0e-09 67.0 209 24.9
Lj2g0002905 Lotus japonicus HOM05D000464 ORTHO05D000408 3.9e-09 66.6 212 25.5
BcaB02g06457 Brassica carinata HOM05D000464 ORTHO05D000408 5.1e-09 66.2 222 26.6
Glyma.13G044600 Glycine max HOM05D000464 ORTHO05D000408 5.1e-09 66.2 211 24.6
Carub.0001s1333 Capsella rubella HOM05D000464 ORTHO05D000408 6.6e-09 65.9 203 27.1
BcaC05g25265 Brassica carinata HOM05D000464 ORTHO05D000408 1.1e-08 65.1 225 23.1
Hund13036 Selenicereus undatus HOM05D000464 ORTHO05D000408 1.1e-08 65.1 205 24.9
AL1G25394 Arabidopsis lyrata HOM05D000464 ORTHO05D000408 1.5e-08 64.7 173 28.9
BolC5t29894H Brassica oleracea HOM05D000464 ORTHO05D000408 1.5e-08 64.7 225 23.1
DCAR_004270 Daucus carota HOM05D000464 ORTHO05D000408 1.5e-08 64.7 210 24.3
A06p09700 Brassica napus HOM05D000464 ORTHO05D000408 1.9e-08 64.3 225 23.1
C05p11410 Brassica napus HOM05D000464 ORTHO05D000408 1.9e-08 64.3 225 23.1
BraA06t24160Z Brassica rapa HOM05D000464 ORTHO05D000408 1.9e-08 64.3 225 23.1
AT1G13610 Arabidopsis thaliana HOM05D000464 ORTHO05D000408 2.5e-08 63.9 173 28.3
EL10Ac6g14651 Beta vulgaris HOM05D000464 ORTHO05D000408 2.5e-08 63.9 207 22.7
Pp3c11_18640 Physcomitrium patens HOM05D000464 ORTHO05D000408 2.5e-08 63.9 223 24.2
HPP92_006403 Vanilla planifolia HOM05D000464 ORTHO05D000408 3.3e-08 63.5 205 23.9
Ciclev10011937m.g Citrus clementina HOM05D000464 ORTHO05D000408 4.3e-08 63.2 234 22.2
DCAR_008219 Daucus carota HOM05D000464 ORTHO05D000408 5.6e-08 62.8 245 22.9
SalBow5G5150 Salvia bowleyana HOM05D000464 ORTHO05D000408 1.3e-07 61.6 175 25.1
SEGI_17932 Sequoiadendron giganteum HOM05D005173 ORTHO05D006214 1.3e-07 61.6 38 76.3
unitig_748.g7185 Utricularia gibba HOM05D000464 ORTHO05D000408 1.3e-07 61.6 203 22.7
ATR0691G084 Amborella trichopoda HOM05D000464 ORTHO05D000408 3.6e-07 60.1 205 22.9
EL10Ac8g18845 Beta vulgaris HOM05D000464 ORTHO05D000408 3.6e-07 60.1 206 24.3
Hund25148 Selenicereus undatus HOM05D000464 ORTHO05D000408 8.1e-07 58.9 207 22.7
MSTRG.9934 Avicennia marina HOM05D003117 ORTHO05D003612 1.4e-06 58.2 187 28.9
AL7G42000 Arabidopsis lyrata HOM05D002163 ORTHO05D002386 1.8e-06 57.8 186 25.3
AT4G14290 Arabidopsis thaliana HOM05D002163 ORTHO05D002386 1.8e-06 57.8 186 25.3
MBI11_g15904_MAGBIO Magnolia biondii HOM05D003117 ORTHO05D003612 1.8e-06 57.8 275 25.1
COL.COLO4_15763 Corchorus olitorius HOM05D003117 ORTHO05D003612 6.9e-06 55.8 153 30.1


User provided reference genes

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