Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g064480 Pisum sativum HOM05D005410 ORTHO05D007394 2.0e-112 409.1 196 100.0
Psat7g064400 Pisum sativum HOM05D005410 ORTHO05D007394 2.7e-53 212.6 150 74.0
Medtr8g088420 Medicago truncatula HOM05D005410 ORTHO05D007394 3.2e-22 109.4 109 57.8
TPR.G6787 Trifolium pratense HOM05D005410 ORTHO05D007394 3.2e-22 109.4 109 58.7
Lalb_Chr12g0204581 Lupinus albus HOM05D005410 ORTHO05D007394 1.6e-21 107.1 98 62.2
Lj4g0005740 Lotus japonicus HOM05D005410 ORTHO05D007394 2.1e-21 106.7 109 55.0
arahy.Tifrunner.gnm1.ann1.63K8WX Arachis hypogaea HOM05D005410 ORTHO05D007394 1.8e-20 103.6 109 53.2
arahy.Tifrunner.gnm1.ann1.GYZC8Z Arachis hypogaea HOM05D005410 ORTHO05D007394 1.8e-20 103.6 109 54.1
Oeu060891.1 Olea europaea HOM05D005410 ORTHO05D007394 2.3e-20 103.2 109 52.3
CSS0020515 Camellia sinensis var. sinensis HOM05D005410 ORTHO05D007394 5.1e-20 102.1 97 59.8
Thecc.09G203200 Theobroma cacao HOM05D005410 ORTHO05D007394 6.7e-20 101.7 109 51.4
ClCG02G024420 Citrullus lanatus HOM05D005410 ORTHO05D007394 1.1e-19 100.9 109 53.2
CsaV3_4G017550 Cucumis sativus L. HOM05D005410 ORTHO05D007394 1.1e-19 100.9 109 53.2
Glyma.05G166800 Glycine max HOM05D005410 ORTHO05D007394 1.9e-19 100.1 96 55.2
Glyma.08G124900 Glycine max HOM05D005410 ORTHO05D007394 1.9e-19 100.1 96 55.2
Oeu023974.1 Olea europaea HOM05D005410 ORTHO05D007394 2.5e-19 99.8 109 51.4
Oeu023977.1 Olea europaea HOM05D005410 ORTHO05D007394 2.5e-19 99.8 109 51.4
Cfa009554 Carpinus fangiana HOM05D005410 ORTHO05D007394 3.3e-19 99.4 109 52.3
QL01p010651 Quercus lobata HOM05D005410 ORTHO05D007394 3.3e-19 99.4 109 51.4
TAR369G0462 Trochodendron aralioides HOM05D005410 ORTHO05D007394 3.3e-19 99.4 109 51.4
VMungo0251G1592 Vigna mungo HOM05D005410 ORTHO05D007394 3.3e-19 99.4 96 55.2
CiPaw.14G137400 Carya illinoinensis HOM05D005410 ORTHO05D007394 4.3e-19 99.0 109 52.3
Rhsim13G0233300 Rhododendron simsii HOM05D005410 ORTHO05D007394 4.3e-19 99.0 109 51.4
Dinv13479 Davidia involucrata HOM05D005410 ORTHO05D007394 5.7e-19 98.6 96 55.2
Sabra03G0165200 Salix brachista HOM05D005410 ORTHO05D007394 5.7e-19 98.6 93 58.1
ECA233G0964 Erigeron canadensis HOM05D005410 ORTHO05D007394 7.4e-19 98.2 109 51.4
Gohir.A04G090700 Gossypium hirsutum HOM05D005410 ORTHO05D007394 7.4e-19 98.2 109 50.5
Phvul.002G247200 Phaseolus vulgaris HOM05D005410 ORTHO05D007394 9.7e-19 97.8 96 54.2
Potri.003G222200 Populus trichocarpa HOM05D005410 ORTHO05D007394 9.7e-19 97.8 93 58.1
Prupe.6G002700 Prunus persica HOM05D005410 ORTHO05D007394 9.7e-19 97.8 98 58.2
