Gene: Pp3c16_4550

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c16_4550
  • Transcript Identifier Pp3c16_4550V3.1
  • Gene Type Coding gene
  • Location Chr16 : 3174769-3179529 : negative

Gene Family Information

  • ID HOM05D003066
  • #Genes/#Species 224/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c16_4550V3.1
  • pacid 32985588
  • alias Phypa_176216
  • alias Phpat.016G016600
  • alias Pp1s15_499V6
  • uniprot A9RLL8

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT4G33010
GO:0019464
IBA
GOA Databaseglycine decarboxylation via glycine cleavage system
GO:0006546
IEA
GOA Databaseglycine catabolic process
GO:0006546
IEA
InterProglycine catabolic process
GO:0006544
IEA
GOA Databaseglycine metabolic process
GO:0006544
IEA
InterProglycine metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G33010
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G33010
GO:0005524
ISO
PLAZA Integrative OrthologyATP binding AT2G26080
GO:0030170
IBA
GOA Databasepyridoxal phosphate binding
GO:0016594
IBA
GOA Databaseglycine binding
GO:0004375
IBA
IEA
GOA Databaseglycine dehydrogenase (decarboxylating) activity
GO:0004375
IEA
InterProglycine dehydrogenase (decarboxylating) activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016491
IEA
GOA Databaseoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IBA
IEA
GOA Databasemitochondrion
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT4G33010
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G33010
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT4G33010
GO:0048046
IBA
GOA Databaseapoplast
GO:0009941
IBA
GOA Databasechloroplast envelope
GO:0005960
IBA
GOA Databaseglycine cleavage complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015422 Pyridoxal phosphate-dependent transferase, small domain
IPR020581 Glycine cleavage system P protein
IPR015424 Pyridoxal phosphate-dependent transferase
IPR003437 Glycine dehydrogenase (decarboxylating)
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
Mapman id Description
1.3.4.1 Photosynthesis.photorespiration.glycine decarboxylase complex.glycine dehydrogenase component P-protein