Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g015280 Pisum sativum HOM05D006818 ORTHO05D008674 2.5e-192 675.2 332 100.0
Ca_06305_v3 Cicer arietinum L. HOM05D006818 ORTHO05D008674 1.1e-160 570.1 335 86.0
Medtr5g092080 Medicago truncatula HOM05D006818 ORTHO05D008674 4.7e-151 538.1 340 79.4
Glyma.14G025600 Glycine max HOM05D006818 ORTHO05D008674 8.4e-148 527.3 331 78.5
Phvul.008G265400 Phaseolus vulgaris HOM05D006818 ORTHO05D008674 1.1e-147 526.9 335 78.8
LjContig00308g0005180 Lotus japonicus HOM05D006818 ORTHO05D008674 4.6e-146 521.5 334 78.1
Glyma.02G289400 Glycine max HOM05D006818 ORTHO05D008674 1.3e-145 520.0 331 78.2
VMungo0647G1753 Vigna mungo HOM05D006818 ORTHO05D008674 1.7e-145 519.6 335 77.9
Dinv22282 Davidia involucrata HOM05D006818 ORTHO05D008674 3.9e-137 491.9 329 75.1
Gohir.A01G077200 Gossypium hirsutum HOM05D006818 ORTHO05D008674 9.6e-136 487.3 337 73.3
Gohir.D01G064700 Gossypium hirsutum HOM05D006818 ORTHO05D008674 2.1e-135 486.1 337 73.0
Gorai.002G085600 Gossypium raimondii HOM05D006818 ORTHO05D008674 6.2e-135 484.6 336 72.9
QL08p012092 Quercus lobata HOM05D006818 ORTHO05D008674 1.4e-134 483.4 336 72.6
QL08p011921 Quercus lobata HOM05D006818 ORTHO05D008674 3.1e-134 482.3 337 71.8
Lalb_Chr04g0248591 Lupinus albus HOM05D006818 ORTHO05D008674 6.9e-134 481.1 337 73.3
COL.COLO4_09629 Corchorus olitorius HOM05D006818 ORTHO05D008674 2.0e-133 479.6 331 73.4
Manes.15G074101 Manihot esculenta HOM05D006818 ORTHO05D008674 2.0e-133 479.6 339 72.6
Thecc.07G044200 Theobroma cacao HOM05D006818 ORTHO05D008674 9.9e-133 477.2 316 75.3
ClCG05G014460 Citrullus lanatus HOM05D006818 ORTHO05D008674 4.9e-132 474.9 338 71.6
TWI39G0401 Tripterygium wilfordii HOM05D006818 ORTHO05D008674 5.4e-131 471.5 340 70.0
Duzib213G0630 Durio zibethinus HOM05D006818 ORTHO05D008674 1.2e-130 470.3 326 72.4
MELO3C018077.2 Cucumis melo HOM05D006818 ORTHO05D008674 2.7e-130 469.2 336 71.4
CANSAT25G1970 Cannabis sativa HOM05D006818 ORTHO05D008674 4.6e-130 468.4 306 73.9
CsaV3_3G023260 Cucumis sativus L. HOM05D006818 ORTHO05D008674 1.0e-129 467.2 336 70.8
TAR627G0163 Trochodendron aralioides HOM05D006818 ORTHO05D008674 5.1e-129 464.9 333 71.2
Sed0006226 Sechium edule HOM05D006818 ORTHO05D008674 8.7e-129 464.2 335 70.1
GSVIVG01001999001 Vitis vinifera HOM05D006818 ORTHO05D008674 4.3e-128 461.8 318 72.6
arahy.Tifrunner.gnm1.ann1.37S2BM Arachis hypogaea HOM05D006818 ORTHO05D008674 5.6e-128 461.5 342 71.9
arahy.Tifrunner.gnm1.ann1.D1ZW30 Arachis hypogaea HOM05D006818 ORTHO05D008674 7.4e-128 461.1 341 71.6
CSS0009238 Camellia sinensis var. sinensis HOM05D006818 ORTHO05D008674 1.6e-127 459.9 330 69.7
