Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p046262 Quercus lobata HOM05D004199 ORTHO05D005905 1.0e-234 816.6 501 100.0
Cfa018630 Carpinus fangiana HOM05D004199 ORTHO05D005905 7.0e-114 415.2 458 64.8
CiPaw.16G003100 Carya illinoinensis HOM05D004199 ORTHO05D005905 4.5e-113 412.5 378 66.7
Haze_17439 Corylus avellana HOM05D004199 ORTHO05D005905 5.0e-112 409.1 458 63.1
Lj6A766T32 Lonicera japonica HOM05D004199 ORTHO05D005905 2.3e-101 373.6 389 60.4
CSS0043668 Camellia sinensis var. sinensis HOM05D004199 ORTHO05D005905 4.0e-101 372.9 389 61.7
MD13G1046700 Malus domestica HOM05D004199 ORTHO05D005905 6.8e-101 372.1 405 57.8
GSVIVG01011955001 Vitis vinifera HOM05D004199 ORTHO05D005905 1.7e-99 367.5 352 64.8
Dinv05796 Davidia involucrata HOM05D004199 ORTHO05D005905 1.8e-98 364.0 376 60.6
TAR623G0314 Trochodendron aralioides HOM05D004199 ORTHO05D005905 2.5e-95 353.6 382 59.2
Manes.04G160500 Manihot esculenta HOM05D004199 ORTHO05D005905 8.0e-94 348.6 394 55.6
RcHm_v2.0_Chr4g0435851 Rosa chinensis HOM05D004199 ORTHO05D005905 3.1e-93 346.7 382 57.9
FAN22G1977 Fragaria x ananassa HOM05D004199 ORTHO05D005905 2.6e-92 343.6 386 57.0
MD16G1048400 Malus domestica HOM05D004199 ORTHO05D005905 4.4e-92 342.8 400 54.8
Eucgr.G02350 Eucalyptus grandis HOM05D004199 ORTHO05D005905 9.8e-92 341.7 398 58.0
ClCG05G023030 Citrullus lanatus HOM05D004199 ORTHO05D005905 1.1e-90 338.2 390 57.7
Psat2g189000 Pisum sativum HOM05D004199 ORTHO05D005905 1.1e-90 338.2 375 60.0
Eucgr.K00868 Eucalyptus grandis HOM05D004199 ORTHO05D005905 1.9e-90 337.4 464 52.2
MELO3C012214.2 Cucumis melo HOM05D004199 ORTHO05D005905 2.0e-89 334.0 391 57.0
Sc17g0004690 Simmondsia chinensis HOM05D004199 ORTHO05D005905 1.0e-88 331.6 385 56.6
FvH4_4g28100 Fragaria vesca HOM05D004199 ORTHO05D005905 2.3e-88 330.5 388 55.9
Lsat_1_v5_gn_4_1641 Lactuca sativa HOM05D004199 ORTHO05D005905 2.3e-88 330.5 363 58.1
vmacro14411 Vaccinium macrocarpon HOM05D004199 ORTHO05D005905 3.0e-88 330.1 344 59.6
CsaV3_5G033970 Cucumis sativus L. HOM05D004199 ORTHO05D005905 1.5e-87 327.8 390 55.9
Sed0023765 Sechium edule HOM05D004199 ORTHO05D005905 1.5e-87 327.8 384 57.0
COL.COLO4_31201 Corchorus olitorius HOM05D004199 ORTHO05D005905 2.5e-87 327.0 466 60.9
FAN12G0509 Fragaria x ananassa HOM05D004199 ORTHO05D005905 2.5e-87 327.0 386 55.2
FAN17G3109 Fragaria x ananassa HOM05D004199 ORTHO05D005905 4.3e-87 326.2 384 56.0
CANSAT56G2350 Cannabis sativa HOM05D004199 ORTHO05D005905 3.6e-86 323.2 380 55.3
Phvul.001G030200 Phaseolus vulgaris HOM05D004199 ORTHO05D005905 6.2e-86 322.4 364 56.3
FAN07G1167 Fragaria x ananassa HOM05D004199 ORTHO05D005905 8.0e-86 322.0 386 54.9
