Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g120680 Pisum sativum HOM05D000216 ORTHO05D003518 2.2e-38 161.8 80 100.0
Psat0s2961g0040 Pisum sativum HOM05D000216 ORTHO05D003518 7.4e-34 146.7 80 90.0
Psat2g079840 Pisum sativum HOM05D000216 ORTHO05D003518 7.4e-34 146.7 80 90.0
Psat6g219440 Pisum sativum HOM05D000216 ORTHO05D003518 7.4e-34 146.7 80 90.0
Psat4g062520 Pisum sativum HOM05D000216 ORTHO05D003518 2.2e-33 145.2 80 88.8
Psat7g033640 Pisum sativum HOM05D000216 ORTHO05D003518 2.8e-33 144.8 80 88.8
Medtr4g051110 Medicago truncatula HOM05D000216 ORTHO05D003518 3.1e-32 141.4 80 86.2
LjContig00318g0019073 Lotus japonicus HOM05D000216 ORTHO05D003518 1.5e-31 139.0 80 85.0
Ah.10g027610 Amaranthus hybridus HOM05D000216 ORTHO05D003518 2.0e-31 138.7 78 87.2
Ah.10g027790 Amaranthus hybridus HOM05D000216 ORTHO05D003518 2.0e-31 138.7 78 87.2
PSO548G0007 Papaver somniferum HOM05D000216 ORTHO05D003518 2.6e-31 138.3 78 85.9
PGR111G0003 Punica granatum HOM05D000216 ORTHO05D003518 2.6e-31 138.3 78 85.9
RcHm_v2.0_CPg0502421 Rosa chinensis HOM05D000216 ORTHO05D003518 4.5e-31 137.5 78 85.9
CsaV3_UNG207820 Cucumis sativus L. HOM05D000216 ORTHO05D003518 5.9e-31 137.1 78 87.2
Potri.013G139670 Populus trichocarpa HOM05D000216 ORTHO05D003518 5.9e-31 137.1 78 85.9
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 5.9e-31 137.1 78 85.9
Sed0001459 Sechium edule HOM05D000216 ORTHO05D003518 5.9e-31 137.1 78 87.2
Sed0001731 Sechium edule HOM05D000216 ORTHO05D003518 5.9e-31 137.1 78 87.2
Sed0025851 Sechium edule HOM05D000216 ORTHO05D003518 5.9e-31 137.1 78 87.2
AUR62021207 Chenopodium quinoa HOM05D000216 ORTHO05D003518 7.7e-31 136.7 78 85.9
AUR62030169 Chenopodium quinoa HOM05D000216 ORTHO05D003518 1.0e-30 136.3 78 84.6
HanXRQChr00c0313g0573451 Helianthus annuus HOM05D000216 ORTHO05D003518 1.0e-30 136.3 78 84.6
HanXRQChr00c0601g0576521 Helianthus annuus HOM05D000216 ORTHO05D003518 1.0e-30 136.3 78 84.6
HanXRQChr08g0210191 Helianthus annuus HOM05D000216 ORTHO05D003518 1.0e-30 136.3 78 84.6
HanXRQChr11g0326621 Helianthus annuus HOM05D000216 ORTHO05D003518 1.0e-30 136.3 78 84.6
HanXRQChr13g0415481 Helianthus annuus HOM05D000216 ORTHO05D003518 1.0e-30 136.3 78 84.6
HanXRQCPg0579811 Helianthus annuus HOM05D000216 ORTHO05D003518 1.0e-30 136.3 78 84.6
Lsat_1_v5_gn_0_46600 Lactuca sativa HOM05D000216 ORTHO05D003518 1.0e-30 136.3 78 84.6
CiPaw.12G030900 Carya illinoinensis HOM05D000216 ORTHO05D003518 1.3e-30 136.0 78 85.9
MELO3C000623.2 Cucumis melo HOM05D000216 ORTHO05D003518 1.7e-30 135.6 78 84.6
LjContig00489g0007578 Lotus japonicus HOM05D000216 ORTHO05D003518 1.7e-30 135.6 78 84.6
Nn020s41500 Nelumbo nucifera HOM05D000216 ORTHO05D003518 1.7e-30 135.6 78 83.3
Nn025s41561 Nelumbo nucifera HOM05D000216 ORTHO05D003518 1.7e-30 135.6 78 83.3
Ah.05g176560 Amaranthus hybridus HOM05D000216 ORTHO05D003518 2.2e-30 135.2 78 84.6
HanXRQChr14g0428001 Helianthus annuus HOM05D000216 ORTHO05D003518 2.2e-30 135.2 78 82.1
