Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g292000 Pisum sativum HOM05D009122 ORTHO05D012377 2.6e-180 635.2 305 100.0
Psat1g139400 Pisum sativum HOM05D009122 ORTHO05D012377 3.7e-33 146.4 179 41.3
Psat6g069840 Pisum sativum HOM05D000003 ORTHO05D011085 1.5e-26 124.4 230 32.2
Psat1g167240 Pisum sativum HOM05D000003 ORTHO05D000022 1.7e-25 120.9 159 41.5
Psat4g049280 Pisum sativum HOM05D009122 ORTHO05D011085 1.1e-24 118.2 154 36.4
Psat1g152760 Pisum sativum HOM05D032678 ORTHO05D011085 9.1e-24 115.2 257 29.6
Psat0s3507g0120 Pisum sativum HOM05D000003 ORTHO05D000004 2.6e-23 113.6 151 42.4
Psat5g132920 Pisum sativum HOM05D009122 ORTHO05D012377 3.5e-23 113.2 174 35.6
Sabra09G0015300 Salix brachista HOM05D000003 ORTHO05D000006 3.7e-17 93.2 324 22.2
Sabra08G0134900 Salix brachista HOM05D000003 ORTHO05D000006 5.3e-16 89.4 299 24.7
THA.LOC104799794 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 7.0e-16 89.0 196 28.6
Manes.12G129601 Manihot esculenta HOM05D000003 ORTHO05D011148 7.7e-15 85.5 167 26.3
Psat7g241280 Pisum sativum HOM05D000003 ORTHO05D000004 5.0e-14 82.8 109 31.2
Psat6g031080 Pisum sativum HOM05D009122 ORTHO05D011085 1.5e-13 81.3 129 28.7
Psat4g035320 Pisum sativum HOM05D000894 ORTHO05D001833 2.5e-13 80.5 260 25.4
TPR.G35808 Trifolium pratense HOM05D009122 ORTHO05D011085 4.2e-13 79.7 100 36.0
Psat4g223800 Pisum sativum HOM05D015141 ORTHO05D012377 7.2e-13 79.0 130 30.8
Psat7g059240 Pisum sativum HOM05D000003 ORTHO05D000022 9.4e-13 78.6 168 26.2
Atru.chr3.2067 Acer truncatum HOM05D000003 ORTHO05D000022 1.6e-12 77.8 193 25.4
RcHm_v2.0_Chr5g0053531 Rosa chinensis HOM05D000003 ORTHO05D000004 1.6e-12 77.8 153 30.1
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-12 77.0 148 31.1
Psat7g032160 Pisum sativum HOM05D009122 ORTHO05D011085 2.7e-12 77.0 291 24.1
TPR.G39281 Trifolium pratense HOM05D009122 ORTHO05D011085 2.7e-12 77.0 100 35.0
Atru.chr2.971 Acer truncatum HOM05D000003 ORTHO05D000022 3.6e-12 76.6 343 23.3
Atru.chr6.1397 Acer truncatum HOM05D000003 ORTHO05D000022 4.7e-12 76.3 148 29.7
TPR.G1544 Trifolium pratense HOM05D000563 ORTHO05D000536 6.1e-12 75.9 243 22.6
RcHm_v2.0_Chr1g0351011 Rosa chinensis HOM05D000003 ORTHO05D000004 8.0e-12 75.5 196 27.0
Atru.chr4.29 Acer truncatum HOM05D000003 ORTHO05D000022 1.4e-11 74.7 190 27.4
Sabra04G0049100 Salix brachista HOM05D000003 ORTHO05D000007 1.4e-11 74.7 149 28.9
CSS0014297 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.8e-11 74.3 324 21.3
Psat0s2399g0080 Pisum sativum HOM05D000003 ORTHO05D037359 1.8e-11 74.3 95 34.7
RcHm_v2.0_Chr4g0406871 Rosa chinensis HOM05D000003 ORTHO05D000004 1.8e-11 74.3 144 28.5
Psat3g113680 Pisum sativum HOM05D009122 ORTHO05D011085 2.3e-11 73.9 106 32.1