Ca_25946_v3 Cicer arietinum L. HOM05D004199 ORTHO05D005905 5.2e-85 319.3 378 56.3
Glyma.07G227400 Glycine max HOM05D004199 ORTHO05D005905 5.2e-85 319.3 371 57.1
Gorai.011G063300 Gossypium raimondii HOM05D004199 ORTHO05D005905 5.2e-85 319.3 384 57.0
EL10Ac9g22638 Beta vulgaris HOM05D004199 ORTHO05D005905 6.8e-85 318.9 386 53.6
Hma1.2p1_0399F.1_g144220 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 8.9e-85 318.5 377 54.1
Gohir.D10G059300 Gossypium hirsutum HOM05D004199 ORTHO05D005905 1.2e-84 318.2 384 56.8
Gohir.A10G057500 Gossypium hirsutum HOM05D004199 ORTHO05D005905 2.0e-84 317.4 384 56.2
VMungo1383G0908 Vigna mungo HOM05D004199 ORTHO05D005905 2.0e-84 317.4 374 53.7
MBI01_g12859_MAGBIO Magnolia biondii HOM05D004199 ORTHO05D005905 3.4e-84 316.6 377 56.0
Glyma.20G028100 Glycine max HOM05D004199 ORTHO05D005905 4.4e-84 316.2 374 55.1
arahy.Tifrunner.gnm1.ann1.9AQU5H Arachis hypogaea HOM05D004199 ORTHO05D005905 5.8e-84 315.8 381 55.4
HanXRQChr17g0568011 Helianthus annuus HOM05D004199 ORTHO05D005905 8.3e-83 312.0 376 55.6
Rhsim03G0238800 Rhododendron simsii HOM05D004199 ORTHO05D005905 8.3e-83 312.0 392 52.3
Ciclev10014191m.g Citrus clementina HOM05D004199 ORTHO05D005905 2.4e-82 310.5 373 54.4
Nn6g35106 Nelumbo nucifera HOM05D004199 ORTHO05D005905 3.2e-82 310.1 397 53.9
Peaxi162Scf00102g00927 Petunia axillaris HOM05D004199 ORTHO05D005905 7.1e-82 308.9 374 54.0
Cc11_g10620 Coffea canephora HOM05D004199 ORTHO05D005905 3.5e-81 306.6 393 55.2
TWI53G1601 Tripterygium wilfordii HOM05D004199 ORTHO05D005905 6.0e-81 305.8 352 56.8
Hma1.2p1_2265F.1_g318400 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 1.3e-80 304.7 377 52.0
Glyma.07G155300 Glycine max HOM05D004199 ORTHO05D005905 1.7e-80 304.3 376 54.8
Hma1.2p1_0592F.1_g185323 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 2.3e-80 303.9 380 51.8
arahy.Tifrunner.gnm1.ann1.P5TZTU Arachis hypogaea HOM05D004199 ORTHO05D005905 3.9e-80 303.1 403 52.4
Lj3g0002767 Lotus japonicus HOM05D004199 ORTHO05D005905 1.1e-79 301.6 381 54.9
Medtr5g007520 Medicago truncatula HOM05D004199 ORTHO05D005905 4.3e-79 299.7 355 57.2
AUR62044199 Chenopodium quinoa HOM05D004199 ORTHO05D005905 5.6e-79 299.3 373 53.1
Ah.04g153070 Amaranthus hybridus HOM05D004199 ORTHO05D005905 1.2e-78 298.1 385 50.4
Oeu041360.1 Olea europaea HOM05D004199 ORTHO05D005905 1.6e-78 297.7 390 51.5
DCAR_030084 Daucus carota HOM05D004199 ORTHO05D005905 1.4e-77 294.7 361 53.2
Atru.chr6.1864_Atru.chr6.1865 Acer truncatum HOM05D004199 ORTHO05D005905 3.1e-77 293.5 369 53.9