COL.COLO4_07519 Corchorus olitorius HOM05D005410 ORTHO05D007394 1.6e-18 97.1 109 50.5
Gohir.D04G130700 Gossypium hirsutum HOM05D005410 ORTHO05D007394 1.6e-18 97.1 109 49.5
Gorai.012G114400 Gossypium raimondii HOM05D005410 ORTHO05D007394 1.6e-18 97.1 109 49.5
MD11G1002900 Malus domestica HOM05D005410 ORTHO05D007394 1.6e-18 97.1 96 57.3
Sed0021908 Sechium edule HOM05D005410 ORTHO05D007394 1.6e-18 97.1 109 52.3
Haze_22935 Corylus avellana HOM05D005410 ORTHO05D007394 2.2e-18 96.7 109 51.4
DCAR_023818 Daucus carota HOM05D005410 ORTHO05D007394 2.2e-18 96.7 109 53.2
SGA_v2.0_scaffold6G03314 Striga asiatica HOM05D005410 ORTHO05D007394 2.2e-18 96.7 109 50.5
Actinidia16239 Actinidia chinensis HOM05D005410 ORTHO05D007394 2.8e-18 96.3 98 55.1
BcaC08g44199 Brassica carinata HOM05D005410 ORTHO05D007394 2.8e-18 96.3 109 50.5
A05p17460 Brassica napus HOM05D005410 ORTHO05D007394 2.8e-18 96.3 109 50.5
C06p16070 Brassica napus HOM05D005410 ORTHO05D007394 2.8e-18 96.3 109 50.5
BolC6t36806H Brassica oleracea HOM05D005410 ORTHO05D007394 2.8e-18 96.3 109 50.5
BraA05t20641Z Brassica rapa HOM05D005410 ORTHO05D007394 2.8e-18 96.3 109 50.5
CiPaw.13G177700 Carya illinoinensis HOM05D005410 ORTHO05D007394 2.8e-18 96.3 109 49.5
Thhalv10011629m.g Eutrema salsugineum HOM05D005410 ORTHO05D007394 2.8e-18 96.3 109 50.5
FvH4_3g45781 Fragaria vesca HOM05D005410 ORTHO05D007394 2.8e-18 96.3 109 50.5
FAN11G0543 Fragaria x ananassa HOM05D005410 ORTHO05D007394 2.8e-18 96.3 109 50.5
FAN11G0605 Fragaria x ananassa HOM05D005410 ORTHO05D007394 2.8e-18 96.3 109 50.5
SGA_v2.0_scaffold3G01679 Striga asiatica HOM05D005410 ORTHO05D007394 2.8e-18 96.3 109 52.3
BcaB02g10821 Brassica carinata HOM05D005410 ORTHO05D007394 3.7e-18 95.9 109 49.5
CANSAT11G0129 Cannabis sativa HOM05D005410 ORTHO05D007394 3.7e-18 95.9 109 50.5
Nn2g15872 Nelumbo nucifera HOM05D005410 ORTHO05D007394 3.7e-18 95.9 110 50.0
AL1G63500 Arabidopsis lyrata HOM05D005410 ORTHO05D007394 4.8e-18 95.5 109 50.5
Cpa.g.sc119.36 Carica papaya HOM05D005410 ORTHO05D007394 4.8e-18 95.5 109 50.5
MD03G1003100 Malus domestica HOM05D005410 ORTHO05D007394 4.8e-18 95.5 96 57.3
vmacro17045 Vaccinium macrocarpon HOM05D005410 ORTHO05D007394 4.8e-18 95.5 98 55.1
RcHm_v2.0_Chr5g0083861 Rosa chinensis HOM05D005410 ORTHO05D007394 6.3e-18 95.1 109 51.4
AT1G55480 Arabidopsis thaliana HOM05D005410 ORTHO05D007394 8.2e-18 94.7 109 50.5
Duzib168G1987 Durio zibethinus HOM05D005410 ORTHO05D007394 8.2e-18 94.7 109 48.6