COL.COLO4_30280 Corchorus olitorius HOM05D000155 ORTHO05D000022 4.0e-11 73.2 147 31.3
TPR.G3646 Trifolium pratense HOM05D040704 ORTHO05D012377 5.2e-11 72.8 124 29.8
Psat3g207120 Pisum sativum HOM05D000003 ORTHO05D000022 8.8e-11 72.0 131 31.3
Sabra07G0074300 Salix brachista HOM05D000609 ORTHO05D000462 8.8e-11 72.0 141 29.1
TWI38G0333 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 8.8e-11 72.0 151 27.8
Manes.13G092620 Manihot esculenta HOM05D000003 ORTHO05D000004 1.2e-10 71.6 144 27.8
Psat2g169680 Pisum sativum HOM05D009122 ORTHO05D011085 1.2e-10 71.6 72 41.7
TWI81G0242 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.2e-10 71.6 123 32.5
COL.COLO4_01156 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.5e-10 71.2 139 28.1
Psat6g017960 Pisum sativum HOM05D000003 ORTHO05D000022 1.5e-10 71.2 184 25.5
Psat7g047000 Pisum sativum HOM05D000003 ORTHO05D000022 2.0e-10 70.9 104 38.5
Sabra16G0000700 Salix brachista HOM05D060723 ORTHO05D000022 2.0e-10 70.9 147 27.2
Atru.chr11.757 Acer truncatum HOM05D000003 ORTHO05D000004 3.4e-10 70.1 150 28.0
TPR.G18181 Trifolium pratense HOM05D002880 ORTHO05D003450 3.4e-10 70.1 122 28.7
Atru.chr4.136 Acer truncatum HOM05D000003 ORTHO05D000022 5.7e-10 69.3 154 27.3
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 5.7e-10 69.3 136 30.1
QL04p047149 Quercus lobata HOM05D000003 ORTHO05D000022 7.5e-10 68.9 116 32.8
RcHm_v2.0_Chr1g0382551 Rosa chinensis HOM05D000003 ORTHO05D000004 7.5e-10 68.9 153 24.2
TPR.G15474 Trifolium pratense HOM05D009122 ORTHO05D012377 7.5e-10 68.9 96 33.3
Atru.chr3.3019 Acer truncatum HOM05D000003 ORTHO05D000022 9.8e-10 68.6 147 26.5
arahy.Tifrunner.gnm1.ann1.I6PHI5 Arachis hypogaea HOM05D000003 ORTHO05D000022 9.8e-10 68.6 134 27.6
FvH4_6g46881 Fragaria vesca HOM05D000003 ORTHO05D000022 9.8e-10 68.6 148 29.7
RcHm_v2.0_Chr2g0128961 Rosa chinensis HOM05D000003 ORTHO05D000022 9.8e-10 68.6 158 25.9
FvH4_3g27901 Fragaria vesca HOM05D000003 ORTHO05D000022 1.3e-09 68.2 169 26.6
TPR.G27521 Trifolium pratense HOM05D000003 ORTHO05D000022 1.3e-09 68.2 120 34.2
arahy.Tifrunner.gnm1.ann1.XW6Y6R Arachis hypogaea HOM05D000003 ORTHO05D000022 1.7e-09 67.8 114 28.1
FvH4_3g33091 Fragaria vesca HOM05D000003 ORTHO05D000022 2.2e-09 67.4 111 34.2
Psat2g019800 Pisum sativum HOM05D032678 ORTHO05D000022 2.2e-09 67.4 239 21.3
Psat2g050880 Pisum sativum HOM05D009122 ORTHO05D011085 2.8e-09 67.0 73 37.0
Psat2g135240 Pisum sativum HOM05D009122 ORTHO05D011085 2.8e-09 67.0 120 31.7
RcHm_v2.0_Chr1g0384551 Rosa chinensis HOM05D000003 ORTHO05D000004 2.8e-09 67.0 142 24.6
vmacro01816 Vaccinium macrocarpon HOM05D000489 ORTHO05D000372 2.8e-09 67.0 145 31.7
Atru.chr2.1761 Acer truncatum HOM05D000003 ORTHO05D000004 3.7e-09 66.6 147 27.2