AUR62033048 Chenopodium quinoa HOM05D004199 ORTHO05D005905 4.0e-77 293.1 387 51.7
Lalb_Chr10g0099721 Lupinus albus HOM05D004199 ORTHO05D005905 5.2e-77 292.7 382 53.7
Prupe.1G305200 Prunus persica HOM05D004199 ORTHO05D005905 6.8e-77 292.4 326 59.5
Potri.008G002600 Populus trichocarpa HOM05D004199 ORTHO05D005905 1.5e-76 291.2 412 49.3
PSO339G4136 Papaver somniferum HOM05D004199 ORTHO05D005905 2.0e-76 290.8 378 51.6
SGA_v2.0_scaffold14G06820 Striga asiatica HOM05D004199 ORTHO05D005905 7.6e-76 288.9 388 49.0
Sopen05g005660 Solanum pennellii HOM05D004199 ORTHO05D005905 1.1e-74 285.0 387 50.1
Thecc.10G125100 Theobroma cacao HOM05D004199 ORTHO05D005905 5.4e-74 282.7 384 53.6
unitig_22.g6876 Utricularia gibba HOM05D004199 ORTHO05D005905 7.1e-74 282.3 391 49.6
CAN.G184.89 Capsicum annuum HOM05D004199 ORTHO05D005905 2.1e-73 280.8 369 50.1
PGSC0003DMG400000826 Solanum tuberosum HOM05D004199 ORTHO05D005905 1.0e-72 278.5 385 49.4
Migut.E00297 Erythranthe guttata HOM05D004199 ORTHO05D005905 1.3e-72 278.1 380 46.8
Nitab4.5_0004122g0060 Nicotiana tabacum HOM05D004199 ORTHO05D005905 1.3e-72 278.1 407 48.9
CDE05G0525 Ceratophyllum demersum HOM05D004199 ORTHO05D005905 3.0e-72 276.9 396 48.0
Sabra08G0000600 Salix brachista HOM05D004199 ORTHO05D005905 3.9e-72 276.6 413 49.2
CDE01G0057 Ceratophyllum demersum HOM05D004199 ORTHO05D005905 5.6e-71 272.7 397 48.1
EL10Ac8g19592 Beta vulgaris HOM05D004199 ORTHO05D005905 9.6e-71 271.9 466 43.3
PSO801G0529 Papaver somniferum HOM05D004199 ORTHO05D005905 2.1e-70 270.8 369 49.3
THA.LOC104800384 Tarenaya hassleriana HOM05D004199 ORTHO05D005905 2.1e-70 270.8 364 50.5
Aqoxy2G01512 Aquilegia oxysepala HOM05D004199 ORTHO05D005905 3.6e-70 270.0 409 47.9
Actinidia13675 Actinidia chinensis HOM05D004199 ORTHO05D005905 9.9e-68 261.9 344 55.2
ECA234G0057 Erigeron canadensis HOM05D004199 ORTHO05D005905 1.3e-67 261.5 379 48.5
Aa31LG3G17980 Aethionema arabicum HOM05D004199 ORTHO05D005905 6.4e-67 259.2 353 48.7
TPR.G37944 Trifolium pratense HOM05D004199 ORTHO05D005905 1.6e-65 254.6 306 57.2
ATR0665G261 Amborella trichopoda HOM05D004199 ORTHO05D005905 5.1e-64 249.6 373 46.6
BcaB08g37246 Brassica carinata HOM05D004199 ORTHO05D005905 8.1e-62 242.3 342 45.9
SEGI_39962 Sequoiadendron giganteum HOM05D004199 ORTHO05D005905 6.9e-61 239.2 363 46.6
AL6G19260 Arabidopsis lyrata HOM05D004199 ORTHO05D005905 1.2e-60 238.4 367 45.5
C09p68380 Brassica napus HOM05D004199 ORTHO05D005905 1.2e-60 238.4 359 44.8
Sp6g34340 Schrenkiella parvula HOM05D004199 ORTHO05D005905 1.5e-60 238.0 366 45.4
Cpa.g.sc221.8 Carica papaya HOM05D004199 ORTHO05D005905 3.4e-60 236.9 326 51.5
