Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat7g041920 Pisum sativum HOM05D004007 ORTHO05D005127 2.2e-85 318.9 160 100.0
Psat6g062440 Pisum sativum HOM05D004007 ORTHO05D005127 1.0e-74 283.5 147 97.3
TPR.G5690 Trifolium pratense HOM05D004007 ORTHO05D005127 2.9e-74 282.0 147 95.2
Medtr1g069645 Medicago truncatula HOM05D004007 ORTHO05D005127 1.5e-73 279.6 147 94.6
Lj5g0009759 Lotus japonicus HOM05D004007 ORTHO05D005127 9.5e-73 276.9 147 93.2
Ca_09660_v3 Cicer arietinum L. HOM05D004007 ORTHO05D005127 3.6e-72 275.0 147 92.5
Phvul.007G190800 Phaseolus vulgaris HOM05D004007 ORTHO05D005127 5.8e-70 267.7 147 90.5
TAR636G3081 Trochodendron aralioides HOM05D004007 ORTHO05D005127 5.8e-70 267.7 147 89.8
Glyma.13G125400 Glycine max HOM05D004007 ORTHO05D005127 7.5e-70 267.3 147 91.2
Lalb_Chr06g0170611 Lupinus albus HOM05D004007 ORTHO05D005127 7.5e-70 267.3 147 89.8
Actinidia25803 Actinidia chinensis HOM05D004007 ORTHO05D005127 1.7e-69 266.2 147 89.8
Actinidia09529 Actinidia chinensis HOM05D004007 ORTHO05D005127 2.2e-69 265.8 147 89.1
Lalb_Chr02g0152651 Lupinus albus HOM05D004007 ORTHO05D005127 2.2e-69 265.8 147 89.8
Dinv16374 Davidia involucrata HOM05D004007 ORTHO05D005127 3.7e-69 265.0 147 87.8
Glyma.10G039000 Glycine max HOM05D004007 ORTHO05D005127 4.9e-69 264.6 147 90.5
vmacro02694 Vaccinium macrocarpon HOM05D004007 ORTHO05D005127 4.9e-69 264.6 147 87.8
Duzib138G0603 Durio zibethinus HOM05D004007 ORTHO05D005127 8.3e-69 263.8 147 88.4
Sed0019801 Sechium edule HOM05D004007 ORTHO05D005127 8.3e-69 263.8 147 86.4
VMungo0720G0501 Vigna mungo HOM05D004007 ORTHO05D005127 8.3e-69 263.8 147 89.8
GSVIVG01028373001 Vitis vinifera HOM05D004007 ORTHO05D005127 8.3e-69 263.8 147 87.8
Gorai.001G179900 Gossypium raimondii HOM05D004007 ORTHO05D005127 1.1e-68 263.5 147 88.4
Lalb_Chr21g0314021 Lupinus albus HOM05D004007 ORTHO05D005127 1.1e-68 263.5 147 89.1
COL.COLO4_34373 Corchorus olitorius HOM05D004007 ORTHO05D005127 1.4e-68 263.1 147 87.1
Rhsim01G0261700 Rhododendron simsii HOM05D004007 ORTHO05D005127 1.4e-68 263.1 147 87.1
CANSAT01G1551 Cannabis sativa HOM05D004007 ORTHO05D005127 1.9e-68 262.7 147 88.4
CsaV3_6G007490 Cucumis sativus L. HOM05D004007 ORTHO05D005127 4.1e-68 261.5 147 87.1
Nn1g02862 Nelumbo nucifera HOM05D004007 ORTHO05D005127 4.1e-68 261.5 147 88.4
Nn3g19723 Nelumbo nucifera HOM05D004007 ORTHO05D005127 4.1e-68 261.5 147 88.4
MELO3C022382.2 Cucumis melo HOM05D004007 ORTHO05D005127 5.4e-68 261.2 147 86.4
Gohir.D07G156900 Gossypium hirsutum HOM05D004007 ORTHO05D005127 5.4e-68 261.2 147 87.8
Gohir.D07G157000 Gossypium hirsutum HOM05D004007 ORTHO05D005127 5.4e-68 261.2 147 87.8
Gohir.A07G150500 Gossypium hirsutum HOM05D004007 ORTHO05D005127 7.0e-68 260.8 147 87.1
