Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g014760 Pisum sativum HOM05D005790 ORTHO05D007464 1.9e-80 302.4 143 100.0
Ca_02056_v3 Cicer arietinum L. HOM05D005790 ORTHO05D007464 5.3e-75 284.3 141 93.6
TPR.G30295 Trifolium pratense HOM05D005790 ORTHO05D007464 9.1e-75 283.5 141 92.9
Medtr3g113190 Medicago truncatula HOM05D005790 ORTHO05D007464 1.3e-73 279.6 141 92.9
Lj1g0012079 Lotus japonicus HOM05D005790 ORTHO05D007464 2.9e-73 278.5 141 90.1
Glyma.06G026400 Glycine max HOM05D005790 ORTHO05D007464 1.6e-71 272.7 143 86.7
arahy.Tifrunner.gnm1.ann1.BXK9RQ Arachis hypogaea HOM05D005790 ORTHO05D007464 1.8e-70 269.2 141 85.1
arahy.Tifrunner.gnm1.ann1.S6ZM1I Arachis hypogaea HOM05D005790 ORTHO05D007464 1.8e-70 269.2 141 85.1
VMungo1309G1814 Vigna mungo HOM05D005790 ORTHO05D007464 2.3e-70 268.9 143 85.3
Phvul.009G014700 Phaseolus vulgaris HOM05D005790 ORTHO05D007464 3.0e-70 268.5 143 84.6
Lalb_Chr08g0246071 Lupinus albus HOM05D005790 ORTHO05D007464 6.7e-70 267.3 143 84.6
MD15G1016100 Malus domestica HOM05D005790 ORTHO05D007464 6.9e-67 257.3 141 80.1
Prupe.1G369900 Prunus persica HOM05D005790 ORTHO05D007464 1.2e-66 256.5 141 78.0
Dinv31817 Davidia involucrata HOM05D005790 ORTHO05D007464 3.4e-66 255.0 141 79.4
COL.COLO4_26188 Corchorus olitorius HOM05D005790 ORTHO05D007464 4.5e-66 254.6 141 79.4
MD08G1017100 Malus domestica HOM05D005790 ORTHO05D007464 4.5e-66 254.6 141 78.7
FAN15G2431 Fragaria x ananassa HOM05D005790 ORTHO05D007464 2.2e-65 252.3 141 80.1
Manes.13G125500 Manihot esculenta HOM05D005790 ORTHO05D007464 2.2e-65 252.3 141 79.4
FvH4_2g39120 Fragaria vesca HOM05D005790 ORTHO05D007464 6.5e-65 250.8 141 79.4
RcHm_v2.0_Chr6g0272131 Rosa chinensis HOM05D005790 ORTHO05D007464 8.5e-65 250.4 141 78.7
CANSAT01G0079 Cannabis sativa HOM05D005790 ORTHO05D007464 1.1e-64 250.0 143 79.7
Peaxi162Scf00085g00528 Petunia axillaris HOM05D005790 ORTHO05D007464 1.1e-64 250.0 139 78.4
CiPaw.07G153400 Carya illinoinensis HOM05D005790 ORTHO05D007464 1.4e-64 249.6 141 79.4
Potri.009G002100 Populus trichocarpa HOM05D005790 ORTHO05D007464 1.4e-64 249.6 141 79.4
FAN20G0385 Fragaria x ananassa HOM05D005790 ORTHO05D007464 1.9e-64 249.2 138 81.2
FAN20G1847 Fragaria x ananassa HOM05D005790 ORTHO05D007464 1.9e-64 249.2 138 81.2
PGR031G1208 Punica granatum HOM05D005790 ORTHO05D007464 1.9e-64 249.2 141 76.6
CSS0048998 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 5.5e-64 247.7 140 77.1
CSS0050056 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 5.5e-64 247.7 140 77.1
Gohir.A06G005800 Gossypium hirsutum HOM05D005790 ORTHO05D007464 5.5e-64 247.7 141 75.9
