Gene: vmacro01816
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro01816
- Transcript Identifier vmacro01816-RA
- Gene Type Coding gene
- Location chr1_Vaccinium_macrocarpon_Stevens_v1 : 7545849-7551969 : positive
Gene Family Information
- ID HOM05D000489
- #Genes/#Species 1089/94
- Phylogenetic origin
- ID ORTHO05D000372
- #Genes/#Species 1038/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id vmacro01816_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to At5g64080: Non-specific lipid-transfer protein-like protein At5g64080 (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006869 | IEA | InterPro | lipid transport | |
| GO:0010089 | ISO | PLAZA Integrative Orthology | xylem development | AT2G13820 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0004523 | IEA | InterPro | RNA-DNA hybrid ribonuclease activity | |
| GO:0008289 | IEA | InterPro | lipid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G13820 |
| GO:0031225 | ISO | PLAZA Integrative Orthology | anchored component of membrane | AT5G09370 |
| GO:0032578 | ISO | PLAZA Integrative Orthology | aleurone grain membrane | Os03g0385400 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR044730 | Ribonuclease H-like domain, plant type |
| IPR036397 | Ribonuclease H superfamily |
| IPR002156 | Ribonuclease H domain |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR000528 | Plant non-specific lipid-transfer protein/Par allergen |
| IPR036312 | Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily |
| IPR016140 | Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain |
| IPR043325 | Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein |
| Mapman id | Description |
|---|---|
| 21.4.1.1.4 | Cell wall organisation.cell wall proteins.hydroxyproline-rich glycoprotein activities.arabinogalactan-protein activities.Xylogen-type arabinogalactan protein (XYP/XYLP) |