HanXRQChr14g0428021 Helianthus annuus HOM05D000216 ORTHO05D003518 2.2e-30 135.2 78 82.1
Psat6g018440 Pisum sativum HOM05D000216 ORTHO05D003518 2.9e-30 134.8 78 85.9
MSTRG.22048 Avicennia marina HOM05D000216 ORTHO05D003518 3.8e-30 134.4 78 83.3
arahy.Tifrunner.gnm1.ann1.RU7F0N Arachis hypogaea HOM05D000216 ORTHO05D003518 5.0e-30 134.0 78 83.3
Potri.019G028700 Populus trichocarpa HOM05D000216 ORTHO05D003518 5.0e-30 134.0 78 83.3
Lalb_Chr01g0008431 Lupinus albus HOM05D000216 ORTHO05D003518 6.5e-30 133.7 78 85.9
Lalb_Chr09g0335351 Lupinus albus HOM05D000216 ORTHO05D003518 6.5e-30 133.7 78 85.9
Psat0s1586g0160 Pisum sativum HOM05D000216 ORTHO05D003518 6.5e-30 133.7 78 84.6
QL93p1261_0001 Quercus lobata HOM05D000216 ORTHO05D003518 6.5e-30 133.7 78 83.3
Aa31csc39G170 Aethionema arabicum HOM05D000216 ORTHO05D003518 8.5e-30 133.3 78 83.3
BcaC05g28802 Brassica carinata HOM05D000216 ORTHO05D003518 8.5e-30 133.3 78 83.3
BNapus_Darmor_BZH_scaffold_253p00050 Brassica napus HOM05D000216 ORTHO05D003518 8.5e-30 133.3 78 83.3
BolSC29t60572H Brassica oleracea HOM05D000216 ORTHO05D003518 8.5e-30 133.3 78 83.3
BolSC37t60769H Brassica oleracea HOM05D000216 ORTHO05D003518 8.5e-30 133.3 78 83.3
BolSC45t60936H Brassica oleracea HOM05D000216 ORTHO05D003518 8.5e-30 133.3 78 83.3
BolSC46t60986H Brassica oleracea HOM05D000216 ORTHO05D003518 8.5e-30 133.3 78 83.3
BolSC49t61199H Brassica oleracea HOM05D000216 ORTHO05D003518 8.5e-30 133.3 78 83.3
BraSC140t45589Z Brassica rapa HOM05D000216 ORTHO05D003518 8.5e-30 133.3 78 83.3
BraSC25t45883Z Brassica rapa HOM05D000216 ORTHO05D003518 8.5e-30 133.3 78 83.3
BraSC58t46404Z Brassica rapa HOM05D000216 ORTHO05D003518 8.5e-30 133.3 78 83.3
BraSC59t46514Z Brassica rapa HOM05D000216 ORTHO05D003518 8.5e-30 133.3 78 83.3
CAN.G612.2 Capsicum annuum HOM05D000216 ORTHO05D003518 8.5e-30 133.3 78 82.1
CARHR281910 Cardamine hirsuta HOM05D000216 ORTHO05D003518 8.5e-30 133.3 78 83.3
AUR62030121 Chenopodium quinoa HOM05D000216 ORTHO05D003518 1.1e-29 132.9 78 82.1
AL2G20950 Arabidopsis lyrata HOM05D000216 ORTHO05D003518 1.4e-29 132.5 78 83.3
ATCG00160 Arabidopsis thaliana HOM05D000216 ORTHO05D003518 1.4e-29 132.5 78 83.3
CSS0038652 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D003518 1.4e-29 132.5 78 83.3
Migut.D01338 Erythranthe guttata HOM05D000216 ORTHO05D003518 1.4e-29 132.5 78 83.3
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 1.9e-29 132.1 78 82.1
arahy.Tifrunner.gnm1.ann1.D2ZWCD Arachis hypogaea HOM05D000216 ORTHO05D003518 2.5e-29 131.7 78 80.8
arahy.Tifrunner.gnm1.ann1.S81HDC Arachis hypogaea HOM05D000216 ORTHO05D003518 2.5e-29 131.7 78 80.8
unitig_91.g26495 Utricularia gibba HOM05D000216 ORTHO05D003518 2.5e-29 131.7 78 82.1
Atru.chr1.950 Acer truncatum HOM05D000216 ORTHO05D003518 3.2e-29 131.3 74 85.1
Lsat_1_v5_gn_0_22681 Lactuca sativa HOM05D000216 ORTHO05D003518 4.2e-29 131.0 78 80.8
Psat5g134640 Pisum sativum HOM05D000216 ORTHO05D000634 1.2e-28 129.4 100 70.0
DCAR_032473 Daucus carota HOM05D000216 ORTHO05D003518 1.6e-28 129.0 78 82.1
