Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g060480 Pisum sativum HOM05D004689 ORTHO05D006269 1.1e-43 179.5 87 100.0
Psat1g060520 Pisum sativum HOM05D004689 ORTHO05D006269 1.1e-43 179.5 87 100.0
Ca_23152_v3 Cicer arietinum L. HOM05D004689 ORTHO05D006269 2.8e-34 148.3 71 98.6
TPR.G17360 Trifolium pratense HOM05D004689 ORTHO05D006269 4.7e-34 147.5 71 98.6
Aqoxy2G01650 Aquilegia oxysepala HOM05D004689 ORTHO05D006269 6.2e-34 147.1 71 97.2
Medtr8g009970 Medicago truncatula HOM05D004689 ORTHO05D006269 1.4e-33 146.0 71 95.8
Lj3C990G15 Lonicera japonica HOM05D004689 ORTHO05D006269 2.3e-33 145.2 71 95.8
DCAR_020804 Daucus carota HOM05D004689 ORTHO05D006269 3.1e-33 144.8 71 95.8
THA.LOC104816037 Tarenaya hassleriana HOM05D004689 ORTHO05D006269 4.0e-33 144.4 71 95.8
MSTRG.19190 Avicennia marina HOM05D004689 ORTHO05D006269 5.2e-33 144.1 71 95.8
Ciclev10012150m.g Citrus clementina HOM05D004689 ORTHO05D006269 5.2e-33 144.1 71 94.4
MD04G1088800 Malus domestica HOM05D004689 ORTHO05D006269 5.2e-33 144.1 71 94.4
MD12G1106500 Malus domestica HOM05D004689 ORTHO05D006269 5.2e-33 144.1 71 94.4
Prupe.7G125300 Prunus persica HOM05D004689 ORTHO05D006269 6.8e-33 143.7 71 94.4
CANSAT80G2663 Cannabis sativa HOM05D004689 ORTHO05D006269 1.2e-32 142.9 71 93.0
Glyma.15G005900 Glycine max HOM05D004689 ORTHO05D006269 1.2e-32 142.9 71 94.4
Lsat_1_v5_gn_1_52460 Lactuca sativa HOM05D004689 ORTHO05D006269 1.2e-32 142.9 71 94.4
Phvul.005G180000 Phaseolus vulgaris HOM05D004689 ORTHO05D006269 1.2e-32 142.9 71 94.4
VMungo0917G0001 Vigna mungo HOM05D004689 ORTHO05D006269 1.2e-32 142.9 71 94.4
arahy.Tifrunner.gnm1.ann1.0YCB9L Arachis hypogaea HOM05D004689 ORTHO05D006269 2.0e-32 142.1 71 93.0
arahy.Tifrunner.gnm1.ann1.98D3Z3 Arachis hypogaea HOM05D004689 ORTHO05D006269 2.0e-32 142.1 71 93.0
FAN02G2373 Fragaria x ananassa HOM05D004689 ORTHO05D006269 2.0e-32 142.1 71 93.0
FAN14G4883 Fragaria x ananassa HOM05D004689 ORTHO05D006269 2.0e-32 142.1 71 93.0
RcHm_v2.0_Chr3g0470901 Rosa chinensis HOM05D004689 ORTHO05D006269 2.0e-32 142.1 71 93.0
Sp4g14930 Schrenkiella parvula HOM05D004689 ORTHO05D006269 2.0e-32 142.1 71 91.5
TAR369G0565 Trochodendron aralioides HOM05D004689 ORTHO05D006269 2.0e-32 142.1 71 93.0
TAR633G1835 Trochodendron aralioides HOM05D004689 ORTHO05D006269 2.0e-32 142.1 71 93.0
ECA238G3499 Erigeron canadensis HOM05D004689 ORTHO05D006269 2.6e-32 141.7 71 93.0
Glyma.13G367400 Glycine max HOM05D004689 ORTHO05D006269 2.6e-32 141.7 71 93.0
Oeu042111.1 Olea europaea HOM05D004689 ORTHO05D006269 2.6e-32 141.7 71 93.0
PGR119G0162 Punica granatum HOM05D004689 ORTHO05D006269 2.6e-32 141.7 71 93.0