Actinidia37976 Actinidia chinensis HOM05D005790 ORTHO05D007464 1.2e-63 246.5 141 78.7
Cfa013914 Carpinus fangiana HOM05D005790 ORTHO05D007464 1.2e-63 246.5 141 78.0
Atru.BG.234.p Acer truncatum HOM05D005790 ORTHO05D007464 1.6e-63 246.1 141 75.9
Atru.chr13.345 Acer truncatum HOM05D005790 ORTHO05D007464 1.6e-63 246.1 141 75.9
Gorai.010G006000 Gossypium raimondii HOM05D005790 ORTHO05D007464 1.6e-63 246.1 141 75.9
Gohir.D06G001600 Gossypium hirsutum HOM05D005790 ORTHO05D007464 2.1e-63 245.7 141 76.6
Lj4A790T66 Lonicera japonica HOM05D005790 ORTHO05D007464 6.1e-63 244.2 141 75.9
PGSC0003DMG400016117 Solanum tuberosum HOM05D005790 ORTHO05D007464 1.0e-62 243.4 139 77.7
TWI36G0257 Tripterygium wilfordii HOM05D005790 ORTHO05D007464 1.4e-62 243.0 141 76.6
Haze_22599 Corylus avellana HOM05D005790 ORTHO05D007464 1.8e-62 242.7 141 78.0
Hund17229 Selenicereus undatus HOM05D005790 ORTHO05D007464 3.9e-62 241.5 141 74.5
vmacro21704 Vaccinium macrocarpon HOM05D005790 ORTHO05D007464 3.9e-62 241.5 141 75.9
GSVIVG01009836001 Vitis vinifera HOM05D005790 ORTHO05D007464 5.2e-62 241.1 140 75.7
Solyc11g010910.3 Solanum lycopersicum HOM05D005790 ORTHO05D007464 8.8e-62 240.4 139 76.3
Sopen11g005650 Solanum pennellii HOM05D005790 ORTHO05D007464 8.8e-62 240.4 139 76.3
Zm00001eb378230 Zea mays HOM05D005790 ORTHO05D007464 2.0e-61 239.2 140 75.0
Cc10_g02010 Coffea canephora HOM05D005790 ORTHO05D007464 2.6e-61 238.8 141 74.5
MELO3C024652.2 Cucumis melo HOM05D005790 ORTHO05D007464 9.7e-61 236.9 141 74.5
PSO675G3524 Papaver somniferum HOM05D005790 ORTHO05D007464 1.7e-60 236.1 141 73.8
TAR381G1687 Trochodendron aralioides HOM05D005790 ORTHO05D007464 1.7e-60 236.1 141 73.8
MSTRG.18414 Avicennia marina HOM05D005790 ORTHO05D007464 2.2e-60 235.7 140 73.6
Ciclev10008674m.g Citrus clementina HOM05D005790 ORTHO05D007464 2.2e-60 235.7 140 75.0
Sed0009865 Sechium edule HOM05D005790 ORTHO05D007464 2.8e-60 235.3 140 74.3
CsaV3_1G045470 Cucumis sativus L. HOM05D005790 ORTHO05D007464 3.7e-60 235.0 141 74.5
CsaV3_UNG233270 Cucumis sativus L. HOM05D005790 ORTHO05D007464 3.7e-60 235.0 141 74.5
ECA247G0379 Erigeron canadensis HOM05D005790 ORTHO05D007464 6.3e-60 234.2 141 73.0
PSO541G0736 Papaver somniferum HOM05D005790 ORTHO05D007464 1.1e-59 233.4 141 73.0
Aa31LG4G5850 Aethionema arabicum HOM05D005790 ORTHO05D007464 2.4e-59 232.3 140 72.1
Eucgr.J01034 Eucalyptus grandis HOM05D005790 ORTHO05D007464 2.4e-59 232.3 141 75.2
Os06g0131100 Oryza sativa ssp. japonica HOM05D005790 ORTHO05D007464 9.1e-59 230.3 140 74.3
