Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p050982 Quercus lobata HOM05D004284 ORTHO05D006610 4.5e-73 277.7 130 100.0
QL02p020532 Quercus lobata HOM05D004284 ORTHO05D006610 3.8e-72 274.6 130 99.2
QL11p046610 Quercus lobata HOM05D004284 ORTHO05D006610 1.7e-64 249.2 119 96.6
Haze_02227 Corylus avellana HOM05D004284 ORTHO05D006610 2.1e-46 189.1 123 71.5
Cfa005121 Carpinus fangiana HOM05D004284 ORTHO05D006610 6.1e-46 187.6 123 71.5
Dinv23446 Davidia involucrata HOM05D004284 ORTHO05D006610 1.0e-45 186.8 119 72.3
CiPaw.05G074300 Carya illinoinensis HOM05D004284 ORTHO05D006610 2.6e-44 182.2 119 70.6
MD05G1054400 Malus domestica HOM05D004284 ORTHO05D006610 9.8e-44 180.3 119 72.3
Ciclev10027934m.g Citrus clementina HOM05D004284 ORTHO05D006610 4.9e-43 177.9 121 68.6
Prupe.8G082800 Prunus persica HOM05D004284 ORTHO05D006610 4.9e-43 177.9 120 70.8
RcHm_v2.0_Chr6g0268371 Rosa chinensis HOM05D004284 ORTHO05D006610 4.9e-43 177.9 118 69.5
CSS0013523 Camellia sinensis var. sinensis HOM05D004284 ORTHO05D006610 1.1e-42 176.8 122 67.2
MD10G1062000 Malus domestica HOM05D004284 ORTHO05D006610 1.1e-42 176.8 119 71.4
PGR042G3704 Punica granatum HOM05D004284 ORTHO05D006610 3.2e-42 175.3 122 67.2
CSS0041983 Camellia sinensis var. sinensis HOM05D004284 ORTHO05D006610 7.0e-42 174.1 120 66.7
CANSAT11G1394 Cannabis sativa HOM05D004284 ORTHO05D006610 7.0e-42 174.1 120 69.2
arahy.Tifrunner.gnm1.ann1.6AD899 Arachis hypogaea HOM05D004284 ORTHO05D006610 2.0e-41 172.6 124 66.1
arahy.Tifrunner.gnm1.ann1.835YPG Arachis hypogaea HOM05D004284 ORTHO05D006610 2.0e-41 172.6 121 67.8
FAN15G2871 Fragaria x ananassa HOM05D004284 ORTHO05D006610 2.7e-41 172.2 118 68.6
FAN24G2266 Fragaria x ananassa HOM05D004284 ORTHO05D006610 4.6e-41 171.4 118 67.8
Atru.chr5.3162 Acer truncatum HOM05D004284 ORTHO05D006610 6.0e-41 171.0 123 64.2
Atru.chr5.3174 Acer truncatum HOM05D004284 ORTHO05D006610 6.0e-41 171.0 123 64.2
CsaV3_7G000530 Cucumis sativus L. HOM05D004284 ORTHO05D006610 7.8e-41 170.6 122 65.6
FAN20G0619 Fragaria x ananassa HOM05D004284 ORTHO05D006610 7.8e-41 170.6 118 67.8
ClCG02G004440 Citrullus lanatus HOM05D004284 ORTHO05D006610 1.0e-40 170.2 128 64.8
MELO3C013406.2 Cucumis melo HOM05D004284 ORTHO05D006610 1.0e-40 170.2 122 65.6
Sed0001411 Sechium edule HOM05D004284 ORTHO05D006610 1.3e-40 169.9 122 65.6
FvH4_2g10690 Fragaria vesca HOM05D004284 ORTHO05D006610 1.7e-40 169.5 118 66.9
Lj1g0012810 Lotus japonicus HOM05D004284 ORTHO05D006610 3.0e-40 168.7 119 63.9
Potri.009G125500 Populus trichocarpa HOM05D004284 ORTHO05D006610 6.6e-40 167.5 117 69.2
TPR.G32210 Trifolium pratense HOM05D004284 ORTHO05D006610 8.6e-40 167.2 118 67.8
