Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p060797 Quercus lobata HOM05D003066 ORTHO05D004162 4.4e-48 194.1 88 100.0
CSS0003286 Camellia sinensis var. sinensis HOM05D003066 ORTHO05D004162 1.1e-41 172.9 82 95.1
CSS0010005 Camellia sinensis var. sinensis HOM05D003066 ORTHO05D004162 1.1e-41 172.9 82 95.1
CDE06G2405 Ceratophyllum demersum HOM05D003066 ORTHO05D004162 1.1e-41 172.9 82 95.1
Actinidia14715 Actinidia chinensis HOM05D003066 ORTHO05D004162 1.4e-41 172.6 82 95.1
Aqoxy7G01226 Aquilegia oxysepala HOM05D003066 ORTHO05D004162 1.4e-41 172.6 82 95.1
Cfa017953 Carpinus fangiana HOM05D003066 ORTHO05D004162 1.4e-41 172.6 82 95.1
Haze_18191 Corylus avellana HOM05D003066 ORTHO05D004162 1.4e-41 172.6 82 95.1
Glyma.17G228800 Glycine max HOM05D003066 ORTHO05D004162 1.4e-41 172.6 82 93.9
Lalb_Chr23g0267761 Lupinus albus HOM05D003066 ORTHO05D004162 1.4e-41 172.6 82 93.9
MD08G1061500 Malus domestica HOM05D003066 ORTHO05D004162 1.4e-41 172.6 82 95.1
MD15G1060200 Malus domestica HOM05D003066 ORTHO05D004162 1.4e-41 172.6 82 95.1
Nn8g38884 Nelumbo nucifera HOM05D003066 ORTHO05D004162 1.4e-41 172.6 82 95.1
GSVIVG01035408001 Vitis vinifera HOM05D003066 ORTHO05D004162 1.4e-41 172.6 82 95.1
Actinidia18188 Actinidia chinensis HOM05D003066 ORTHO05D004162 1.8e-41 172.2 82 95.1
arahy.Tifrunner.gnm1.ann1.9IV7G6 Arachis hypogaea HOM05D003066 ORTHO05D004162 1.8e-41 172.2 82 95.1
arahy.Tifrunner.gnm1.ann1.W9U8CY Arachis hypogaea HOM05D003066 ORTHO05D004162 1.8e-41 172.2 82 95.1
CiPaw.15G039000 Carya illinoinensis HOM05D003066 ORTHO05D004162 1.8e-41 172.2 82 95.1
CDE07G0857 Ceratophyllum demersum HOM05D003066 ORTHO05D004162 1.8e-41 172.2 82 95.1
Dinv22899 Davidia involucrata HOM05D003066 ORTHO05D004162 1.8e-41 172.2 82 95.1
Glyma.04G051200 Glycine max HOM05D003066 ORTHO05D004162 1.8e-41 172.2 82 95.1
Glyma.06G052100 Glycine max HOM05D003066 ORTHO05D004162 1.8e-41 172.2 82 93.9
MBI01_g09957_MAGBIO Magnolia biondii HOM05D003066 ORTHO05D004162 1.8e-41 172.2 82 95.1
MBI04_g34129_MAGBIO Magnolia biondii HOM05D003066 ORTHO05D004162 1.8e-41 172.2 82 95.1
Phvul.001G035500 Phaseolus vulgaris HOM05D003066 ORTHO05D004162 1.8e-41 172.2 82 93.9
Phvul.009G077400 Phaseolus vulgaris HOM05D003066 ORTHO05D004162 1.8e-41 172.2 82 95.1
Prupe.1G412100 Prunus persica HOM05D003066 ORTHO05D004162 1.8e-41 172.2 82 95.1
Sed0010471 Sechium edule HOM05D003066 ORTHO05D004162 1.8e-41 172.2 82 95.1
vmacro00142 Vaccinium macrocarpon HOM05D003066 ORTHO05D004162 1.8e-41 172.2 82 95.1
vmacro14247 Vaccinium macrocarpon HOM05D003066 ORTHO05D004162 1.8e-41 172.2 82 95.1
HPP92_006466 Vanilla planifolia HOM05D003066 ORTHO05D004162 1.8e-41 172.2 82 95.1
VMungo1309G0513 Vigna mungo HOM05D003066 ORTHO05D004162 1.8e-41 172.2 82 95.1
ECA240G4675 Erigeron canadensis HOM05D003066 ORTHO05D004162 2.4e-41 171.8 82 93.9