CARHR126450 Cardamine hirsuta HOM05D004689 ORTHO05D006269 3.4e-32 141.4 71 91.5
Eucgr.K02436 Eucalyptus grandis HOM05D004689 ORTHO05D006269 3.4e-32 141.4 71 93.0
Aa31LG5G4730 Aethionema arabicum HOM05D004689 ORTHO05D006269 4.4e-32 141.0 71 91.5
EL10Ac7g16690 Beta vulgaris HOM05D004689 ORTHO05D006269 4.4e-32 141.0 71 93.0
CAN.G1038.16 Capsicum annuum HOM05D004689 ORTHO05D006269 4.4e-32 141.0 71 93.0
AUR62026953 Chenopodium quinoa HOM05D004689 ORTHO05D006269 4.4e-32 141.0 71 93.0
Migut.J00456 Erythranthe guttata HOM05D004689 ORTHO05D006269 4.4e-32 141.0 71 93.0
Lj3g0015942 Lotus japonicus HOM05D004689 ORTHO05D006269 4.4e-32 141.0 71 93.0
Solyc09g008470.4 Solanum lycopersicum HOM05D004689 ORTHO05D006269 4.4e-32 141.0 71 93.0
Sopen09g003300 Solanum pennellii HOM05D004689 ORTHO05D006269 4.4e-32 141.0 71 93.0
PGSC0003DMG400003874 Solanum tuberosum HOM05D004689 ORTHO05D006269 4.4e-32 141.0 71 93.0
TWI74G0641 Tripterygium wilfordii HOM05D004689 ORTHO05D006269 4.4e-32 141.0 71 91.5
CiPaw.10G001700 Carya illinoinensis HOM05D004689 ORTHO05D006269 5.8e-32 140.6 71 91.5
Cc06_g04560 Coffea canephora HOM05D004689 ORTHO05D006269 5.8e-32 140.6 71 93.0
COL.COLO4_26909 Corchorus olitorius HOM05D004689 ORTHO05D006269 5.8e-32 140.6 71 91.5
CsaV3_3G036230 Cucumis sativus L. HOM05D004689 ORTHO05D006269 5.8e-32 140.6 71 91.5
Duzib128G1555 Durio zibethinus HOM05D004689 ORTHO05D006269 5.8e-32 140.6 71 91.5
Gohir.A09G144600 Gossypium hirsutum HOM05D004689 ORTHO05D006269 5.8e-32 140.6 71 91.5
Gohir.D09G140400 Gossypium hirsutum HOM05D004689 ORTHO05D006269 5.8e-32 140.6 71 91.5
Gorai.006G161000 Gossypium raimondii HOM05D004689 ORTHO05D006269 5.8e-32 140.6 71 91.5
PSO541G4270 Papaver somniferum HOM05D004689 ORTHO05D006269 5.8e-32 140.6 71 93.0
PSO675G8307 Papaver somniferum HOM05D004689 ORTHO05D006269 5.8e-32 140.6 71 93.0
QL03p020097 Quercus lobata HOM05D004689 ORTHO05D006269 5.8e-32 140.6 71 91.5
Sed0022535 Sechium edule HOM05D004689 ORTHO05D006269 5.8e-32 140.6 71 91.5
Thecc.05G071600 Theobroma cacao HOM05D004689 ORTHO05D006269 5.8e-32 140.6 71 91.5
Thecc.05G071900 Theobroma cacao HOM05D004689 ORTHO05D006269 5.8e-32 140.6 71 91.5
GSVIVG01033687001 Vitis vinifera HOM05D004689 ORTHO05D006269 5.8e-32 140.6 71 91.5
Actinidia32476 Actinidia chinensis HOM05D004689 ORTHO05D006269 7.5e-32 140.2 71 93.0
Lalb_Chr04g0254861 Lupinus albus HOM05D004689 ORTHO05D006269 7.5e-32 140.2 71 91.5
Nitab4.5_0003314g0100 Nicotiana tabacum HOM05D004689 ORTHO05D006269 7.5e-32 140.2 71 93.0
HPP92_017214 Vanilla planifolia HOM05D004689 ORTHO05D006269 7.5e-32 140.2 71 93.0