Ca_15330_v3 Cicer arietinum L. HOM05D004284 ORTHO05D006610 3.3e-39 165.2 120 63.3
Thecc.02G073500 Theobroma cacao HOM05D004284 ORTHO05D006610 5.6e-39 164.5 118 64.4
Actinidia00120 Actinidia chinensis HOM05D004284 ORTHO05D006610 7.3e-39 164.1 122 61.5
Duzib052G1007 Durio zibethinus HOM05D004284 ORTHO05D006610 7.3e-39 164.1 119 63.9
Lsat_1_v5_gn_8_126921 Lactuca sativa HOM05D004284 ORTHO05D006610 7.3e-39 164.1 120 61.7
TWI75G0546 Tripterygium wilfordii HOM05D004284 ORTHO05D006610 9.5e-39 163.7 119 64.7
Eucgr.G01740 Eucalyptus grandis HOM05D004284 ORTHO05D006610 1.6e-38 162.9 120 60.0
Gorai.001G243900 Gossypium raimondii HOM05D004284 ORTHO05D006610 1.6e-38 162.9 118 63.6
Manes.11G081200 Manihot esculenta HOM05D004284 ORTHO05D006610 1.6e-38 162.9 121 63.6
Sabra09G0096500 Salix brachista HOM05D004284 ORTHO05D006610 2.1e-38 162.5 120 65.0
Glyma.04G007400 Glycine max HOM05D004284 ORTHO05D006610 2.8e-38 162.2 122 63.1
SGA_v2.0_scaffold58G20431 Striga asiatica HOM05D004284 ORTHO05D006610 3.6e-38 161.8 129 58.9
Actinidia20651 Actinidia chinensis HOM05D004284 ORTHO05D006610 4.7e-38 161.4 116 63.8
COL.COLO4_10617 Corchorus olitorius HOM05D004284 ORTHO05D006610 4.7e-38 161.4 119 62.2
DCAR_022791 Daucus carota HOM05D004284 ORTHO05D006610 4.7e-38 161.4 121 60.3
Rhsim11G0184600 Rhododendron simsii HOM05D004284 ORTHO05D006610 4.7e-38 161.4 123 61.0
MSTRG.20021 Avicennia marina HOM05D004284 ORTHO05D006610 6.2e-38 161.0 122 61.5
Gohir.D13G090800 Gossypium hirsutum HOM05D004284 ORTHO05D006610 6.2e-38 161.0 118 62.7
Oeu055646.2 Olea europaea HOM05D004284 ORTHO05D006610 1.1e-37 160.2 119 63.9
Gohir.A13G086645 Gossypium hirsutum HOM05D004284 ORTHO05D006610 1.8e-37 159.5 118 63.6
Cpa.g.sc150.6 Carica papaya HOM05D004284 ORTHO05D006610 3.1e-37 158.7 120 61.7
MBI05_g26520_MAGBIO Magnolia biondii HOM05D004284 ORTHO05D006610 3.1e-37 158.7 120 64.2
TWI79G1346 Tripterygium wilfordii HOM05D004284 ORTHO05D006610 3.1e-37 158.7 119 60.5
Sc18g0005440 Simmondsia chinensis HOM05D004284 ORTHO05D006610 5.2e-37 157.9 118 61.0
TWI79G0275 Tripterygium wilfordii HOM05D004284 ORTHO05D006610 6.8e-37 157.5 119 59.7
Duzib132G0815 Durio zibethinus HOM05D004284 ORTHO05D006610 8.9e-37 157.1 119 59.7
Peaxi162Scf00362g11100 Petunia axillaris HOM05D004284 ORTHO05D006610 8.9e-37 157.1 119 58.8
Hund00182 Selenicereus undatus HOM05D004284 ORTHO05D006610 8.9e-37 157.1 120 61.7
TAR376G0598 Trochodendron aralioides HOM05D004284 ORTHO05D006610 8.9e-37 157.1 122 60.7
ECA233G5694 Erigeron canadensis HOM05D004284 ORTHO05D006610 1.2e-36 156.8 119 58.8