HanXRQChr17g0538191 Helianthus annuus HOM05D003066 ORTHO05D004162 2.4e-41 171.8 82 93.9
Lsat_1_v5_gn_3_24441 Lactuca sativa HOM05D003066 ORTHO05D004162 2.4e-41 171.8 82 93.9
Lsat_1_v5_gn_5_45900 Lactuca sativa HOM05D003066 ORTHO05D004162 2.4e-41 171.8 82 93.9
Ca_13165_v3 Cicer arietinum L. HOM05D003066 ORTHO05D004162 4.0e-41 171.0 82 93.9
DCAR_003129 Daucus carota HOM05D003066 ORTHO05D004162 4.0e-41 171.0 82 92.7
Dinv27984 Davidia involucrata HOM05D003066 ORTHO05D004162 4.0e-41 171.0 82 93.9
Lj7C275T3 Lonicera japonica HOM05D003066 ORTHO05D004162 4.0e-41 171.0 82 92.7
Medtr1g016230 Medicago truncatula HOM05D003066 ORTHO05D004162 4.0e-41 171.0 82 93.9
Psat6g020400 Pisum sativum HOM05D003066 ORTHO05D004162 4.0e-41 171.0 82 93.9
Actinidia18185 Actinidia chinensis HOM05D003066 ORTHO05D004162 5.3e-41 170.6 82 93.9
CANSAT25G3853 Cannabis sativa HOM05D003066 ORTHO05D004162 5.3e-41 170.6 82 92.7
MELO3C010754.2 Cucumis melo HOM05D003066 ORTHO05D004162 5.3e-41 170.6 82 93.9
HanXRQChr13g0410471 Helianthus annuus HOM05D003066 ORTHO05D004162 5.3e-41 170.6 82 93.9
TAR383G0156 Trochodendron aralioides HOM05D003066 ORTHO05D004162 5.3e-41 170.6 82 93.9
TAR626G0016 Trochodendron aralioides HOM05D003066 ORTHO05D004162 5.3e-41 170.6 82 93.9
VMungo0647G0915 Vigna mungo HOM05D003066 ORTHO05D004162 5.3e-41 170.6 82 92.7
ClCG08G017010 Citrullus lanatus HOM05D003066 ORTHO05D004162 6.9e-41 170.2 82 92.7
Lj5g0020573 Lotus japonicus HOM05D003066 ORTHO05D004162 6.9e-41 170.2 82 92.7
QL02p062818 Quercus lobata HOM05D003066 ORTHO05D004162 6.9e-41 170.2 80 95.0
Rhsim11G0044200 Rhododendron simsii HOM05D003066 ORTHO05D004162 6.9e-41 170.2 82 92.7
TPR.G13011 Trifolium pratense HOM05D003066 ORTHO05D004162 6.9e-41 170.2 82 92.7
Glyma.14G094700 Glycine max HOM05D003066 ORTHO05D004162 9.0e-41 169.9 82 92.7
Rhsim07G0142300 Rhododendron simsii HOM05D003066 ORTHO05D004162 9.0e-41 169.9 82 93.9
Lalb_Chr14g0367671 Lupinus albus HOM05D003066 ORTHO05D004162 1.2e-40 169.5 82 93.9
GSVIVG01015211001 Vitis vinifera HOM05D003066 ORTHO05D004162 1.2e-40 169.5 82 92.7
Atru.chr7.1062 Acer truncatum HOM05D003066 ORTHO05D004162 1.5e-40 169.1 82 93.9
Ciclev10007310m.g Citrus clementina HOM05D003066 ORTHO05D004162 1.5e-40 169.1 82 93.9
Peaxi162Scf00477g00214 Petunia axillaris HOM05D003066 ORTHO05D004162 1.5e-40 169.1 82 93.9
EL10Ac2g03886 Beta vulgaris HOM05D003066 ORTHO05D004162 2.0e-40 168.7 82 93.9
CSS0005439 Camellia sinensis var. sinensis HOM05D003066 ORTHO05D004162 2.0e-40 168.7 82 93.9
CSS0037920 Camellia sinensis var. sinensis HOM05D003066 ORTHO05D004162 2.0e-40 168.7 82 93.9
Duzib150G0748 Durio zibethinus HOM05D003066 ORTHO05D004162 2.0e-40 168.7 82 93.9
Duzib187G0606 Durio zibethinus HOM05D003066 ORTHO05D004162 2.0e-40 168.7 82 93.9
Migut.E01566 Erythranthe guttata HOM05D003066 ORTHO05D004162 2.0e-40 168.7 82 93.9