CARHR237760 Cardamine hirsuta HOM05D005790 ORTHO05D007464 1.6e-58 229.6 140 71.4
AL7G22390 Arabidopsis lyrata HOM05D005790 ORTHO05D007464 2.0e-58 229.2 140 72.9
DCAR_017500 Daucus carota HOM05D005790 ORTHO05D007464 2.0e-58 229.2 141 71.6
Sp7g27670 Schrenkiella parvula HOM05D005790 ORTHO05D007464 5.9e-58 227.6 140 70.7
Migut.D00577 Erythranthe guttata HOM05D005790 ORTHO05D007464 7.7e-58 227.3 140 70.7
CDE05G1328 Ceratophyllum demersum HOM05D005790 ORTHO05D007464 1.3e-57 226.5 141 67.4
AUR62014415 Chenopodium quinoa HOM05D005790 ORTHO05D007464 1.3e-57 226.5 141 70.2
Thhalv10025433m.g Eutrema salsugineum HOM05D005790 ORTHO05D007464 1.3e-57 226.5 140 70.0
HanXRQChr02g0043921 Helianthus annuus HOM05D005790 ORTHO05D007464 1.3e-57 226.5 141 70.9
AT4G29860 Arabidopsis thaliana HOM05D005790 ORTHO05D007464 5.0e-57 224.6 140 70.7
Thecc.08G038500 Theobroma cacao HOM05D005790 ORTHO05D007464 8.5e-57 223.8 141 70.2
BraA01t00778Z Brassica rapa HOM05D005790 ORTHO05D007464 1.1e-56 223.4 139 71.2
EL10Ac1g00445 Beta vulgaris HOM05D005790 ORTHO05D007464 1.5e-56 223.0 141 68.8
Carub.0004s1477 Capsella rubella HOM05D005790 ORTHO05D007464 3.2e-56 221.9 140 70.0
SalBow1G3128 Salvia bowleyana HOM05D005790 ORTHO05D007464 4.2e-56 221.5 141 70.2
Aqoxy2G03135 Aquilegia oxysepala HOM05D005790 ORTHO05D007464 5.5e-56 221.1 139 68.3
C01p09340 Brassica napus HOM05D005790 ORTHO05D007464 9.4e-56 220.3 139 69.1
BolC1t00922H Brassica oleracea HOM05D005790 ORTHO05D007464 9.4e-56 220.3 139 69.1
QL02p010842 Quercus lobata HOM05D005790 ORTHO05D007464 1.2e-55 219.9 208 54.8
Lsat_1_v5_gn_1_16241 Lactuca sativa HOM05D005790 ORTHO05D007464 1.6e-55 219.5 139 69.8
AUR62019151 Chenopodium quinoa HOM05D005790 ORTHO05D007464 2.1e-55 219.2 141 68.1
SGA_v2.0_scaffold8G04609 Striga asiatica HOM05D005790 ORTHO05D007464 2.1e-55 219.2 141 66.0
A01p08300 Brassica napus HOM05D005790 ORTHO05D007464 3.6e-55 218.4 139 69.8
SHI02412 Sapria himalayana HOM05D005790 ORTHO05D007464 3.6e-55 218.4 137 69.3
ATR0945G002 Amborella trichopoda HOM05D005790 ORTHO05D007464 1.0e-54 216.9 137 70.8
Rhsim06G0026000 Rhododendron simsii HOM05D005790 ORTHO05D007464 2.3e-54 215.7 211 51.7
Sc02g0005160 Simmondsia chinensis HOM05D005790 ORTHO05D007464 2.6e-53 212.2 136 69.1
unitig_26.g10135 Utricularia gibba HOM05D005790 ORTHO05D007464 7.5e-53 210.7 140 65.0
Oeu061776.2 Olea europaea HOM05D005790 ORTHO05D000708 7.0e-51 204.1 191 52.4
Nitab4.5_0000402g0130 Nicotiana tabacum HOM05D005790 ORTHO05D007464 1.2e-50 203.4 120 77.5
Duzib093G0196 Durio zibethinus HOM05D005790 ORTHO05D007464 5.0e-49 198.0 110 78.2