MD11G1222300 Malus domestica HOM05D006818 ORTHO05D008674 1.6e-127 459.9 321 72.6
Ciclev10008835m.g Citrus clementina HOM05D006818 ORTHO05D008674 2.8e-127 459.1 339 69.0
RcHm_v2.0_Chr5g0037981 Rosa chinensis HOM05D006818 ORTHO05D008674 4.8e-127 458.4 332 69.6
Prupe.4G208600 Prunus persica HOM05D006818 ORTHO05D008674 8.1e-127 457.6 314 72.0
Lj8A167T47 Lonicera japonica HOM05D006818 ORTHO05D008674 3.1e-126 455.7 329 68.7
Oeu005459.1 Olea europaea HOM05D006818 ORTHO05D008674 6.9e-126 454.5 330 68.8
PGR031G1507 Punica granatum HOM05D006818 ORTHO05D008674 6.9e-126 454.5 323 70.0
Eucgr.F03445 Eucalyptus grandis HOM05D006818 ORTHO05D008674 1.2e-125 453.8 329 67.5
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 1.5e-125 453.4 337 68.5
CiPaw.11G186900 Carya illinoinensis HOM05D006818 ORTHO05D008674 3.4e-125 452.2 338 69.5
Cpa.g.sc97.37 Carica papaya HOM05D006818 ORTHO05D008674 5.8e-125 451.4 334 69.5
FvH4_3g22121 Fragaria vesca HOM05D006818 ORTHO05D008674 3.8e-124 448.7 323 69.7
ECA236G4406 Erigeron canadensis HOM05D006818 ORTHO05D008674 1.1e-123 447.2 323 70.9
Potri.001G420800 Populus trichocarpa HOM05D006818 ORTHO05D008674 1.1e-123 447.2 342 67.0
Rhsim06G0214800 Rhododendron simsii HOM05D006818 ORTHO05D008674 1.9e-123 446.4 331 69.2
Atru.chr2.3275 Acer truncatum HOM05D006818 ORTHO05D008674 4.2e-123 445.3 322 68.9
Nitab4.5_0000653g0090 Nicotiana tabacum HOM05D006818 ORTHO05D008674 7.9e-122 441.0 327 68.2
BcaB02g10686 Brassica carinata HOM05D006818 ORTHO05D008674 1.0e-121 440.7 312 69.6
SpUn0103_0020 Schrenkiella parvula HOM05D006818 ORTHO05D008674 1.0e-121 440.7 313 69.0
MSTRG.6906 Avicennia marina HOM05D006818 ORTHO05D008674 5.1e-121 438.3 325 68.3
Nitab4.5_0000749g0100 Nicotiana tabacum HOM05D006818 ORTHO05D008674 5.1e-121 438.3 297 72.4
Aqoxy1G03627 Aquilegia oxysepala HOM05D006818 ORTHO05D008674 6.7e-121 438.0 335 67.8
Carub.0005s1401 Capsella rubella HOM05D006818 ORTHO05D008674 6.7e-121 438.0 311 69.5
Solyc12g005180.2 Solanum lycopersicum HOM05D006818 ORTHO05D008674 8.7e-121 437.6 325 67.4
Ah.06g195870 Amaranthus hybridus HOM05D006818 ORTHO05D008674 1.1e-120 437.2 309 68.6
Sc06g0005170 Simmondsia chinensis HOM05D006818 ORTHO05D008674 1.1e-120 437.2 329 65.7
BraA06t25672Z Brassica rapa HOM05D006818 ORTHO05D008674 1.5e-120 436.8 325 67.7
Sopen12g001170 Solanum pennellii HOM05D006818 ORTHO05D008674 1.5e-120 436.8 329 66.6
A06p27360 Brassica napus HOM05D006818 ORTHO05D008674 2.5e-120 436.0 325 67.1
Peaxi162Scf01097g00023 Petunia axillaris HOM05D006818 ORTHO05D008674 2.5e-120 436.0 332 66.9