Prupe.8G219400 Prunus persica HOM05D004007 ORTHO05D005127 7.0e-68 260.8 147 87.8
CSS0014309 Camellia sinensis var. sinensis HOM05D004007 ORTHO05D005127 1.2e-67 260.0 147 87.8
CiPaw.03G267900 Carya illinoinensis HOM05D004007 ORTHO05D005127 2.0e-67 259.2 147 87.1
Duzib211G0126 Durio zibethinus HOM05D004007 ORTHO05D005127 2.0e-67 259.2 147 86.4
Rhsim13G0038000 Rhododendron simsii HOM05D004007 ORTHO05D005127 2.7e-67 258.8 151 85.4
CiPaw.04G188500 Carya illinoinensis HOM05D004007 ORTHO05D005127 3.5e-67 258.5 147 86.4
Dinv34652 Davidia involucrata HOM05D004007 ORTHO05D005127 3.5e-67 258.5 147 86.4
Gorai.001G180000 Gossypium raimondii HOM05D004007 ORTHO05D005127 3.5e-67 258.5 147 87.1
ClCG06G001530 Citrullus lanatus HOM05D004007 ORTHO05D005127 4.6e-67 258.1 147 85.0
Sc16g0004880 Simmondsia chinensis HOM05D004007 ORTHO05D005127 4.6e-67 258.1 147 85.0
Thecc.01G253900 Theobroma cacao HOM05D004007 ORTHO05D005127 4.6e-67 258.1 147 86.4
Manes.13G037000 Manihot esculenta HOM05D004007 ORTHO05D005127 6.0e-67 257.7 147 85.7
QL09p040238 Quercus lobata HOM05D004007 ORTHO05D005127 6.0e-67 257.7 147 87.8
Atru.chr5.1778 Acer truncatum HOM05D004007 ORTHO05D005127 7.8e-67 257.3 147 85.7
Gohir.A07G150600 Gossypium hirsutum HOM05D004007 ORTHO05D005127 7.8e-67 257.3 147 86.4
Os02g0621700 Oryza sativa ssp. japonica HOM05D004007 ORTHO05D005127 7.8e-67 257.3 147 85.7
Ciclev10020300m.g Citrus clementina HOM05D004007 ORTHO05D005127 1.0e-66 256.9 147 86.4
FvH4_2g20990 Fragaria vesca HOM05D004007 ORTHO05D005127 1.0e-66 256.9 147 87.1
FAN15G2391 Fragaria x ananassa HOM05D004007 ORTHO05D005127 1.0e-66 256.9 147 87.1
MBI07_g31081_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 1.0e-66 256.9 147 86.4
Potri.002G259600 Populus trichocarpa HOM05D004007 ORTHO05D005127 1.0e-66 256.9 147 86.4
MBI10_g27626_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 1.3e-66 256.5 147 85.0
HPP92_008549 Vanilla planifolia HOM05D004007 ORTHO05D005127 1.3e-66 256.5 147 85.7
ATR0736G150 Amborella trichopoda HOM05D004007 ORTHO05D005127 1.7e-66 256.1 147 86.4
CAN.G771.36 Capsicum annuum HOM05D004007 ORTHO05D005127 1.7e-66 256.1 147 83.7
MD05G1193100 Malus domestica HOM05D004007 ORTHO05D005127 2.3e-66 255.8 147 85.7
MD10G1179600 Malus domestica HOM05D004007 ORTHO05D005127 2.3e-66 255.8 147 85.7
Aqoxy2G03706 Aquilegia oxysepala HOM05D004007 ORTHO05D005127 3.0e-66 255.4 147 84.4
Lj1A71T65 Lonicera japonica HOM05D004007 ORTHO05D005127 3.9e-66 255.0 147 85.0
Potri.014G195700 Populus trichocarpa HOM05D004007 ORTHO05D005127 3.9e-66 255.0 147 85.7
RcHm_v2.0_Chr6g0287371 Rosa chinensis HOM05D004007 ORTHO05D005127 3.9e-66 255.0 147 87.1