FvH4_2g31940 Fragaria vesca HOM05D003066 ORTHO05D004162 2.0e-40 168.7 82 92.7
FAN15G2565 Fragaria x ananassa HOM05D003066 ORTHO05D004162 2.0e-40 168.7 82 92.7
FAN20G2891 Fragaria x ananassa HOM05D003066 ORTHO05D004162 2.0e-40 168.7 82 92.7
FAN24G0169 Fragaria x ananassa HOM05D003066 ORTHO05D004162 2.0e-40 168.7 82 92.7
FAN27G1891 Fragaria x ananassa HOM05D003066 ORTHO05D004162 2.0e-40 168.7 82 92.7
Manes.16G080300 Manihot esculenta HOM05D003066 ORTHO05D004162 2.0e-40 168.7 82 93.9
RcHm_v2.0_Chr6g0310901 Rosa chinensis HOM05D003066 ORTHO05D004162 2.0e-40 168.7 82 92.7
SalBow1G0202 Salvia bowleyana HOM05D003066 ORTHO05D004162 2.0e-40 168.7 82 92.7
Hund03339 Selenicereus undatus HOM05D003066 ORTHO05D004162 2.0e-40 168.7 82 93.9
Thecc.09G053700 Theobroma cacao HOM05D003066 ORTHO05D004162 2.0e-40 168.7 82 93.9
Ah.10g034390 Amaranthus hybridus HOM05D003066 ORTHO05D004162 2.6e-40 168.3 82 92.7
Gohir.A06G089300 Gossypium hirsutum HOM05D003066 ORTHO05D004162 2.6e-40 168.3 82 93.9
Gohir.D06G087600 Gossypium hirsutum HOM05D003066 ORTHO05D004162 2.6e-40 168.3 82 93.9
Gorai.010G101200 Gossypium raimondii HOM05D003066 ORTHO05D004162 2.6e-40 168.3 82 93.9
Hma1.2p1_0482F.1_g162430 Hydrangea macrophylla HOM05D003066 ORTHO05D004162 2.6e-40 168.3 82 92.7
Nitab4.5_0001367g0020 Nicotiana tabacum HOM05D003066 ORTHO05D004162 2.6e-40 168.3 82 93.9
Nitab4.5_0003627g0010 Nicotiana tabacum HOM05D003066 ORTHO05D004162 2.6e-40 168.3 82 93.9
Oeu003985.1 Olea europaea HOM05D003066 ORTHO05D004162 2.6e-40 168.3 82 93.9
SGA_v2.0_scaffold169G38693 Striga asiatica HOM05D003066 ORTHO05D004162 2.6e-40 168.3 82 93.9
unitig_26.g9798 Utricularia gibba HOM05D003066 ORTHO05D004162 2.6e-40 168.3 82 93.9
unitig_749.g13830 Utricularia gibba HOM05D003066 ORTHO05D004162 2.6e-40 168.3 82 93.9
AUR62009150 Chenopodium quinoa HOM05D003066 ORTHO05D004162 3.4e-40 167.9 82 93.9
AUR62022077 Chenopodium quinoa HOM05D003066 ORTHO05D004162 3.4e-40 167.9 82 93.9
Cc08_g10590 Coffea canephora HOM05D003066 ORTHO05D004162 3.4e-40 167.9 82 92.7
Eucgr.C00646 Eucalyptus grandis HOM05D003066 ORTHO05D004162 3.4e-40 167.9 82 92.7
HanXRQChr06g0173861 Helianthus annuus HOM05D003066 ORTHO05D004162 3.4e-40 167.9 82 92.7
PSO210G2602 Papaver somniferum HOM05D003066 ORTHO05D004162 3.4e-40 167.9 82 92.7
PSO210G3975 Papaver somniferum HOM05D003066 ORTHO05D004162 3.4e-40 167.9 82 92.7
ECA246G1238 Erigeron canadensis HOM05D003066 ORTHO05D004162 4.5e-40 167.5 82 92.7
Gohir.A05G042300 Gossypium hirsutum HOM05D003066 ORTHO05D004162 4.5e-40 167.5 82 92.7
Gohir.D05G044000 Gossypium hirsutum HOM05D003066 ORTHO05D004162 4.5e-40 167.5 82 92.7
Gorai.009G045100 Gossypium raimondii HOM05D003066 ORTHO05D004162 4.5e-40 167.5 82 92.7
Solyc08g065220.3 Solanum lycopersicum HOM05D003066 ORTHO05D004162 4.5e-40 167.5 82 92.7