Gorai.010G006300 Gossypium raimondii HOM05D005790 ORTHO05D007464 6.1e-47 191.0 109 75.2
ClCG05G018560 Citrullus lanatus HOM05D005790 ORTHO05D007464 3.0e-46 188.7 109 75.2
THA.LOC104811397 Tarenaya hassleriana HOM05D005790 ORTHO05D007464 8.3e-44 180.6 110 70.9
Sabra09G0000400 Salix brachista HOM05D005790 ORTHO05D007464 1.8e-43 179.5 112 74.1
Nn5g29250 Nelumbo nucifera HOM05D005790 ORTHO05D007464 3.1e-43 178.7 107 71.0
RcHm_v2.0_Chr6g0302371 Rosa chinensis HOM05D005790 ORTHO05D007464 1.6e-39 166.4 178 50.6
SMO147G0253 Selaginella moellendorffii HOM05D005790 ORTHO05D007464 7.5e-37 157.5 140 49.3
FAN27G0896 Fragaria x ananassa HOM05D005790 ORTHO05D007464 1.3e-36 156.8 141 55.3
Mapoly0014s0217 Marchantia polymorpha HOM05D005790 ORTHO05D007464 1.1e-35 153.7 140 50.0
Actinidia29793 Actinidia chinensis HOM05D005790 ORTHO05D007464 9.2e-35 150.6 89 78.7
CBR_g7976 Chara braunii HOM05D001993 ORTHO05D004040 2.7e-34 149.1 140 47.9
CBR_g24442 Chara braunii HOM05D005790 ORTHO05D007464 5.9e-34 147.9 137 49.6
TWI36G0035 Tripterygium wilfordii HOM05D005790 ORTHO05D007464 5.9e-34 147.9 90 72.2
RcHm_v2.0_Chr4g0408871 Rosa chinensis HOM05D005790 ORTHO05D007464 1.7e-33 146.4 106 63.2
MBI09_g08426_MAGBIO Magnolia biondii HOM05D005790 ORTHO05D007464 5.0e-33 144.8 89 73.0
Aqoxy4G01228 Aquilegia oxysepala HOM05D005790 ORTHO05D007464 1.5e-32 143.3 90 63.3
Pp3c20_12860 Physcomitrium patens HOM05D005790 ORTHO05D007464 6.1e-31 137.9 140 47.9
Ah.05g171860 Amaranthus hybridus HOM05D005790 ORTHO05D007464 2.3e-30 136.0 89 64.0
RcHm_v2.0_Chr6g0302301 Rosa chinensis HOM05D005790 ORTHO05D007464 2.4e-19 99.4 52 78.8
Cpa.g.sc140.30 Carica papaya HOM05D005790 ORTHO05D007464 3.2e-19 99.0 54 81.5
Cre02.g076850 Chlamydomonas reinhardtii HOM05D005790 ORTHO05D007464 3.9e-17 92.0 176 33.5
HPP92_020940 Vanilla planifolia HOM05D005790 ORTHO05D007464 2.5e-16 89.4 55 72.7
RcHm_v2.0_Chr6g0302231 Rosa chinensis HOM05D005790 ORTHO05D007464 4.3e-16 88.6 43 79.1
TAR625G0591 Trochodendron aralioides HOM05D000460 ORTHO05D000333 3.1e-14 82.4 98 44.9
SEGI_12232 Sequoiadendron giganteum HOM05D005790 ORTHO05D007464 2.9e-12 75.9 49 59.2
Hma1.2p1_1776F.1_g301940 Hydrangea macrophylla HOM05D005790 ORTHO05D007464 1.6e-10 70.1 41 70.7
AagrBONN_evm.TU.Sc2ySwM_369.164 Anthoceros agrestis HOM05D005790 ORTHO05D007464 3.3e-08 62.4 51 47.1
MCO14G170 Micromonas commoda HOM05D005790 ORTHO05D007464 6.8e-06 54.7 88 37.5
PRCOL_00000381 Prasinoderma coloniale HOM05D005790 ORTHO05D007832 6.8e-06 54.7 128 33.6


User provided reference genes

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