Lsat_1_v5_gn_8_92300 Lactuca sativa HOM05D004007 ORTHO05D005127 5.0e-66 254.6 147 85.0
Lsat_1_v5_gn_9_10741 Lactuca sativa HOM05D004007 ORTHO05D005127 5.0e-66 254.6 147 85.0
PGR031G0590 Punica granatum HOM05D004007 ORTHO05D005127 5.0e-66 254.6 147 85.0
PGSC0003DMG400020149 Solanum tuberosum HOM05D004007 ORTHO05D005127 6.6e-66 254.2 147 83.7
Solyc06g083790.3 Solanum lycopersicum HOM05D004007 ORTHO05D005127 8.6e-66 253.8 147 83.7
Sopen06g035200 Solanum pennellii HOM05D004007 ORTHO05D005127 8.6e-66 253.8 147 83.7
Aa31LG8G17390 Aethionema arabicum HOM05D004007 ORTHO05D005127 1.1e-65 253.4 147 83.7
Sabra02G0197500 Salix brachista HOM05D004007 ORTHO05D005127 1.1e-65 253.4 147 84.4
Zm00001eb185030 Zea mays HOM05D004007 ORTHO05D005127 1.1e-65 253.4 147 85.7
BcaB07g31587 Brassica carinata HOM05D004007 ORTHO05D005127 1.5e-65 253.1 147 84.4
DCAR_018503 Daucus carota HOM05D004007 ORTHO05D005127 1.5e-65 253.1 147 82.3
THA.LOC104820071 Tarenaya hassleriana HOM05D004007 ORTHO05D005127 1.5e-65 253.1 147 84.4
Carub.0003s3481 Capsella rubella HOM05D004007 ORTHO05D005127 1.9e-65 252.7 147 83.7
HanXRQChr04g0111281 Helianthus annuus HOM05D004007 ORTHO05D005127 1.9e-65 252.7 147 84.4
Manes.12G034800 Manihot esculenta HOM05D004007 ORTHO05D005127 1.9e-65 252.7 147 83.7
BcaB08g34906 Brassica carinata HOM05D004007 ORTHO05D005127 2.5e-65 252.3 147 83.0
Cc01_g18040 Coffea canephora HOM05D004007 ORTHO05D005127 2.5e-65 252.3 147 84.4
Hma1.2p1_0273F.1_g109400 Hydrangea macrophylla HOM05D004007 ORTHO05D005127 2.5e-65 252.3 147 83.7
Peaxi162Scf00415g00213 Petunia axillaris HOM05D004007 ORTHO05D005127 2.5e-65 252.3 147 83.7
Oeu035732.1 Olea europaea HOM05D004007 ORTHO05D005127 3.3e-65 251.9 147 84.4
AL3G53400 Arabidopsis lyrata HOM05D004007 ORTHO05D005127 4.3e-65 251.5 147 83.0
AT2G20420 Arabidopsis thaliana HOM05D004007 ORTHO05D005127 4.3e-65 251.5 147 83.0
BcaC04g22683 Brassica carinata HOM05D004007 ORTHO05D005127 4.3e-65 251.5 147 83.0
A09p13930 Brassica napus HOM05D004007 ORTHO05D005127 4.3e-65 251.5 147 83.0
C09p16710 Brassica napus HOM05D004007 ORTHO05D005127 4.3e-65 251.5 147 83.0
BolC9t54570H Brassica oleracea HOM05D004007 ORTHO05D005127 4.3e-65 251.5 147 83.0
BraA09t37039Z Brassica rapa HOM05D004007 ORTHO05D005127 4.3e-65 251.5 147 83.0
CARHR110970 Cardamine hirsuta HOM05D004007 ORTHO05D005127 4.3e-65 251.5 147 83.0
Sp3g33640 Schrenkiella parvula HOM05D004007 ORTHO05D005127 4.3e-65 251.5 147 83.7
Zm00001eb247500 Zea mays HOM05D004007 ORTHO05D005127 4.3e-65 251.5 147 83.7
BcaB03g16833 Brassica carinata HOM05D004007 ORTHO05D005127 7.3e-65 250.8 147 83.0
Haze_24666 Corylus avellana HOM05D004007 ORTHO05D005127 7.3e-65 250.8 147 83.7