FAN25G1403 Fragaria x ananassa HOM05D005410 ORTHO05D007394 1.1e-17 94.4 109 49.5
HanXRQChr07g0186621 Helianthus annuus HOM05D005410 ORTHO05D007394 1.1e-17 94.4 98 56.1
TAR623G0245 Trochodendron aralioides HOM05D005410 ORTHO05D007394 1.1e-17 94.4 94 55.3
GSVIVG01025488001 Vitis vinifera HOM05D005410 ORTHO05D007394 1.1e-17 94.4 109 47.7
CARHR045150 Cardamine hirsuta HOM05D005410 ORTHO05D007394 1.4e-17 94.0 109 49.5
FAN16G2022 Fragaria x ananassa HOM05D005410 ORTHO05D007394 1.4e-17 94.0 109 49.5
Sp1g41090 Schrenkiella parvula HOM05D005410 ORTHO05D007394 1.4e-17 94.0 109 49.5
Carub.0001s4397 Capsella rubella HOM05D005410 ORTHO05D007394 2.4e-17 93.2 96 54.2
PGR102G1996 Punica granatum HOM05D005410 ORTHO05D007394 2.4e-17 93.2 109 48.6
Manes.15G110100 Manihot esculenta HOM05D005410 ORTHO05D007394 3.1e-17 92.8 109 47.7
Lj1A521T33 Lonicera japonica HOM05D005410 ORTHO05D007394 4.1e-17 92.4 96 55.2
Lj1A522T64 Lonicera japonica HOM05D005410 ORTHO05D007394 4.1e-17 92.4 96 55.2
SalBow3G3111 Salvia bowleyana HOM05D005410 ORTHO05D007394 4.1e-17 92.4 109 47.7
Hund13622 Selenicereus undatus HOM05D005410 ORTHO05D007394 5.3e-17 92.0 109 46.8
Eucgr.J01758 Eucalyptus grandis HOM05D005410 ORTHO05D007394 6.9e-17 91.7 109 49.5
PSO339G0242 Papaver somniferum HOM05D005410 ORTHO05D007394 6.9e-17 91.7 109 49.5
PSO384G0864 Papaver somniferum HOM05D005410 ORTHO05D007394 6.9e-17 91.7 109 49.5
vmacro04262 Vaccinium macrocarpon HOM05D005410 ORTHO05D007394 6.9e-17 91.7 109 48.6
vmacro23200 Vaccinium macrocarpon HOM05D005410 ORTHO05D007394 6.9e-17 91.7 109 48.6
Atru.chr3.2102 Acer truncatum HOM05D005410 ORTHO05D007394 1.2e-16 90.9 98 54.1
Atru.chr3.2395 Acer truncatum HOM05D005410 ORTHO05D007394 1.2e-16 90.9 98 54.1
CAN.G1834.14 Capsicum annuum HOM05D005410 ORTHO05D007394 1.2e-16 90.9 109 49.5
PGSC0003DMG400032122 Solanum tuberosum HOM05D005410 ORTHO05D007394 1.2e-16 90.9 109 49.5
HPP92_001905 Vanilla planifolia HOM05D005410 ORTHO05D007394 1.2e-16 90.9 92 53.3
Nitab4.5_0000551g0050 Nicotiana tabacum HOM05D005410 ORTHO05D007394 2.0e-16 90.1 109 48.6
Nitab4.5_0006195g0040 Nicotiana tabacum HOM05D005410 ORTHO05D007394 2.0e-16 90.1 109 48.6
Sopen01g001540 Solanum pennellii HOM05D005410 ORTHO05D007394 2.0e-16 90.1 109 48.6
ATR0697G079 Amborella trichopoda HOM05D005410 ORTHO05D007394 3.4e-16 89.4 92 53.3
Migut.N00542 Erythranthe guttata HOM05D005410 ORTHO05D007394 3.4e-16 89.4 109 48.6
EL10Ac4g10389 Beta vulgaris HOM05D005410 ORTHO05D007394 4.5e-16 89.0 109 46.8
Cc01_g00190 Coffea canephora HOM05D005410 ORTHO05D007394 4.5e-16 89.0 93 52.7