A10p28170 Brassica napus HOM05D004199 ORTHO05D005905 1.7e-59 234.6 347 45.8
BraA10t44866Z Brassica rapa HOM05D004199 ORTHO05D005905 1.7e-59 234.6 347 45.8
HPP92_022758 Vanilla planifolia HOM05D004199 ORTHO05D005905 1.1e-58 231.9 371 45.3
Nitab4.5_0011513g0020 Nicotiana tabacum HOM05D004199 ORTHO05D005905 1.9e-58 231.1 402 44.5
Duzib235G0865 Durio zibethinus HOM05D004199 ORTHO05D005905 3.2e-58 230.3 328 53.0
Thhalv10012615m.g Eutrema salsugineum HOM05D004199 ORTHO05D005905 3.2e-58 230.3 365 44.9
BolC9t59585H Brassica oleracea HOM05D004199 ORTHO05D005905 7.1e-58 229.2 360 43.6
BolC3t12974H Brassica oleracea HOM05D004199 ORTHO05D005905 1.2e-57 228.4 343 46.9
C03p04430 Brassica napus HOM05D004199 ORTHO05D005905 1.6e-57 228.0 343 46.9
BraA03t09739Z Brassica rapa HOM05D004199 ORTHO05D005905 2.7e-57 227.3 343 45.8
A03p03960 Brassica napus HOM05D004199 ORTHO05D005905 4.6e-57 226.5 342 45.3
Carub.0006s0751 Capsella rubella HOM05D004199 ORTHO05D005905 1.3e-56 224.9 364 44.2
AT5G08550 Arabidopsis thaliana HOM05D004199 ORTHO05D005905 1.5e-55 221.5 364 44.0
CARHR204430 Cardamine hirsuta HOM05D004199 ORTHO05D005905 4.8e-54 216.5 367 43.3
BcaB01g05585 Brassica carinata HOM05D004199 ORTHO05D005905 2.6e-52 210.7 374 43.0
Lalb_Chr04g0254951 Lupinus albus HOM05D004199 ORTHO05D005905 3.4e-52 210.3 373 44.2
Zm00001eb064800 Zea mays HOM05D004199 ORTHO05D005905 5.6e-47 193.0 415 36.4
AagrBONN_evm.TU.Sc2ySwM_228.4147 Anthoceros agrestis HOM05D004199 ORTHO05D005905 2.8e-46 190.7 386 39.4
Os03g0853700 Oryza sativa ssp. japonica HOM05D004199 ORTHO05D005905 1.7e-43 181.4 402 37.1
Pp3c5_20240 Physcomitrium patens HOM05D004199 ORTHO05D005905 1.8e-40 171.4 383 36.6
AagrBONN_evm.TU.Sc2ySwM_368.435 Anthoceros agrestis HOM05D004199 ORTHO05D005905 1.6e-38 164.9 386 37.3
Aqoxy6G00799 Aquilegia oxysepala HOM05D004199 ORTHO05D005905 5.3e-37 159.8 357 35.3
Actinidia38395 Actinidia chinensis HOM05D004199 ORTHO05D005905 5.7e-31 139.8 226 48.2
SMO259G0010 Selaginella moellendorffii HOM05D004199 ORTHO05D005905 1.6e-30 138.3 368 35.3
Mapoly0131s0026 Marchantia polymorpha HOM05D004199 ORTHO05D005905 2.9e-27 127.5 398 32.7
Rhsim01G0212500 Rhododendron simsii HOM05D004199 ORTHO05D005905 5.5e-26 123.2 110 63.6
Zm00001eb177730 Zea mays HOM05D004199 ORTHO05D005905 8.2e-22 109.4 213 37.1
Zm00001eb381810 Zea mays HOM05D004199 ORTHO05D005905 1.1e-21 109.0 212 35.4
Solyc05g009850.4 Solanum lycopersicum HOM05D004199 ORTHO05D005905 5.0e-19 100.1 134 50.7
Zm00001eb323900 Zea mays HOM05D004199 ORTHO05D005905 1.8e-08 65.1 236 28.4


User provided reference genes

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