Haze_24671 Corylus avellana HOM05D004007 ORTHO05D005127 7.3e-65 250.8 147 83.7
Thhalv10001996m.g Eutrema salsugineum HOM05D004007 ORTHO05D005127 7.3e-65 250.8 147 83.0
C07p00650 Brassica napus HOM05D004007 ORTHO05D005127 9.5e-65 250.4 147 82.3
BraA07t27822Z Brassica rapa HOM05D004007 ORTHO05D005127 9.5e-65 250.4 147 82.3
THA.LOC104804042 Tarenaya hassleriana HOM05D004007 ORTHO05D005127 9.5e-65 250.4 147 83.0
TWI12G1332 Tripterygium wilfordii HOM05D004007 ORTHO05D005127 9.5e-65 250.4 147 81.6
TWI18G0319 Tripterygium wilfordii HOM05D004007 ORTHO05D005127 9.5e-65 250.4 147 83.7
HanXRQChr10g0280751 Helianthus annuus HOM05D004007 ORTHO05D005127 1.2e-64 250.0 147 82.3
Nitab4.5_0003295g0070 Nicotiana tabacum HOM05D004007 ORTHO05D005127 1.6e-64 249.6 147 82.3
Sabra14G0145900 Salix brachista HOM05D004007 ORTHO05D005127 1.6e-64 249.6 147 83.7
arahy.Tifrunner.gnm1.ann1.ZVPG3A Arachis hypogaea HOM05D004007 ORTHO05D005127 2.1e-64 249.2 147 82.3
PSO210G2341 Papaver somniferum HOM05D004007 ORTHO05D005127 2.1e-64 249.2 147 83.0
PSO832G3765 Papaver somniferum HOM05D004007 ORTHO05D005127 2.1e-64 249.2 147 83.0
Peaxi162Scf00013g01239 Petunia axillaris HOM05D004007 ORTHO05D005127 2.1e-64 249.2 144 84.0
MSTRG.18338 Avicennia marina HOM05D004007 ORTHO05D005127 2.8e-64 248.8 147 83.7
Migut.D00454 Erythranthe guttata HOM05D004007 ORTHO05D005127 2.8e-64 248.8 147 83.7
MSTRG.21476 Avicennia marina HOM05D004007 ORTHO05D005127 3.6e-64 248.4 147 83.7
CDE05G0056 Ceratophyllum demersum HOM05D004007 ORTHO05D005127 3.6e-64 248.4 147 82.3
Migut.N02218 Erythranthe guttata HOM05D004007 ORTHO05D005127 6.2e-64 247.7 147 81.6
Eucgr.H00143 Eucalyptus grandis HOM05D004007 ORTHO05D005127 8.0e-64 247.3 147 81.0
SEGI_32315 Sequoiadendron giganteum HOM05D004007 ORTHO05D005127 8.0e-64 247.3 147 79.6
EL10Ac6g15333 Beta vulgaris HOM05D004007 ORTHO05D005127 1.1e-63 246.9 147 82.3
CDE02G1941 Ceratophyllum demersum HOM05D004007 ORTHO05D005127 1.1e-63 246.9 147 82.3
FAN24G2352 Fragaria x ananassa HOM05D004007 ORTHO05D005127 1.1e-63 246.9 162 79.0
A07p00310 Brassica napus HOM05D004007 ORTHO05D005127 1.4e-63 246.5 147 81.0
Nitab4.5_0000917g0090 Nicotiana tabacum HOM05D004007 ORTHO05D005127 1.4e-63 246.5 164 76.2
SalBow6G2566 Salvia bowleyana HOM05D004007 ORTHO05D005127 1.4e-63 246.5 147 82.3
BcaC06g36729 Brassica carinata HOM05D004007 ORTHO05D005127 1.8e-63 246.1 147 81.0
BolC7t40509H Brassica oleracea HOM05D004007 ORTHO05D005127 1.8e-63 246.1 147 81.0
unitig_22.g5450 Utricularia gibba HOM05D004007 ORTHO05D005127 5.2e-63 244.6 147 83.0
AUR62003546 Chenopodium quinoa HOM05D004007 ORTHO05D005127 6.8e-63 244.2 147 81.0
AUR62017860 Chenopodium quinoa HOM05D004007 ORTHO05D005127 6.8e-63 244.2 147 81.0