Atru.chr4.1025 Acer truncatum HOM05D000003 ORTHO05D000004 3.7e-09 66.6 147 27.2
Atru.chr6.2848 Acer truncatum HOM05D000003 ORTHO05D000022 4.8e-09 66.2 149 27.5
CSS0029354 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.8e-09 66.2 246 22.8
CSS0039165 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.3e-09 65.9 245 22.0
SGA_v2.0_scaffold232G43526 Striga asiatica HOM05D015157 ORTHO05D011148 6.3e-09 65.9 165 24.2
CSS0047834 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.3e-09 65.5 285 21.4
TPR.G12894 Trifolium pratense HOM05D000003 ORTHO05D000004 8.3e-09 65.5 86 30.2
Atru.chr10.81 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-08 65.1 154 28.6
Atru.chr5.1996 Acer truncatum HOM05D000003 ORTHO05D000022 1.1e-08 65.1 173 27.2
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 1.1e-08 65.1 155 27.7
PGR119G2417 Punica granatum HOM05D000003 ORTHO05D000004 1.1e-08 65.1 403 20.1
Atru.chr13.2390 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-08 64.3 147 27.2
QL03p010769 Quercus lobata HOM05D000155 ORTHO05D000022 1.8e-08 64.3 111 29.7
Atru.chr1.1302 Acer truncatum HOM05D000003 ORTHO05D000004 2.4e-08 63.9 146 26.7
COL.COLO4_10353 Corchorus olitorius HOM05D000003 ORTHO05D000006 2.4e-08 63.9 374 18.7
Atru.chr1.956 Acer truncatum HOM05D000003 ORTHO05D000006 3.1e-08 63.5 148 25.0
QL01p022100 Quercus lobata HOM05D000003 ORTHO05D000004 3.1e-08 63.5 208 21.6
QL03p058466 Quercus lobata HOM05D000003 ORTHO05D000022 3.1e-08 63.5 165 28.5
Atru.chr1.776 Acer truncatum HOM05D000003 ORTHO05D000004 4.1e-08 63.2 147 25.2
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 4.1e-08 63.2 146 28.1
Psat0s2481g0120 Pisum sativum HOM05D009122 ORTHO05D011085 4.1e-08 63.2 77 36.4
Psat6g066320 Pisum sativum HOM05D000003 ORTHO05D011085 4.1e-08 63.2 241 24.1
Psat7g077160 Pisum sativum HOM05D000003 ORTHO05D011148 4.1e-08 63.2 179 25.1
Atru.chr10.890 Acer truncatum HOM05D000003 ORTHO05D000022 5.4e-08 62.8 145 27.6
LjContig00408g0006573 Lotus japonicus HOM05D000650 ORTHO05D010020 5.4e-08 62.8 145 24.1
Psat4g006520 Pisum sativum HOM05D000003 ORTHO05D000006 5.4e-08 62.8 97 32.0
SEGI_15436 Sequoiadendron giganteum HOM05D001690 ORTHO05D013089 5.4e-08 62.8 128 32.0
Actinidia03487 Actinidia chinensis HOM05D000003 ORTHO05D000022 7.0e-08 62.4 118 31.4
Lj5g0009009 Lotus japonicus HOM05D000003 ORTHO05D000007 7.0e-08 62.4 166 25.3
TPR.G26312 Trifolium pratense HOM05D009122 ORTHO05D011085 7.0e-08 62.4 66 37.9
CSS0043443 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 9.1e-08 62.0 173 25.4
QL06p035443 Quercus lobata HOM05D000003 ORTHO05D000022 1.2e-07 61.6 160 30.0
Psat0s2532g0040 Pisum sativum HOM05D002184 ORTHO05D002379 1.6e-07 61.2 77 41.6
Atru.chr1.1905 Acer truncatum HOM05D000003 ORTHO05D000022 2.0e-07 60.8 149 24.8
