Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g087320 Pisum sativum HOM05D003509 ORTHO05D004205 7.3e-87 323.9 172 100.0
Psat5g089680 Pisum sativum HOM05D003509 ORTHO05D004205 7.5e-76 287.3 164 93.9
TPR.G17853 Trifolium pratense HOM05D003509 ORTHO05D004205 9.5e-71 270.4 164 87.8
Medtr3g087350 Medicago truncatula HOM05D003509 ORTHO05D004205 2.8e-70 268.9 164 88.4
Ca_16534_v3 Cicer arietinum L. HOM05D003509 ORTHO05D004205 7.6e-68 260.8 164 84.8
Lalb_Chr11g0075361 Lupinus albus HOM05D003509 ORTHO05D004205 1.3e-64 250.0 164 78.7
arahy.Tifrunner.gnm1.ann1.Y9QREV Arachis hypogaea HOM05D003509 ORTHO05D004205 1.7e-64 249.6 164 80.5
Glyma.18G017600 Glycine max HOM05D003509 ORTHO05D004205 1.7e-64 249.6 159 83.0
arahy.Tifrunner.gnm1.ann1.R7GNZQ Arachis hypogaea HOM05D003509 ORTHO05D004205 2.3e-64 249.2 164 79.9
Phvul.001G251800 Phaseolus vulgaris HOM05D003509 ORTHO05D004205 6.6e-64 247.7 164 79.3
Glyma.11G239800 Glycine max HOM05D003509 ORTHO05D004205 8.6e-64 247.3 159 82.4
VMungo1383G3521 Vigna mungo HOM05D003509 ORTHO05D004205 1.6e-62 243.0 164 78.0
Lalb_Chr23g0277341 Lupinus albus HOM05D003509 ORTHO05D004205 2.8e-62 242.3 164 76.8
Lj6g0023245 Lotus japonicus HOM05D003509 ORTHO05D004205 6.2e-62 241.1 164 78.7
VMungo0251G2994 Vigna mungo HOM05D003509 ORTHO05D004205 9.9e-60 233.8 164 78.0
Gorai.007G239200 Gossypium raimondii HOM05D003509 ORTHO05D004205 2.2e-59 232.6 163 76.1
Gohir.D11G222000 Gossypium hirsutum HOM05D003509 ORTHO05D004205 1.4e-58 229.9 163 74.8
Duzib147G0762 Durio zibethinus HOM05D003509 ORTHO05D004205 5.4e-58 228.0 163 74.2
Gohir.A11G201000 Gossypium hirsutum HOM05D003509 ORTHO05D004205 9.3e-58 227.3 163 74.2
Glyma.05G178900 Glycine max HOM05D003509 ORTHO05D004205 2.7e-57 225.7 165 75.2
Prupe.2G084100 Prunus persica HOM05D003509 ORTHO05D004205 2.7e-57 225.7 163 73.6
Thecc.01G102500 Theobroma cacao HOM05D003509 ORTHO05D004205 2.7e-57 225.7 163 73.0
Dinv21913 Davidia involucrata HOM05D003509 ORTHO05D004205 3.5e-57 225.3 158 75.3
Duzib264G1109 Durio zibethinus HOM05D003509 ORTHO05D004205 3.5e-57 225.3 163 73.6
arahy.Tifrunner.gnm1.ann1.X4FXIQ Arachis hypogaea HOM05D003509 ORTHO05D004205 1.0e-56 223.8 163 73.6
arahy.Tifrunner.gnm1.ann1.41RR18 Arachis hypogaea HOM05D003509 ORTHO05D004205 2.3e-56 222.6 163 73.6
MD07G1066800 Malus domestica HOM05D003509 ORTHO05D004205 2.3e-56 222.6 162 73.5
Glyma.08G136400 Glycine max HOM05D003509 ORTHO05D004205 3.0e-56 222.2 165 74.5
COL.COLO4_09956 Corchorus olitorius HOM05D003509 ORTHO05D004205 3.9e-56 221.9 163 73.0
Eucgr.H04794 Eucalyptus grandis HOM05D003509 ORTHO05D004205 5.1e-56 221.5 160 73.1
Gorai.008G096100 Gossypium raimondii HOM05D003509 ORTHO05D004205 1.1e-55 220.3 163 73.6
Phvul.002G255500 Phaseolus vulgaris HOM05D003509 ORTHO05D004205 1.5e-55 219.9 164 74.4
Ciclev10024720m.g Citrus clementina HOM05D003509 ORTHO05D004205 1.9e-55 219.5 163 71.2