Sabra16G0285700 Salix brachista HOM05D006818 ORTHO05D008674 3.3e-120 435.6 360 64.2
Migut.M01786 Erythranthe guttata HOM05D006818 ORTHO05D008674 4.3e-120 435.3 333 65.8
Cc05_g13490 Coffea canephora HOM05D006818 ORTHO05D008674 7.4e-120 434.5 323 67.8
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 9.6e-120 434.1 296 71.3
PSO210G7832 Papaver somniferum HOM05D006818 ORTHO05D008674 1.6e-119 433.3 325 67.7
BcaC01g02294 Brassica carinata HOM05D006818 ORTHO05D008674 4.8e-119 431.8 325 66.5
C03p66930 Brassica napus HOM05D006818 ORTHO05D008674 4.8e-119 431.8 325 66.5
Zm00001eb070100 Zea mays HOM05D006818 ORTHO05D008674 4.8e-119 431.8 327 66.7
BolC3t18966H Brassica oleracea HOM05D006818 ORTHO05D008674 6.2e-119 431.4 325 66.5
Thhalv10010497m.g Eutrema salsugineum HOM05D006818 ORTHO05D008674 2.4e-118 429.5 310 68.4
AL5G27200 Arabidopsis lyrata HOM05D006818 ORTHO05D008674 4.0e-118 428.7 313 67.4
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 4.0e-118 428.7 285 73.3
MBI18_g06645_MAGBIO Magnolia biondii HOM05D006818 ORTHO05D008674 5.3e-118 428.3 334 65.6
Lsat_1_v5_gn_7_109080 Lactuca sativa HOM05D006818 ORTHO05D008674 9.0e-118 427.6 323 67.5
Nn1g07100 Nelumbo nucifera HOM05D006818 ORTHO05D008674 9.0e-118 427.6 337 66.2
Hund07318 Selenicereus undatus HOM05D006818 ORTHO05D008674 2.0e-117 426.4 332 64.5
Os04g0626400 Oryza sativa ssp. japonica HOM05D006818 ORTHO05D008674 4.5e-117 425.2 335 65.1
EL10Ac4g09438 Beta vulgaris HOM05D006818 ORTHO05D008674 3.8e-116 422.2 325 64.9
PSO832G0412 Papaver somniferum HOM05D006818 ORTHO05D008674 3.8e-116 422.2 322 66.5
AT3G47860 Arabidopsis thaliana HOM05D006818 ORTHO05D008674 4.9e-116 421.8 310 67.7
CAN.G315.6 Capsicum annuum HOM05D006818 ORTHO05D008674 1.1e-115 420.6 324 65.4
CDE01G0156 Ceratophyllum demersum HOM05D006818 ORTHO05D008674 2.5e-115 419.5 308 67.2
HanXRQChr15g0494291 Helianthus annuus HOM05D006818 ORTHO05D008674 3.2e-115 419.1 325 66.8
ATR0752G046 Amborella trichopoda HOM05D006818 ORTHO05D008674 6.0e-114 414.8 272 72.4
SGA_v2.0_scaffold80G25946 Striga asiatica HOM05D006818 ORTHO05D008674 1.8e-113 413.3 333 63.7
PGSC0003DMG400001099 Solanum tuberosum HOM05D006818 ORTHO05D008674 6.7e-113 411.4 261 75.5
DCAR_022551 Daucus carota HOM05D006818 ORTHO05D008674 5.7e-112 408.3 334 63.2
QL08p012107 Quercus lobata HOM05D006818 ORTHO05D008674 2.8e-111 406.0 237 79.3
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 1.8e-110 403.3 271 72.0
Atru.BG.12.p Acer truncatum HOM05D006818 ORTHO05D008674 9.0e-110 401.0 232 82.3
TPR.G12727 Trifolium pratense HOM05D006818 ORTHO05D008674 3.4e-109 399.1 245 81.2