TWI32G0839 Tripterygium wilfordii HOM05D003066 ORTHO05D004162 4.5e-40 167.5 82 92.7
MSTRG.14054 Avicennia marina HOM05D003066 ORTHO05D004162 5.8e-40 167.2 82 91.5
CAN.G117.1 Capsicum annuum HOM05D003066 ORTHO05D004162 5.8e-40 167.2 82 92.7
Sopen08g018830 Solanum pennellii HOM05D003066 ORTHO05D004162 5.8e-40 167.2 82 92.7
PGSC0003DMG400029938 Solanum tuberosum HOM05D003066 ORTHO05D004162 5.8e-40 167.2 82 92.7
Aa31LG5G9680 Aethionema arabicum HOM05D003066 ORTHO05D004162 7.6e-40 166.8 82 91.5
Duzib168G0564 Durio zibethinus HOM05D003066 ORTHO05D004162 7.6e-40 166.8 82 92.7
Eucgr.C03047 Eucalyptus grandis HOM05D003066 ORTHO05D004162 7.6e-40 166.8 82 92.7
THA.LOC104799166 Tarenaya hassleriana HOM05D003066 ORTHO05D004162 7.6e-40 166.8 82 92.7
ATR0749G006 Amborella trichopoda HOM05D003066 ORTHO05D004162 9.9e-40 166.4 82 91.5
Zm00001eb406880 Zea mays HOM05D003066 ORTHO05D004162 9.9e-40 166.4 82 91.5
CAN.G208.91 Capsicum annuum HOM05D003066 ORTHO05D004162 1.3e-39 166.0 82 91.5
Migut.A00136 Erythranthe guttata HOM05D003066 ORTHO05D004162 1.3e-39 166.0 82 92.7
Os01g0711400 Oryza sativa ssp. japonica HOM05D003066 ORTHO05D004162 1.3e-39 166.0 82 90.2
PGR031G0611 Punica granatum HOM05D003066 ORTHO05D004162 1.3e-39 166.0 82 92.7
QL02p001223 Quercus lobata HOM05D003066 ORTHO05D004162 1.3e-39 166.0 82 92.7
Hund19452 Selenicereus undatus HOM05D003066 ORTHO05D004162 1.3e-39 166.0 82 91.5
Potri.006G229300 Populus trichocarpa HOM05D003066 ORTHO05D004162 1.7e-39 165.6 82 91.5
Sabra06G0177800 Salix brachista HOM05D003066 ORTHO05D004162 1.7e-39 165.6 82 91.5
Sc09g0009820 Simmondsia chinensis HOM05D003066 ORTHO05D004162 1.7e-39 165.6 82 91.5
TWI34G1165 Tripterygium wilfordii HOM05D003066 ORTHO05D004162 1.7e-39 165.6 82 91.5
COL.COLO4_21057 Corchorus olitorius HOM05D003066 ORTHO05D004162 2.2e-39 165.2 82 90.2
MSTRG.1683 Avicennia marina HOM05D003066 ORTHO05D004162 2.9e-39 164.9 82 91.5
BcaC09g52098 Brassica carinata HOM05D003066 ORTHO05D004162 2.9e-39 164.9 82 91.5
A01p05180 Brassica napus HOM05D003066 ORTHO05D004162 2.9e-39 164.9 82 91.5
C01p05670 Brassica napus HOM05D003066 ORTHO05D004162 2.9e-39 164.9 82 91.5
BolC1t00546H Brassica oleracea HOM05D003066 ORTHO05D004162 2.9e-39 164.9 82 91.5
BraA01t00501Z Brassica rapa HOM05D003066 ORTHO05D004162 2.9e-39 164.9 82 91.5
Os06g0611900 Oryza sativa ssp. japonica HOM05D003066 ORTHO05D004162 2.9e-39 164.9 82 90.2
THA.LOC104803730 Tarenaya hassleriana HOM05D003066 ORTHO05D004162 2.9e-39 164.9 82 90.2
CARHR241020 Cardamine hirsuta HOM05D003066 ORTHO05D004162 3.8e-39 164.5 82 90.2
Thhalv10024257m.g Eutrema salsugineum HOM05D003066 ORTHO05D004162 3.8e-39 164.5 82 90.2
Mapoly0068s0042 Marchantia polymorpha HOM05D003066 ORTHO05D004162 4.9e-39 164.1 82 89.0
SEGI_37657 Sequoiadendron giganteum HOM05D003066 ORTHO05D004162 6.4e-39 163.7 82 91.5