Atru.chr4.74 Acer truncatum HOM05D003509 ORTHO05D004205 2.5e-55 219.2 159 72.3
Gohir.D12G085800 Gossypium hirsutum HOM05D003509 ORTHO05D004205 2.5e-55 219.2 163 73.0
TWI74G1477 Tripterygium wilfordii HOM05D003509 ORTHO05D004205 3.3e-55 218.8 159 72.3
Gohir.A12G087500 Gossypium hirsutum HOM05D003509 ORTHO05D004205 4.3e-55 218.4 163 73.0
CANSAT54G2466 Cannabis sativa HOM05D003509 ORTHO05D004205 7.3e-55 217.6 163 71.2
Actinidia25646 Actinidia chinensis HOM05D003509 ORTHO05D004205 1.3e-54 216.9 158 70.3
QL06p049655 Quercus lobata HOM05D003509 ORTHO05D004205 1.3e-54 216.9 160 71.2
CSS0014940 Camellia sinensis var. sinensis HOM05D003509 ORTHO05D004205 1.6e-54 216.5 158 70.3
Lj4A888G17 Lonicera japonica HOM05D003509 ORTHO05D004205 1.6e-54 216.5 158 71.5
Actinidia36591 Actinidia chinensis HOM05D003509 ORTHO05D004205 2.1e-54 216.1 158 70.3
DCAR_003505 Daucus carota HOM05D003509 ORTHO05D004205 4.8e-54 214.9 157 72.0
FvH4_1g25840 Fragaria vesca HOM05D003509 ORTHO05D004205 6.2e-54 214.5 155 72.9
FAN19G1703 Fragaria x ananassa HOM05D003509 ORTHO05D004205 6.2e-54 214.5 155 72.9
vmacro12953 Vaccinium macrocarpon HOM05D003509 ORTHO05D004205 8.1e-54 214.2 158 70.3
Dinv16288 Davidia involucrata HOM05D003509 ORTHO05D004205 1.4e-53 213.4 158 69.6
FAN28G0272 Fragaria x ananassa HOM05D003509 ORTHO05D004205 1.4e-53 213.4 155 72.3
ECA233G3468 Erigeron canadensis HOM05D003509 ORTHO05D004205 2.4e-53 212.6 162 69.8
PGR102G2959 Punica granatum HOM05D003509 ORTHO05D004205 2.4e-53 212.6 163 67.5
Sc13g0001620 Simmondsia chinensis HOM05D003509 ORTHO05D004205 3.1e-53 212.2 163 68.1
FAN23G1356 Fragaria x ananassa HOM05D003509 ORTHO05D004205 4.0e-53 211.8 155 71.0
EL10As8g23855 Beta vulgaris HOM05D003509 ORTHO05D004205 5.3e-53 211.5 162 71.0
RcHm_v2.0_Chr3g0484971 Rosa chinensis HOM05D003509 ORTHO05D004205 5.3e-53 211.5 163 68.7
CiPaw.03G141400 Carya illinoinensis HOM05D003509 ORTHO05D004205 9.0e-53 210.7 160 70.6
Haze_24942 Corylus avellana HOM05D003509 ORTHO05D004205 9.0e-53 210.7 164 69.5
MD02G1255200 Malus domestica HOM05D003509 ORTHO05D004205 9.0e-53 210.7 156 74.4
Cfa002672 Carpinus fangiana HOM05D003509 ORTHO05D004205 1.2e-52 210.3 164 69.5
Nn4g24883 Nelumbo nucifera HOM05D003509 ORTHO05D004205 7.6e-52 207.6 155 69.7
AUR62026083 Chenopodium quinoa HOM05D003509 ORTHO05D004205 1.3e-51 206.8 163 69.9
TAR628G0828 Trochodendron aralioides HOM05D003509 ORTHO05D004205 1.3e-51 206.8 158 70.3
Manes.06G027900 Manihot esculenta HOM05D003509 ORTHO05D004205 1.7e-51 206.5 163 69.9
AUR62024498 Chenopodium quinoa HOM05D003509 ORTHO05D004205 2.2e-51 206.1 163 69.3
Ah.03g141700 Amaranthus hybridus HOM05D003509 ORTHO05D004205 2.9e-51 205.7 157 71.3
CiPaw.04G098900 Carya illinoinensis HOM05D003509 ORTHO05D004205 2.9e-51 205.7 160 68.8
Potri.005G076200 Populus trichocarpa HOM05D003509 ORTHO05D004205 2.9e-51 205.7 156 69.9
PSO170G3704 Papaver somniferum HOM05D003509 ORTHO05D004205 3.8e-51 205.3 158 65.8