Aa31LG4G16540 Aethionema arabicum HOM05D006818 ORTHO05D008674 2.9e-108 396.0 313 63.3
unitig_62.g23277 Utricularia gibba HOM05D006818 ORTHO05D008674 1.0e-105 387.5 337 60.2
Actinidia05109 Actinidia chinensis HOM05D006818 ORTHO05D008674 1.5e-104 383.6 325 61.5
Sp5g14080 Schrenkiella parvula HOM05D006818 ORTHO05D008674 2.8e-103 379.4 278 67.6
MD03G1208100 Malus domestica HOM05D006818 ORTHO05D008674 4.8e-103 378.6 312 62.2
vmacro11742 Vaccinium macrocarpon HOM05D006818 ORTHO05D008674 6.3e-103 378.3 336 61.3
AUR62006731 Chenopodium quinoa HOM05D006818 ORTHO05D008674 2.4e-102 376.3 217 80.6
HPP92_009349 Vanilla planifolia HOM05D006818 ORTHO05D008674 3.1e-102 375.9 236 73.7
Mapoly0115s0028 Marchantia polymorpha HOM05D006818 ORTHO05D008674 8.2e-95 351.3 326 55.5
SMO147G0254 Selaginella moellendorffii HOM05D006818 ORTHO05D008674 1.1e-91 340.9 257 63.8
AUR62000376 Chenopodium quinoa HOM05D006818 ORTHO05D008674 1.8e-89 333.6 330 56.1
TPR.G29121 Trifolium pratense HOM05D006818 ORTHO05D008674 1.6e-85 320.5 197 80.7
Pp3c9_6110 Physcomitrium patens HOM05D006818 ORTHO05D008674 1.2e-82 310.8 322 49.4
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 1.5e-80 303.9 182 79.1
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 1.5e-80 303.9 182 79.1
SEGI_29406 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 2.8e-71 273.1 218 59.6
TPR.G29124 Trifolium pratense HOM05D006818 ORTHO05D008674 2.4e-70 270.0 150 88.0
AagrBONN_evm.TU.Sc2ySwM_228.3024 Anthoceros agrestis HOM05D006818 ORTHO05D008674 6.5e-68 261.9 189 65.1
CBR_g57971 Chara braunii HOM05D006818 ORTHO05D008674 2.8e-58 229.9 201 58.2
PRCOL_00005879 Prasinoderma coloniale HOM05D006818 ORTHO05D008674 1.9e-43 180.6 185 50.3
Glyma.14G153300 Glycine max HOM05D006818 ORTHO05D008674 1.1e-30 138.3 78 82.1
RcHm_v2.0_Chr3g0496801 Rosa chinensis HOM05D006818 ORTHO05D008674 2.1e-29 134.0 146 52.1
Ah.06g195920 Amaranthus hybridus HOM05D001023 ORTHO05D000912 4.6e-21 106.3 114 49.1
Actinidia09914 Actinidia chinensis HOM05D006818 ORTHO05D008674 5.3e-17 92.8 59 74.6
SEGI_26249 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 4.8e-10 69.7 52 61.5
Sed0001393 Sechium edule HOM05D006818 ORTHO05D372820 5.8e-08 62.8 258 27.1
Atru.chr7.159 Acer truncatum HOM05D003204 ORTHO05D003566 8.4e-07 58.9 167 30.5
MD02G1010500 Malus domestica HOM05D003204 ORTHO05D003566 1.1e-06 58.5 167 26.3
Eucgr.C04044 Eucalyptus grandis HOM05D003204 ORTHO05D003566 2.5e-06 57.4 168 27.4
Eucgr.L00627 Eucalyptus grandis HOM05D003204 ORTHO05D003566 2.5e-06 57.4 168 27.4


User provided reference genes

Program Settings