Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p024955 Quercus lobata HOM05D001734 ORTHO05D020518 7.1e-71 270.4 128 100.0
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 1.4e-21 106.7 61 85.2
QL01p024072 Quercus lobata HOM05D001734 ORTHO05D020518 9.1e-18 94.0 60 78.3
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 3.8e-16 88.6 61 77.0
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 2.1e-14 82.8 61 72.1
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 3.0e-13 79.0 57 64.9
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 1.5e-12 76.6 62 66.1
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 2.6e-12 75.9 71 54.9
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 5.7e-12 74.7 57 61.4
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 5.7e-12 74.7 57 61.4
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 1.3e-11 73.6 99 42.4
Cpa.g.sc76.49 Carica papaya HOM05D001734 ORTHO05D003483 1.7e-11 73.2 61 63.9
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 2.2e-11 72.8 70 58.6
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 4.8e-11 71.6 57 57.9
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 1.4e-10 70.1 73 54.8
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 1.8e-10 69.7 61 59.0
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 1.8e-10 69.7 61 59.0
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 1.8e-10 69.7 59 57.6
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 4.1e-10 68.6 62 54.8
FAN05G4580 Fragaria x ananassa HOM05D001734 ORTHO05D003483 4.1e-10 68.6 62 54.8
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 4.1e-10 68.6 62 54.8
Sabra15G0101700 Salix brachista HOM05D001734 ORTHO05D003483 4.1e-10 68.6 59 55.9
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 7.0e-10 67.8 62 53.2
Hma1.2p1_0701F.1_g205860 Hydrangea macrophylla HOM05D001734 ORTHO05D003483 7.0e-10 67.8 64 54.7
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 2.7e-09 65.9 59 55.9
Lj9A448G32 Lonicera japonica HOM05D001734 ORTHO05D003483 3.5e-09 65.5 59 55.9
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 5.9e-09 64.7 59 54.2
Rhsim08G0172200 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.3e-08 63.5 61 55.7
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 1.7e-08 63.2 111 34.2
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 3.8e-08 62.0 61 50.8
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 5.0e-08 61.6 118 38.1
vmacro19388 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 6.5e-08 61.2 61 50.8
Lsat_1_v5_gn_6_39261 Lactuca sativa HOM05D001734 ORTHO05D020518 8.5e-08 60.8 59 57.6
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 1.1e-07 60.5 57 50.9
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 1.5e-07 60.1 60 51.7
CSS0012833 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 1.5e-07 60.1 114 36.8
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 1.5e-07 60.1 60 50.0
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 1.5e-07 60.1 61 49.2
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 1.9e-07 59.7 59 50.8
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 5.5e-07 58.2 54 53.7
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 5.5e-07 58.2 59 49.2
Rhsim08G0157900 Rhododendron simsii HOM05D001734 ORTHO05D003483 7.2e-07 57.8 61 50.8
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 9.4e-07 57.4 54 57.4
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 9.4e-07 57.4 54 51.9
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 1.2e-06 57.0 54 55.6
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 1.2e-06 57.0 59 47.5
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 2.1e-06 56.2 65 47.7
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 2.7e-06 55.8 53 52.8
QL07p004594 Quercus lobata HOM05D001734 ORTHO05D020518 2.7e-06 55.8 37 75.7
TPR.G6035 Trifolium pratense HOM05D001734 ORTHO05D003483 2.7e-06 55.8 60 48.3
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 4.7e-06 55.1 63 41.3
SHI17006 Sapria himalayana HOM05D001734 ORTHO05D020518 4.7e-06 55.1 60 46.7
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 6.1e-06 54.7 69 42.0
Peaxi162Scf00009g00112 Petunia axillaris HOM05D001734 ORTHO05D003483 6.1e-06 54.7 56 51.8
Cc04_g14140 Coffea canephora HOM05D001734 ORTHO05D003483 8.0e-06 54.3 56 53.6
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 8.0e-06 54.3 59 44.1


User provided reference genes

Program Settings