Lsat_1_v5_gn_8_1020 Lactuca sativa HOM05D003509 ORTHO05D004205 4.9e-51 204.9 190 60.5
Hund19140 Selenicereus undatus HOM05D003509 ORTHO05D004205 4.9e-51 204.9 163 68.7
HanXRQChr03g0087081 Helianthus annuus HOM05D003509 ORTHO05D004205 6.4e-51 204.5 151 70.9
PSO017G5498 Papaver somniferum HOM05D003509 ORTHO05D004205 1.1e-50 203.8 158 65.8
Nitab4.5_0000104g0130 Nicotiana tabacum HOM05D003509 ORTHO05D004205 4.2e-50 201.8 158 69.6
Nitab4.5_0006517g0010 Nicotiana tabacum HOM05D003509 ORTHO05D004205 4.2e-50 201.8 159 70.4
Psat0s626g0040 Pisum sativum HOM05D003509 ORTHO05D004205 4.2e-50 201.8 175 70.3
ClCG10G008740 Citrullus lanatus HOM05D003509 ORTHO05D004205 5.4e-50 201.4 159 66.7
Gohir.A02G143400 Gossypium hirsutum HOM05D003509 ORTHO05D004205 7.1e-50 201.1 165 63.0
Gohir.D03G037100 Gossypium hirsutum HOM05D003509 ORTHO05D004205 7.1e-50 201.1 163 64.4
Peaxi162Scf00212g01215 Petunia axillaris HOM05D003509 ORTHO05D004205 7.1e-50 201.1 163 68.7
Gorai.003G038900 Gossypium raimondii HOM05D003509 ORTHO05D004205 9.3e-50 200.7 163 64.4
THA.LOC104807697 Tarenaya hassleriana HOM05D003509 ORTHO05D004205 3.5e-49 198.7 163 64.4
Aqoxy1G03668 Aquilegia oxysepala HOM05D003509 ORTHO05D004205 6.0e-49 198.0 158 66.5
CAN.G441.2 Capsicum annuum HOM05D003509 ORTHO05D004205 1.0e-48 197.2 162 66.7
SalBow5G3202 Salvia bowleyana HOM05D003509 ORTHO05D004205 1.3e-48 196.8 155 68.4
Cc07_g15310 Coffea canephora HOM05D003509 ORTHO05D004205 2.3e-48 196.1 162 65.4
MELO3C018990.2 Cucumis melo HOM05D003509 ORTHO05D004205 3.0e-48 195.7 154 66.9
CsaV3_4G008940 Cucumis sativus L. HOM05D003509 ORTHO05D004205 3.0e-48 195.7 154 66.9
Sp7g36040 Schrenkiella parvula HOM05D003509 ORTHO05D004205 3.0e-48 195.7 165 63.0
Carub.0007s0178 Capsella rubella HOM05D003509 ORTHO05D004205 5.1e-48 194.9 158 65.8
CARHR246850 Cardamine hirsuta HOM05D003509 ORTHO05D004205 5.1e-48 194.9 158 65.8
SGA_v2.0_scaffold47G17784 Striga asiatica HOM05D003509 ORTHO05D004205 5.1e-48 194.9 158 67.1
Aa31LG6G15420 Aethionema arabicum HOM05D003509 ORTHO05D004205 8.7e-48 194.1 158 65.2
Sed0020843 Sechium edule HOM05D003509 ORTHO05D004205 8.7e-48 194.1 159 64.8
CDE04G0016 Ceratophyllum demersum HOM05D003509 ORTHO05D004205 1.5e-47 193.4 160 63.8
Potri.007G092200 Populus trichocarpa HOM05D003509 ORTHO05D004205 1.5e-47 193.4 156 66.7
AT4G39850 Arabidopsis thaliana HOM05D003509 ORTHO05D004205 1.9e-47 193.0 151 68.9
Migut.L00116 Erythranthe guttata HOM05D003509 ORTHO05D004205 1.9e-47 193.0 157 65.6
Sabra07G0075800 Salix brachista HOM05D003509 ORTHO05D004205 1.9e-47 193.0 178 62.4
AL7G12080 Arabidopsis lyrata HOM05D003509 ORTHO05D004205 2.5e-47 192.6 151 68.9
Manes.12G135600 Manihot esculenta HOM05D003509 ORTHO05D004205 3.3e-47 192.2 158 65.8
Solyc04g055120.3 Solanum lycopersicum HOM05D003509 ORTHO05D004205 5.6e-47 191.4 158 66.5
Sopen04g024980 Solanum pennellii HOM05D003509 ORTHO05D004205 5.6e-47 191.4 158 66.5