Nitab4.5_0002096g0020 Nicotiana tabacum HOM05D004284 ORTHO05D006610 1.2e-36 156.8 118 63.6
Lj5A188T39 Lonicera japonica HOM05D004284 ORTHO05D006610 2.6e-36 155.6 118 62.7
Hund00174 Selenicereus undatus HOM05D004284 ORTHO05D006610 2.6e-36 155.6 120 60.8
GSVIVG01024158001 Vitis vinifera HOM05D004284 ORTHO05D006610 9.8e-36 153.7 122 61.5
Sopen01g052620 Solanum pennellii HOM05D004284 ORTHO05D006610 1.3e-35 153.3 118 61.9
vmacro02047 Vaccinium macrocarpon HOM05D004284 ORTHO05D006610 1.3e-35 153.3 119 58.8
Nn6g32279 Nelumbo nucifera HOM05D004284 ORTHO05D006610 6.4e-35 151.0 119 59.7
Solyc01g110490.4 Solanum lycopersicum HOM05D004284 ORTHO05D006610 6.4e-35 151.0 121 60.3
CAN.G1329.2 Capsicum annuum HOM05D004284 ORTHO05D006610 8.3e-35 150.6 116 61.2
HanXRQChr17g0557281 Helianthus annuus HOM05D004284 ORTHO05D006610 8.3e-35 150.6 120 58.3
AUR62016852 Chenopodium quinoa HOM05D004284 ORTHO05D006610 1.1e-34 150.2 116 57.8
Ah.01g018640 Amaranthus hybridus HOM05D004284 ORTHO05D006610 1.4e-34 149.8 119 58.0
PGSC0003DMG400001658 Solanum tuberosum HOM05D004284 ORTHO05D006610 1.4e-34 149.8 118 61.0
Migut.B00123 Erythranthe guttata HOM05D004284 ORTHO05D006610 2.4e-34 149.1 123 56.9
THA.LOC104824786 Tarenaya hassleriana HOM05D004284 ORTHO05D006610 2.4e-34 149.1 118 60.2
Aa31LG6G16360 Aethionema arabicum HOM05D004284 ORTHO05D006610 3.2e-34 148.7 118 61.0
EL10Ac9g21612 Beta vulgaris HOM05D004284 ORTHO05D006610 4.1e-34 148.3 120 56.7
AUR62010367 Chenopodium quinoa HOM05D004284 ORTHO05D006610 9.2e-34 147.1 116 56.0
Thhalv10024574m.g Eutrema salsugineum HOM05D004284 ORTHO05D006610 1.2e-33 146.7 118 60.2
CARHR247870 Cardamine hirsuta HOM05D004284 ORTHO05D006610 1.6e-33 146.4 120 57.5
PSO675G4636 Papaver somniferum HOM05D004284 ORTHO05D006610 2.1e-33 146.0 118 59.3
Sp7g36950 Schrenkiella parvula HOM05D004284 ORTHO05D006610 2.1e-33 146.0 118 56.8
Phvul.009G002300 Phaseolus vulgaris HOM05D004284 ORTHO05D006610 2.7e-33 145.6 119 59.7
SHI05642 Sapria himalayana HOM05D004284 ORTHO05D006610 2.7e-33 145.6 117 59.0
AL7G10770 Arabidopsis lyrata HOM05D004284 ORTHO05D006610 4.6e-33 144.8 118 56.8
Carub.0007s0074 Capsella rubella HOM05D004284 ORTHO05D006610 1.7e-32 142.9 118 54.2
PSO541G2222 Papaver somniferum HOM05D004284 ORTHO05D006610 2.3e-32 142.5 119 57.1
Peaxi162Scf00016g00034 Petunia axillaris HOM05D004284 ORTHO05D006610 6.6e-32 141.0 105 58.1
BolC1t00022H Brassica oleracea HOM05D004284 ORTHO05D006610 1.5e-31 139.8 118 55.9
A01p00130 Brassica napus HOM05D004284 ORTHO05D006610 1.9e-31 139.4 118 54.2
C01p00170 Brassica napus HOM05D004284 ORTHO05D006610 1.9e-31 139.4 118 55.9