Carub.0004s0590 Capsella rubella HOM05D003066 ORTHO05D004162 8.4e-39 163.3 82 89.0
Sp7g30770 Schrenkiella parvula HOM05D003066 ORTHO05D004162 8.4e-39 163.3 82 90.2
AL4G18230 Arabidopsis lyrata HOM05D003066 ORTHO05D004162 1.1e-38 162.9 82 89.0
AT2G26080 Arabidopsis thaliana HOM05D003066 ORTHO05D004162 1.1e-38 162.9 82 89.0
CARHR114810 Cardamine hirsuta HOM05D003066 ORTHO05D004162 1.1e-38 162.9 82 89.0
Thhalv10001891m.g Eutrema salsugineum HOM05D003066 ORTHO05D004162 1.1e-38 162.9 82 89.0
Sp4g05960 Schrenkiella parvula HOM05D003066 ORTHO05D004162 1.1e-38 162.9 82 89.0
AL7G18660 Arabidopsis lyrata HOM05D003066 ORTHO05D004162 1.4e-38 162.5 82 89.0
AT4G33010 Arabidopsis thaliana HOM05D003066 ORTHO05D004162 1.4e-38 162.5 82 89.0
SEGI_16222 Sequoiadendron giganteum HOM05D003066 ORTHO05D004162 1.4e-38 162.5 80 92.5
Carub.0007s0747 Capsella rubella HOM05D003066 ORTHO05D004162 3.2e-38 161.4 82 89.0
SMO201G0119 Selaginella moellendorffii HOM05D003066 ORTHO05D004162 5.4e-38 160.6 82 89.0
Pp3c16_4520 Physcomitrium patens HOM05D003066 ORTHO05D004162 1.2e-37 159.5 82 90.2
Pp3c16_4550 Physcomitrium patens HOM05D003066 ORTHO05D004162 1.2e-37 159.5 82 90.2
Pp3c27_5030 Physcomitrium patens HOM05D003066 ORTHO05D004162 1.2e-37 159.5 82 90.2
Lj7C271T2 Lonicera japonica HOM05D003066 ORTHO05D004162 2.1e-37 158.7 72 97.2
Oeu009352.1 Olea europaea HOM05D003066 ORTHO05D004162 4.6e-37 157.5 79 91.1
Cre12.g534800 Chlamydomonas reinhardtii HOM05D003066 ORTHO05D004162 1.0e-36 156.4 82 85.4
PRCOL_00000289 Prasinoderma coloniale HOM05D003066 ORTHO05D004162 3.0e-36 154.8 80 86.2
MCO15G616 Micromonas commoda HOM05D003066 ORTHO05D004162 3.7e-34 147.9 77 83.1
Cfa026270 Carpinus fangiana HOM05D003066 ORTHO05D004162 7.6e-32 140.2 82 73.2
Hma1.2p1_1957F.1_g309050 Hydrangea macrophylla HOM05D003066 ORTHO05D004162 3.8e-31 137.9 145 51.0
Lsat_1_v5_gn_5_188440 Lactuca sativa HOM05D003066 ORTHO05D004162 3.9e-28 127.9 63 90.5
Lsat_1_v5_gn_7_44401 Lactuca sativa HOM05D003066 ORTHO05D004162 1.1e-25 119.8 59 89.8
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 1.1e-25 119.8 59 89.8
Haze_27049 Corylus avellana HOM05D003066 ORTHO05D004162 2.4e-25 118.6 73 69.9
Lsat_1_v5_gn_7_104540 Lactuca sativa HOM05D003066 ORTHO05D004162 6.9e-25 117.1 59 88.1
Lsat_1_v5_gn_9_73621 Lactuca sativa HOM05D003066 ORTHO05D004162 6.9e-25 117.1 56 91.1
Lsat_1_v5_gn_5_26441 Lactuca sativa HOM05D003066 ORTHO05D004162 2.6e-24 115.2 59 86.4
CBR_g3314 Chara braunii HOM05D003066 ORTHO05D004162 5.8e-24 114.0 55 90.9
Lsat_1_v5_gn_5_141420 Lactuca sativa HOM05D003066 ORTHO05D004162 1.0e-15 86.7 41 87.8
CsaV3_2G025570 Cucumis sativus L. HOM05D003066 ORTHO05D004162 1.2e-08 63.2 30 93.3
SGA_v2.0_scaffold163G38030 Striga asiatica HOM05D003066 ORTHO05D004162 5.9e-08 60.8 28 96.4


User provided reference genes

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