arahy.Tifrunner.gnm1.ann1.3KQL5I Arachis hypogaea HOM05D000216 ORTHO05D003518 4.6e-28 127.5 70 88.6
Medtr7g116690 Medicago truncatula HOM05D000216 ORTHO05D003518 6.1e-28 127.1 80 78.8
Phvul.003G256732 Phaseolus vulgaris HOM05D000216 ORTHO05D003518 1.0e-27 126.3 78 79.5
Hund27995 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.0e-27 126.3 72 83.3
Hund29741 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.0e-27 126.3 72 83.3
Lsat_1_v5_gn_1_56581 Lactuca sativa HOM05D000216 ORTHO05D003518 6.7e-27 123.6 79 75.9
CAN.G201.5 Capsicum annuum HOM05D000216 ORTHO05D003638 1.1e-26 122.9 71 81.7
Atru.chr13.1804 Acer truncatum HOM05D000216 ORTHO05D003518 2.0e-26 122.1 75 78.7
Atru.chr13.1817 Acer truncatum HOM05D000216 ORTHO05D003518 2.0e-26 122.1 75 78.7
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 2.0e-26 122.1 68 88.2
Psat0s2288g0040 Pisum sativum HOM05D000216 ORTHO05D003638 9.7e-26 119.8 71 84.5
Glyma.07G071200 Glycine max HOM05D000216 ORTHO05D003518 1.3e-25 119.4 78 76.9
Migut.C00361 Erythranthe guttata HOM05D000216 ORTHO05D003518 2.2e-25 118.6 78 78.2
Solyc07g021280.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.4e-24 115.9 78 70.5
arahy.Tifrunner.gnm1.ann1.49E3RC Arachis hypogaea HOM05D000216 ORTHO05D003638 2.4e-24 115.2 64 87.5
arahy.Tifrunner.gnm1.ann1.77R9Y6 Arachis hypogaea HOM05D000216 ORTHO05D003638 2.4e-24 115.2 64 87.5
Zm00001eb226420 Zea mays HOM05D000216 ORTHO05D003518 3.1e-24 114.8 78 71.8
EL10As12g24015 Beta vulgaris HOM05D000216 ORTHO05D003638 4.1e-24 114.4 64 87.5
HanXRQChr10g0282511 Helianthus annuus HOM05D000216 ORTHO05D003518 5.3e-24 114.0 64 84.4
arahy.Tifrunner.gnm1.ann1.KPH33C Arachis hypogaea HOM05D000216 ORTHO05D003638 9.1e-24 113.2 64 85.9
MELO3C001352.2 Cucumis melo HOM05D000216 ORTHO05D003518 1.2e-23 112.8 64 84.4
Gohir.A05G307932 Gossypium hirsutum HOM05D000216 ORTHO05D003518 2.0e-23 112.1 78 71.8
Pp3c7_4970 Physcomitrium patens HOM05D000216 ORTHO05D003518 2.0e-23 112.1 77 70.1
Eucgr.J01354 Eucalyptus grandis HOM05D000216 ORTHO05D003518 4.5e-23 110.9 76 75.0
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 5.9e-23 110.5 61 88.5
Hund03957 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund18044 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund27559 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund27611 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund27653 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund27865 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund27918 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund28152 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund28178 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund28276 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund28388 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund28560 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund28651 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund28794 