Hund04389 Selenicereus undatus HOM05D004007 ORTHO05D005127 8.9e-63 243.8 147 80.3
SGA_v2.0_scaffold138G35202 Striga asiatica HOM05D004007 ORTHO05D005127 8.9e-63 243.8 147 82.3
FAN27G2583 Fragaria x ananassa HOM05D004007 ORTHO05D005127 7.5e-62 240.7 156 80.8
FAN20G1240 Fragaria x ananassa HOM05D004007 ORTHO05D005127 3.7e-61 238.4 162 77.8
Mapoly0005s0186 Marchantia polymorpha HOM05D004007 ORTHO05D005127 7.3e-57 224.2 147 74.1
Cpa.g.sc165.35 Carica papaya HOM05D004007 ORTHO05D005127 1.2e-56 223.4 127 85.8
SMO201G0240 Selaginella moellendorffii HOM05D004007 ORTHO05D005127 2.8e-56 222.2 147 72.8
MBI07_g32831_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 1.4e-55 219.9 147 77.6
arahy.Tifrunner.gnm1.ann1.TE5CG8 Arachis hypogaea HOM05D004007 ORTHO05D005127 8.9e-55 217.2 126 82.5
SalBow4G2771 Salvia bowleyana HOM05D004007 ORTHO05D005127 7.5e-54 214.2 152 73.7
MBI10_g27857_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 4.9e-53 211.5 147 73.5
TAR365G0842 Trochodendron aralioides HOM05D004007 ORTHO05D005127 1.2e-51 206.8 115 87.8
Pp3c20_5640 Physcomitrium patens HOM05D004007 ORTHO05D005127 2.1e-51 206.1 147 64.6
CBR_g26489 Chara braunii HOM05D004007 ORTHO05D005127 7.8e-51 204.1 147 64.6
Nitab4.5_0001919g0010 Nicotiana tabacum HOM05D004007 ORTHO05D005127 1.5e-49 199.9 147 71.4
QL09p040223 Quercus lobata HOM05D004007 ORTHO05D005127 8.1e-48 194.1 147 70.7
ECA236G0129 Erigeron canadensis HOM05D004007 ORTHO05D005127 1.3e-45 186.8 115 80.9
Psat3g074720 Pisum sativum HOM05D004007 ORTHO05D005127 3.8e-45 185.3 147 70.7
PRCOL_00006943 Prasinoderma coloniale HOM05D004007 ORTHO05D005127 4.2e-44 181.8 147 59.2
Cre17.g703700 Chlamydomonas reinhardtii HOM05D004007 ORTHO05D005127 3.3e-41 172.2 147 57.1
vmacro14809 Vaccinium macrocarpon HOM05D004007 ORTHO05D005127 5.6e-41 171.4 219 47.9
MCO01G516 Micromonas commoda HOM05D004007 ORTHO05D005127 2.1e-40 169.5 148 56.1
Ah.03g147720 Amaranthus hybridus HOM05D004007 ORTHO05D005127 1.9e-36 156.4 101 73.3
Oeu055792.1 Olea europaea HOM05D004007 ORTHO05D005127 3.3e-33 145.6 147 56.5
Sed0026875 Sechium edule HOM05D004007 ORTHO05D005127 3.3e-33 145.6 145 55.2
MBI10_g13790_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 6.4e-29 131.3 77 83.1
Haze_27401 Corylus avellana HOM05D004007 ORTHO05D005127 2.5e-17 92.8 132 41.7
Zm00001eb283930 Zea mays HOM05D004007 ORTHO05D005127 2.1e-16 89.7 47 87.2
Haze_26746 Corylus avellana HOM05D004007 ORTHO05D005127 1.1e-12 77.4 92 39.1
Lj2A1145G31 Lonicera japonica HOM05D004007 ORTHO05D005127 9.3e-12 74.3 56 67.9
Glyma.18G157500 Glycine max HOM05D004007 ORTHO05D005127 5.1e-10 68.6 37 86.5


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