ATR0763G048 Amborella trichopoda HOM05D003509 ORTHO05D004205 7.4e-47 191.0 161 63.4
Sabra05G0062800 Salix brachista HOM05D003509 ORTHO05D004205 9.6e-47 190.7 180 60.0
MSTRG.3782 Avicennia marina HOM05D003509 ORTHO05D004205 1.6e-46 189.9 159 67.3
Thhalv10024225m.g Eutrema salsugineum HOM05D003509 ORTHO05D004205 4.8e-46 188.3 158 64.6
BcaNung02306 Brassica carinata HOM05D003509 ORTHO05D004205 6.2e-46 188.0 158 62.7
C03p78380 Brassica napus HOM05D003509 ORTHO05D004205 6.2e-46 188.0 158 63.9
BolC3t20097H Brassica oleracea HOM05D003509 ORTHO05D004205 6.2e-46 188.0 158 63.9
BcaNung03401 Brassica carinata HOM05D003509 ORTHO05D004205 8.1e-46 187.6 158 62.0
BolC7t46697H Brassica oleracea HOM05D003509 ORTHO05D004205 8.1e-46 187.6 158 62.0
A08p23300 Brassica napus HOM05D003509 ORTHO05D004205 1.4e-45 186.8 158 63.9
BraA08t34285Z Brassica rapa HOM05D003509 ORTHO05D004205 1.4e-45 186.8 158 63.9
C07p62850 Brassica napus HOM05D003509 ORTHO05D004205 1.8e-45 186.4 158 61.4
HPP92_016104 Vanilla planifolia HOM05D003509 ORTHO05D004205 1.2e-44 183.7 151 64.2
Os05g0107600 Oryza sativa ssp. japonica HOM05D003509 ORTHO05D004205 2.6e-44 182.6 167 63.5
SalBow5G0975 Salvia bowleyana HOM05D003509 ORTHO05D004205 4.5e-44 181.8 183 57.9
Psat2g087480 Pisum sativum HOM05D003509 ORTHO05D004205 9.9e-44 180.6 110 87.3
Zm00001eb140100 Zea mays HOM05D003509 ORTHO05D004205 1.3e-43 180.3 150 64.0
Zm00001eb356090 Zea mays HOM05D003509 ORTHO05D004205 1.7e-43 179.9 167 60.5
SMO351G0412 Selaginella moellendorffii HOM05D003509 ORTHO05D004205 5.1e-40 168.3 157 58.0
Actinidia06565 Actinidia chinensis HOM05D003509 ORTHO05D004205 3.7e-38 162.2 157 54.1
unitig_899.g15007 Utricularia gibba HOM05D003509 ORTHO05D004205 1.4e-37 160.2 103 76.7
Mapoly0144s0028 Marchantia polymorpha HOM05D003509 ORTHO05D004205 6.9e-37 157.9 158 53.2
Pp3c14_6330 Physcomitrium patens HOM05D003509 ORTHO05D004205 3.8e-35 152.1 148 52.7
Cpa.g.sc230.3 Carica papaya HOM05D003509 ORTHO05D004205 2.2e-30 136.3 85 83.5
Rhsim10G0162600 Rhododendron simsii HOM05D003509 ORTHO05D004205 3.7e-30 135.6 157 50.3
SEGI_14643 Sequoiadendron giganteum HOM05D003509 ORTHO05D004205 1.8e-29 133.3 125 56.8
AagrBONN_evm.TU.Sc2ySwM_344.2362 Anthoceros agrestis HOM05D003509 ORTHO05D004205 5.3e-29 131.7 149 51.0
Lalb_Chr08g0231101 Lupinus albus HOM05D003509 ORTHO05D004205 1.9e-23 113.2 92 67.4
ECA233G2957 Erigeron canadensis HOM05D003509 ORTHO05D004205 8.2e-22 107.8 76 77.6
arahy.Tifrunner.gnm1.ann1.7DX4IN Arachis hypogaea HOM05D003509 ORTHO05D004205 8.8e-08 61.2 60 60.0
CSS0024265 Camellia sinensis var. sinensis HOM05D003509 ORTHO05D004205 2.6e-07 59.7 38 68.4
Haze_26893 Corylus avellana HOM05D003509 ORTHO05D004205 4.4e-07 58.9 106 28.3
Hma1.2p1_0308F.1_g120170 Hydrangea macrophylla HOM05D003509 ORTHO05D004205 1.7e-06 57.0 33 75.8
MCO02G363 Micromonas commoda HOM05D003509 ORTHO05D004205 8.2e-06 54.7 111 26.1


User provided reference genes

Program Settings