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund29068 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund29351 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund29885 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund30206 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund30310 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund30432 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund30437 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund30661 Selenicereus undatus HOM05D000216 ORTHO05D003518 1.3e-22 109.4 64 81.2
Hund30710 Selenicereus undatus HOM05D000216 ORTHO05D003518 1.3e-22 109.4 64 81.2
Hund30852 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund31037 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Hund31056 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.3e-22 109.4 64 81.2
Ah.10g028510 Amaranthus hybridus HOM05D000216 ORTHO05D003518 1.7e-22 109.0 61 86.9
Solyc00g500051.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.7e-22 109.0 64 81.2
Solyc00g500134.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.7e-22 109.0 64 81.2
Solyc00g500204.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.7e-22 109.0 64 81.2
Solyc00g500291.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.7e-22 109.0 64 81.2
Solyc00g500320.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.7e-22 109.0 64 81.2
Solyc12g062630.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 5.0e-22 107.5 71 71.8
Gohir.D05G308250 Gossypium hirsutum HOM05D000216 ORTHO05D003518 1.9e-21 105.5 76 71.1
Medtr0002s0530 Medicago truncatula HOM05D000216 ORTHO05D003638 4.7e-20 100.9 68 70.6
AUR62043442 Chenopodium quinoa HOM05D000216 ORTHO05D003518 6.1e-20 100.5 55 83.6
HanXRQChr13g0414271 Helianthus annuus HOM05D000216 ORTHO05D003518 1.0e-19 99.8 54 87.0
Hund29488 Selenicereus undatus HOM05D000216 ORTHO05D003518 1.0e-19 99.8 72 70.8
MD16G1263300 Malus domestica HOM05D000216 ORTHO05D003638 1.4e-19 99.4 68 75.0
SEGI_07796 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 2.3e-19 98.6 72 65.3
SEGI_22490 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 2.3e-19 98.6 72 65.3
SEGI_35543 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 2.3e-19 98.6 72 65.3
SEGI_38828 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 2.3e-19 98.6 72 65.3
Mapoly0121s0021 Marchantia polymorpha HOM05D000216 ORTHO05D003518 3.0e-19 98.2 62 72.6
Hund01857 Selenicereus undatus HOM05D000216 ORTHO05D003518 3.0e-19 98.2 69 71.0
Gorai.005G227600 Gossypium raimondii HOM05D000216 ORTHO05D003518 5.1e-19 97.4 65 75.4
Solyc01g017530.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 5.1e-19 97.4 70 68.6
CARHR181360 Cardamine hirsuta HOM05D000216 ORTHO05D003518 3.3e-18 94.7 57 78.9
Gorai.013G017800 Gossypium raimondii HOM05D000216 ORTHO05D003638 1.7e-17 92.4 82 62.2
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 1.7e-17 92.4 54 81.5
arahy.Tifrunner.gnm1.ann1.TG7LSU Arachis hypogaea HOM05D000216 ORTHO05D003638 4.8e-17 90.9 58 77.6