Psat2g103080 Pisum sativum HOM05D000003 ORTHO05D000004 2.0e-07 60.8 216 24.1
Atru.chr1.3365 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-07 60.5 190 22.1
Atru.chr6.1145 Acer truncatum HOM05D000003 ORTHO05D012910 2.7e-07 60.5 141 26.2
Psat7g061680 Pisum sativum HOM05D032678 ORTHO05D011085 2.7e-07 60.5 117 31.6
Prupe.4G161900 Prunus persica HOM05D000003 ORTHO05D000022 2.7e-07 60.5 99 30.3
Atru.chr5.2276 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-07 60.1 153 22.9
Thecc.08G073600 Theobroma cacao HOM05D000650 ORTHO05D010020 3.5e-07 60.1 138 24.6
TPR.G36225 Trifolium pratense HOM05D013665 ORTHO05D011148 3.5e-07 60.1 113 29.2
vmacro14890 Vaccinium macrocarpon HOM05D002989 ORTHO05D003218 3.5e-07 60.1 154 28.6
Atru.chr7.949 Acer truncatum HOM05D000003 ORTHO05D000022 4.5e-07 59.7 149 26.8
COL.COLO4_07368 Corchorus olitorius HOM05D000003 ORTHO05D000022 4.5e-07 59.7 210 22.9
COL.COLO4_27635 Corchorus olitorius HOM05D000003 ORTHO05D000022 4.5e-07 59.7 146 29.5
Lj4g0002379 Lotus japonicus HOM05D000003 ORTHO05D000022 4.5e-07 59.7 175 23.4
QL09p016348 Quercus lobata HOM05D000155 ORTHO05D000022 4.5e-07 59.7 139 28.8
RcHm_v2.0_Chr2g0125461 Rosa chinensis HOM05D000003 ORTHO05D000022 4.5e-07 59.7 148 24.3
Atru.chr2.2708 Acer truncatum HOM05D000003 ORTHO05D000022 5.9e-07 59.3 151 25.2
CSS0027105 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.9e-07 59.3 163 25.2
CiPaw.09G167800 Carya illinoinensis HOM05D000003 ORTHO05D000004 5.9e-07 59.3 151 27.2
Manes.07G103102 Manihot esculenta HOM05D000003 ORTHO05D000004 5.9e-07 59.3 106 29.2
Psat0ss3759g0280 Pisum sativum HOM05D009122 ORTHO05D011085 5.9e-07 59.3 99 28.3
Psat2g152240 Pisum sativum HOM05D000003 ORTHO05D000022 5.9e-07 59.3 76 42.1
Psat3g158560 Pisum sativum HOM05D017489 ORTHO05D025856 5.9e-07 59.3 63 39.7
Prupe.1G446500 Prunus persica HOM05D000003 ORTHO05D000022 5.9e-07 59.3 153 27.5
Atru.chr11.1461 Acer truncatum HOM05D000003 ORTHO05D000022 7.7e-07 58.9 146 19.9
Atru.chr2.1419 Acer truncatum HOM05D000003 ORTHO05D000022 7.7e-07 58.9 147 24.5
Actinidia31778 Actinidia chinensis HOM05D000155 ORTHO05D000022 7.7e-07 58.9 145 28.3
COL.COLO4_35274 Corchorus olitorius HOM05D000650 ORTHO05D010020 7.7e-07 58.9 136 24.3
Psat3g068000 Pisum sativum HOM05D000003 ORTHO05D011085 7.7e-07 58.9 132 31.1
TPR.G22534 Trifolium pratense HOM05D000003 ORTHO05D000007 7.7e-07 58.9 102 30.4
Atru.chr1.1336 Acer truncatum HOM05D000003 ORTHO05D000022 1.0e-06 58.5 149 26.8
Atru.chr11.1308 Acer truncatum HOM05D000003 ORTHO05D000022 1.0e-06 58.5 148 26.4
Lalb_Chr10g0102781 Lupinus albus HOM05D000650 ORTHO05D010020 1.0e-06 58.5 145 24.1
SHI38779 Sapria himalayana HOM05D000155 ORTHO05D000022 1.0e-06 58.5 115 28.7