MBI05_g04454_MAGBIO Magnolia biondii HOM05D005410 ORTHO05D007394 4.5e-16 89.0 98 53.1
THA.LOC104810318 Tarenaya hassleriana HOM05D005410 ORTHO05D007394 4.5e-16 89.0 109 45.9
Aa31LG10G770 Aethionema arabicum HOM05D005410 ORTHO05D007394 7.7e-16 88.2 109 46.8
Ciclev10015873m.g Citrus clementina HOM05D005410 ORTHO05D007394 1.0e-15 87.8 109 46.8
Lsat_1_v5_gn_6_55740 Lactuca sativa HOM05D005410 ORTHO05D007394 1.7e-15 87.0 109 46.8
Peaxi162Scf00036g00221 Petunia axillaris HOM05D005410 ORTHO05D007394 1.7e-15 87.0 109 47.7
Aqoxy1G00490 Aquilegia oxysepala HOM05D005410 ORTHO05D007394 2.2e-15 86.7 109 48.6
CDE10G1105 Ceratophyllum demersum HOM05D005410 ORTHO05D007394 2.2e-15 86.7 90 53.3
Sc09g0000010 Simmondsia chinensis HOM05D005410 ORTHO05D007394 2.2e-15 86.7 98 50.0
Zm00001eb300990 Zea mays HOM05D005410 ORTHO05D007394 2.2e-15 86.7 109 47.7
MSTRG.12800 Avicennia marina HOM05D005410 ORTHO05D007394 3.8e-15 85.9 108 47.2
Psat7g062240 Pisum sativum HOM05D005410 ORTHO05D007394 3.8e-15 85.9 43 93.0
AUR62005847 Chenopodium quinoa HOM05D005410 ORTHO05D007394 5.0e-15 85.5 93 51.6
Os07g0171100 Oryza sativa ssp. japonica HOM05D005410 ORTHO05D007394 8.5e-15 84.7 109 44.0
AUR62032839 Chenopodium quinoa HOM05D005410 ORTHO05D007394 1.9e-14 83.6 93 50.5
SEGI_35670 Sequoiadendron giganteum HOM05D005410 ORTHO05D007394 5.5e-14 82.0 89 51.7
unitig_0.g1148 Utricularia gibba HOM05D005410 ORTHO05D007394 1.2e-13 80.9 93 50.5
TAR626G1406 Trochodendron aralioides HOM05D004228 ORTHO05D005137 2.8e-10 69.7 41 75.6
Pp3c19_15590 Physcomitrium patens HOM05D005410 ORTHO05D007394 4.8e-10 68.9 43 76.7
Potri.001G002700 Populus trichocarpa HOM05D005410 ORTHO05D007394 6.3e-10 68.6 78 51.3
Ciclev10018072m.g Citrus clementina HOM05D005410 ORTHO05D007394 8.2e-10 68.2 38 81.6
Mapoly0020s0152 Marchantia polymorpha HOM05D005410 ORTHO05D007394 4.1e-09 65.9 43 69.8
SMO238G0020 Selaginella moellendorffii HOM05D005410 ORTHO05D007394 5.3e-09 65.5 43 69.8
SMO329G0030 Selaginella moellendorffii HOM05D005410 ORTHO05D007394 5.3e-09 65.5 43 69.8
CBR_g66797 Chara braunii HOM05D005410 ORTHO05D007394 1.5e-08 63.9 63 52.4
Pp3c22_13930 Physcomitrium patens HOM05D005410 ORTHO05D007394 3.4e-08 62.8 68 52.9
CDE10G0059 Ceratophyllum demersum HOM05D005410 ORTHO05D007394 6.5e-07 58.5 107 41.1
C06p10410 Brassica napus HOM05D005410 ORTHO05D040422 8.5e-07 58.2 32 81.2
BolC6t36118H Brassica oleracea HOM05D005410 ORTHO05D040422 8.5e-07 58.2 32 81.2


User provided reference genes

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