Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 0.0e+00 1354.3 673 100.0
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 0.0e+00 1202.6 675 88.1
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 0.0e+00 1168.3 675 85.9
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 0.0e+00 1154.4 689 83.5
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 6.2e-299 1030.4 690 75.5
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 1.4e-298 1029.2 681 75.5
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 9.2e-295 1016.5 682 76.0
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 6.2e-291 1003.8 679 73.8
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 1.9e-287 992.3 683 72.9
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 2.1e-286 988.8 690 72.8
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 7.3e-284 980.3 673 72.7
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 9.5e-284 979.9 680 72.4
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 2.8e-283 978.4 693 71.0
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 2.8e-283 978.4 682 71.7
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 4.7e-283 977.6 685 72.3
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 2.4e-282 975.3 682 71.3
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 4.0e-282 974.5 689 71.1
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 5.8e-281 970.7 686 70.8
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 6.4e-280 967.2 688 70.6
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 1.4e-279 966.1 685 71.5
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 3.2e-279 964.9 680 71.5
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 5.4e-279 964.1 697 69.9
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 5.4e-279 964.1 679 71.1
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 1.2e-278 963.0 676 70.9
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 2.7e-278 961.8 685 69.9
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 3.5e-278 961.4 666 70.6
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 6.0e-278 960.7 691 71.2
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 2.3e-277 958.7 691 70.5
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 3.9e-277 958.0 685 70.4
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 6.6e-277 957.2 676 70.6
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 1.5e-276 956.1 690 70.7
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 2.5e-276 955.3 681 69.5
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 3.3e-276 954.9 677 70.2
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 1.6e-275 952.6 670 70.4
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 4.7e-275 951.0 672 69.5
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 1.1e-274 949.9 699 69.8
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.4e-274 949.5 670 69.7
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 2.4e-274 948.7 695 68.6
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 4.0e-274 948.0 622 74.3
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 4.0e-274 948.0 675 68.9
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 1.3e-272 943.0 680 71.2
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 4.9e-272 941.0 679 69.2
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 1.9e-271 939.1 687 70.3
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 1.7e-269 932.6 667 69.3
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 3.9e-269 931.4 636 69.7
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 8.7e-269 930.2 681 68.7
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 1.9e-268 929.1 671 69.9
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 5.6e-268 927.5 686 69.0
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 2.1e-267 925.6 693 67.7
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 2.8e-267 925.2 680 69.6
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 1.1e-266 923.3 639 72.0
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 4.0e-266 921.4 678 69.8
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 2.6e-265 918.7 679 69.4
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 2.6e-265 918.7 683 68.7
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 7.6e-265 917.1 686 68.4
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 4.9e-264 914.4 680 67.8
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 8.4e-264 913.7 676 68.8
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 1.9e-263 912.5 634 70.5
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 1.9e-263 912.5 683 66.9
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 3.2e-263 911.8 681 66.7
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 3.2e-263 911.8 676 67.2
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 4.2e-263 911.4 682 66.6
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 4.2e-263 911.4 686 68.2
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 9.3e-263 910.2 682 66.4
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 1.2e-262 909.8 677 68.1
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 1.6e-262 909.4 681 66.5
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 2.1e-262 909.1 680 67.1
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 3.5e-262 908.3 680 66.6
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 1.0e-261 906.7 682 66.3
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 6.7e-261 904.0 688 65.6
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 1.5e-260 902.9 682 67.2
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 1.9e-260 902.5 690 67.4
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 7.4e-260 900.6 673 66.3
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 9.6e-260 900.2 684 68.3
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 1.8e-253 879.4 698 66.0
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 1.8e-253 879.4 614 69.2
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 8.7e-253 877.1 664 66.1
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 1.8e-250 869.4 625 68.2
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 1.3e-248 863.2 673 64.9
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 1.1e-242 843.6 637 65.9
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 1.4e-242 843.2 614 67.8
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 2.0e-241 839.3 561 75.0
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 3.2e-239 832.0 637 65.9
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 5.7e-236 821.2 563 74.1
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 3.4e-233 812.0 566 71.7
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 2.2e-232 809.3 558 70.8
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 3.8e-232 808.5 679 62.2
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 6.5e-232 807.7 795 56.4
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 2.7e-230 802.4 576 67.5
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 3.0e-229 798.9 632 63.3
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 4.5e-225 785.0 806 53.0
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 4.7e-214 748.4 555 67.9
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 9.7e-212 740.7 661 60.1
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 6.8e-205 718.0 570 61.4
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 1.1e-199 700.7 477 74.2
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 1.5e-188 663.7 792 47.7
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 7.6e-164 581.6 546 56.2
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 1.5e-148 530.8 445 59.8
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 5.3e-141 505.8 377 67.4
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 1.5e-135 487.6 526 49.8
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 3.3e-135 486.5 274 86.1
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 5.9e-116 422.5 556 46.0
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 9.4e-106 388.7 350 60.0
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 7.7e-100 369.0 259 68.0
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 4.7e-97 359.8 321 58.9
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 4.7e-97 359.8 321 58.9
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 6.1e-89 332.8 572 37.2
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 8.6e-83 312.4 231 63.6
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 4.9e-78 296.6 236 65.7
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 4.6e-60 236.9 566 30.4
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 5.2e-56 223.4 252 47.6
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 1.3e-51 208.8 242 53.3
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 1.5e-42 178.7 180 51.7
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 9.3e-37 159.5 146 57.5
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 7.9e-36 156.4 124 60.5
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 5.1e-35 153.7 149 58.4
MCO14G318 Micromonas commoda HOM05D006589 ORTHO05D008350 1.1e-10 72.8 124 38.7
Cre07.g348500 Chlamydomonas reinhardtii HOM05D006589 ORTHO05D008350 1.1e-08 66.2 79 36.7


User provided reference genes

Program Settings