Atru.chr10.1248 Acer truncatum HOM05D000003 ORTHO05D000022 1.3e-06 58.2 141 31.9
Atru.chr6.1028 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-06 58.2 144 25.7
Cpa.g.sc21.40 Carica papaya HOM05D000650 ORTHO05D010020 1.3e-06 58.2 143 23.8
Psat7g063800 Pisum sativum HOM05D049989 ORTHO05D000022 1.3e-06 58.2 126 25.4
SHI10451 Sapria himalayana HOM05D000155 ORTHO05D000022 1.3e-06 58.2 115 27.0
TWI56G0415 Tripterygium wilfordii HOM05D000650 ORTHO05D010020 1.3e-06 58.2 136 25.0
Psat3g135640 Pisum sativum HOM05D017489 ORTHO05D000022 1.7e-06 57.8 132 28.8
Prupe.6G118100 Prunus persica HOM05D000003 ORTHO05D000022 1.7e-06 57.8 99 29.3
Prupe.6G201000 Prunus persica HOM05D000003 ORTHO05D000022 1.7e-06 57.8 99 29.3
TPR.G13682 Trifolium pratense HOM05D009122 ORTHO05D412416 1.7e-06 57.8 110 27.3
Atru.chr9.658 Acer truncatum HOM05D000003 ORTHO05D000022 2.3e-06 57.4 132 29.5
CSS0029848 Camellia sinensis var. sinensis HOM05D025174 ORTHO05D012910 2.3e-06 57.4 96 31.2
Atru.chr2.2395 Acer truncatum HOM05D000003 ORTHO05D000022 2.9e-06 57.0 151 28.5
CSS0044635 Camellia sinensis var. sinensis HOM05D025174 ORTHO05D012910 2.9e-06 57.0 96 31.2
Haze_01807 Corylus avellana HOM05D000650 ORTHO05D010020 2.9e-06 57.0 138 23.9
FvH4_2g12061 Fragaria vesca HOM05D000003 ORTHO05D000022 2.9e-06 57.0 129 25.6
Lj1P688T36 Lonicera japonica HOM05D000155 ORTHO05D000022 2.9e-06 57.0 129 26.4
RcHm_v2.0_Chr5g0018821 Rosa chinensis HOM05D000003 ORTHO05D000022 2.9e-06 57.0 93 32.3
TPR.G16685 Trifolium pratense HOM05D013665 ORTHO05D012377 2.9e-06 57.0 126 30.2
TPR.G20657 Trifolium pratense HOM05D009122 ORTHO05D011085 2.9e-06 57.0 84 33.3
Actinidia10270 Actinidia chinensis HOM05D000650 ORTHO05D010020 3.8e-06 56.6 105 27.6
Lj1P687T17 Lonicera japonica HOM05D000155 ORTHO05D000022 3.8e-06 56.6 129 27.1
TPR.G35390 Trifolium pratense HOM05D000003 ORTHO05D000004 3.8e-06 56.6 81 34.6
Atru.chr5.2238 Acer truncatum HOM05D000003 ORTHO05D000004 5.0e-06 56.2 149 21.5
arahy.Tifrunner.gnm1.ann1.KPZY4F Arachis hypogaea HOM05D000003 ORTHO05D000022 5.0e-06 56.2 147 27.2
FvH4_5g34302 Fragaria vesca HOM05D000650 ORTHO05D010020 5.0e-06 56.2 136 24.3
Psat1g083000 Pisum sativum HOM05D000003 ORTHO05D015733 5.0e-06 56.2 123 26.8
Atru.chr13.1154 Acer truncatum HOM05D000003 ORTHO05D000004 6.5e-06 55.8 129 29.5
TPR.G17557 Trifolium pratense HOM05D006551 ORTHO05D008546 6.5e-06 55.8 129 24.8
arahy.Tifrunner.gnm1.ann1.87D0WY Arachis hypogaea HOM05D000003 ORTHO05D000022 8.6e-06 55.5 80 35.0
Lj4g0003656 Lotus japonicus HOM05D000003 ORTHO05D000007 8.6e-06 55.5 103 32.0
Phvul.008G183100 Phaseolus vulgaris HOM05D000650 ORTHO05D010020 8.6e-06 55.5 145 23.4


User provided reference genes

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