Migut.D01413 Erythranthe guttata HOM05D000216 ORTHO05D003518 5.3e-16 87.4 52 82.7
Eucgr.L01201 Eucalyptus grandis HOM05D000216 ORTHO05D003518 1.6e-15 85.9 68 67.6
Oeu064454.1 Olea europaea HOM05D000216 ORTHO05D003518 2.0e-15 85.5 64 65.6
SEGI_03518 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.3e-14 82.8 57 64.9
SEGI_24812 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.3e-14 82.8 57 64.9
SEGI_26801 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.3e-14 82.8 57 64.9
SEGI_31181 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.3e-14 82.8 57 64.9
TAR636G2296 Trochodendron aralioides HOM05D000216 ORTHO05D008899 2.9e-14 81.6 52 75.0
arahy.Tifrunner.gnm1.ann1.M78D68 Arachis hypogaea HOM05D000216 ORTHO05D003638 8.5e-14 80.1 57 71.9
Medtr3g029540 Medicago truncatula HOM05D000216 ORTHO05D003518 1.1e-13 79.7 43 86.0
arahy.Tifrunner.gnm1.ann1.AE8NLV Arachis hypogaea HOM05D000216 ORTHO05D003518 1.5e-13 79.3 50 80.0
Gohir.A05G086033 Gossypium hirsutum HOM05D000216 ORTHO05D003518 1.5e-13 79.3 47 80.9
SGA_v2.0_scaffold95G28823 Striga asiatica HOM05D000216 ORTHO05D003638 3.2e-13 78.2 46 76.1
COL.COLO4_02626 Corchorus olitorius HOM05D000216 ORTHO05D003518 1.2e-12 76.3 40 85.0
HanXRQChr05g0134331 Helianthus annuus HOM05D000216 ORTHO05D003518 1.2e-12 76.3 42 83.3
HanXRQChr00c0300g0573201 Helianthus annuus HOM05D000216 ORTHO05D003518 1.6e-12 75.9 40 85.0
Gorai.006G086500 Gossypium raimondii HOM05D000216 ORTHO05D003518 2.7e-12 75.1 49 79.6
SEGI_00070 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 2.7e-12 75.1 48 68.8
Eucgr.E00946 Eucalyptus grandis HOM05D000216 ORTHO05D003518 3.6e-12 74.7 51 66.7
SMO086G0062 Selaginella moellendorffii HOM05D000216 ORTHO05D003518 6.1e-12 73.9 72 54.2
Gohir.D09G071550 Gossypium hirsutum HOM05D000216 ORTHO05D003518 8.0e-12 73.6 49 77.6
Nitab4.5_0001639g0020 Nicotiana tabacum HOM05D000216 ORTHO05D003638 1.0e-11 73.2 45 77.8
Lalb_Chr06g0173071 Lupinus albus HOM05D000216 ORTHO05D003518 2.3e-11 72.0 44 81.8
MD16G1100100 Malus domestica HOM05D000216 ORTHO05D003638 2.3e-11 72.0 42 83.3
arahy.Tifrunner.gnm1.ann1.U4J8DX Arachis hypogaea HOM05D000216 ORTHO05D003518 4.0e-11 71.2 78 51.3
CARHR217780 Cardamine hirsuta HOM05D000216 ORTHO05D003518 1.1e-10 69.7 43 74.4
COL.COLO4_03033 Corchorus olitorius HOM05D000216 ORTHO05D003518 2.0e-10 68.9 40 80.0
Nitab4.5_0000312g0230 Nicotiana tabacum HOM05D000216 ORTHO05D003518 2.6e-10 68.6 50 64.0
Medtr7g012800 Medicago truncatula HOM05D000963 ORTHO05D004715 9.7e-10 66.6 40 85.0
Lj2P1239T112 Lonicera japonica HOM05D000216 ORTHO05D003518 2.2e-09 65.5 37 78.4
Gorai.009G328500 Gossypium raimondii HOM05D000216 ORTHO05D003518 6.3e-09 63.9 44 68.2
Gorai.007G076100 Gossypium raimondii HOM05D000216 ORTHO05D003518 4.1e-08 61.2 36 80.6
Nitab4.5_0001140g0210 Nicotiana tabacum HOM05D000216 ORTHO05D003518 5.0e-06 54.3 28 89.3


User provided reference genes

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