AT4G38890 Arabidopsis thaliana HOM05D004284 ORTHO05D006610 2.5e-31 139.0 118 56.8
Os04g0117600 Oryza sativa ssp. japonica HOM05D004284 ORTHO05D006610 4.3e-31 138.3 116 54.3
SEGI_09605 Sequoiadendron giganteum HOM05D004284 ORTHO05D006610 4.3e-31 138.3 119 52.9
VMungo1309G1744 Vigna mungo HOM05D004284 ORTHO05D006610 4.3e-31 138.3 125 55.2
BraA01t00017Z Brassica rapa HOM05D004284 ORTHO05D006610 1.6e-30 136.3 118 53.4
CDE02G2842 Ceratophyllum demersum HOM05D004284 ORTHO05D006610 3.6e-30 135.2 119 57.1
Mapoly0159s0020 Marchantia polymorpha HOM05D004284 ORTHO05D006610 3.6e-30 135.2 124 54.0
Pp3c4_14410 Physcomitrium patens HOM05D004284 ORTHO05D006610 3.6e-30 135.2 126 53.2
ATR0147G023 Amborella trichopoda HOM05D004284 ORTHO05D006610 1.4e-29 133.3 120 51.7
Medtr3g117580 Medicago truncatula HOM05D004284 ORTHO05D006610 1.5e-28 129.8 119 53.8
HPP92_014972 Vanilla planifolia HOM05D004284 ORTHO05D006610 2.2e-27 125.9 118 48.3
AagrBONN_evm.TU.Sc2ySwM_228.2393 Anthoceros agrestis HOM05D004284 ORTHO05D006610 3.7e-27 125.2 123 51.2
Nitab4.5_0010885g0030 Nicotiana tabacum HOM05D004284 ORTHO05D006610 4.9e-27 124.8 94 64.9
Aqoxy3G00712 Aquilegia oxysepala HOM05D004284 ORTHO05D006610 1.1e-26 123.6 119 54.6
SMO119G0149 Selaginella moellendorffii HOM05D004284 ORTHO05D006610 5.4e-26 121.3 121 46.3
SMO119G0196 Selaginella moellendorffii HOM05D004284 ORTHO05D006610 5.4e-26 121.3 124 45.2
Zm00001eb419910 Zea mays HOM05D004284 ORTHO05D006610 7.1e-26 120.9 120 47.5
RcHm_v2.0_Chr6g0271641 Rosa chinensis HOM05D004284 ORTHO05D006610 1.2e-25 120.2 81 70.4
Cc02_g16820 Coffea canephora HOM05D004284 ORTHO05D006610 2.7e-25 119.0 117 53.0
Lalb_Chr11g0061291 Lupinus albus HOM05D004284 ORTHO05D006610 9.5e-23 110.5 118 45.8
Gorai.004G070900 Gossypium raimondii HOM05D004284 ORTHO05D006610 4.7e-22 108.2 80 63.8
Glyma.07G116066 Glycine max HOM05D004284 ORTHO05D006610 5.2e-21 104.8 83 55.4
RcHm_v2.0_Chr6g0268431 Rosa chinensis HOM05D004284 ORTHO05D006610 2.1e-17 92.8 65 69.2
PRCOL_00002812 Prasinoderma coloniale HOM05D004284 ORTHO05D006610 1.5e-15 86.7 122 37.7
Actinidia27851 Actinidia chinensis HOM05D004284 ORTHO05D019443 1.7e-11 73.2 54 53.7
MCO09G016 Micromonas commoda HOM05D004284 ORTHO05D006610 3.2e-10 68.9 154 30.5
CBR_g29609 Chara braunii HOM05D004284 ORTHO05D006610 4.2e-10 68.6 74 39.2
RcHm_v2.0_Chr6g0271631 Rosa chinensis HOM05D004284 ORTHO05D019443 6.6e-08 61.2 37 64.9
unitig_22.g6224 Utricularia gibba HOM05D004284 ORTHO05D006610 5.6e-07 58.2 46 69.6
CSS0028050 Camellia sinensis var. sinensis HOM05D004284 ORTHO05D006610 1.6e-06 56.6 29 89.7


User provided reference genes

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