Ah.08g211440 Amaranthus hybridus HOM05D004689 ORTHO05D006269 9.8e-32 139.8 71 91.5
Ah.15g091430 Amaranthus hybridus HOM05D004689 ORTHO05D006269 9.8e-32 139.8 71 91.5
HanXRQChr13g0402661 Helianthus annuus HOM05D004689 ORTHO05D006269 9.8e-32 139.8 71 93.0
Mapoly0069s0004 Marchantia polymorpha HOM05D004689 ORTHO05D006269 9.8e-32 139.8 71 93.0
Pp3c15_8160 Physcomitrium patens HOM05D004689 ORTHO05D006269 9.8e-32 139.8 71 93.0
Pp3c9_13030 Physcomitrium patens HOM05D004689 ORTHO05D006269 9.8e-32 139.8 71 93.0
Cfa021476 Carpinus fangiana HOM05D004689 ORTHO05D006269 1.7e-31 139.0 71 90.1
Nn6g35217 Nelumbo nucifera HOM05D004689 ORTHO05D006269 1.7e-31 139.0 71 91.5
Potri.006G121300 Populus trichocarpa HOM05D004689 ORTHO05D006269 1.7e-31 139.0 71 91.5
Potri.016G097600 Populus trichocarpa HOM05D004689 ORTHO05D006269 1.7e-31 139.0 71 91.5
Psat1g060440 Pisum sativum HOM05D004689 ORTHO05D006269 2.2e-31 138.7 74 91.9
CSS0004382 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 2.9e-31 138.3 71 91.5
CSS0024828 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 2.9e-31 138.3 71 91.5
SGA_v2.0_scaffold40G15470 Striga asiatica HOM05D004689 ORTHO05D006269 2.9e-31 138.3 71 91.5
Dinv37340 Davidia involucrata HOM05D004689 ORTHO05D006269 3.7e-31 137.9 71 91.5
Hma1.2p1_0225F.1_g095000 Hydrangea macrophylla HOM05D004689 ORTHO05D006269 3.7e-31 137.9 71 91.5
A05p13300 Brassica napus HOM05D004689 ORTHO05D006269 4.9e-31 137.5 71 88.7
C04p17070 Brassica napus HOM05D004689 ORTHO05D006269 4.9e-31 137.5 71 88.7
BolC4t23259H Brassica oleracea HOM05D004689 ORTHO05D006269 4.9e-31 137.5 71 88.7
BraA05t20271Z Brassica rapa HOM05D004689 ORTHO05D006269 4.9e-31 137.5 71 88.7
AagrBONN_evm.TU.Sc2ySwM_344.3364 Anthoceros agrestis HOM05D004689 ORTHO05D006269 6.4e-31 137.1 71 91.5
AagrBONN_evm.TU.Sc2ySwM_344.454 Anthoceros agrestis HOM05D004689 ORTHO05D006269 6.4e-31 137.1 71 91.5
Lalb_Chr10g0099851 Lupinus albus HOM05D004689 ORTHO05D006269 6.4e-31 137.1 71 88.7
unitig_26.g9238 Utricularia gibba HOM05D004689 ORTHO05D006269 6.4e-31 137.1 71 91.5
CDE03G0163 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 8.3e-31 136.7 71 90.1
Peaxi162Scf00407g00631 Petunia axillaris HOM05D004689 ORTHO05D006269 1.1e-30 136.3 71 90.1
Zm00001eb011590 Zea mays HOM05D004689 ORTHO05D006269 1.1e-30 136.3 71 91.5
Zm00001eb398100 Zea mays HOM05D004689 ORTHO05D006269 1.1e-30 136.3 71 91.5
SMO228G0117 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 1.4e-30 136.0 71 91.5
AL4G28000 Arabidopsis lyrata HOM05D004689 ORTHO05D006269 2.4e-30 135.2 71 88.7
AT2G32600 Arabidopsis thaliana HOM05D004689 ORTHO05D006269 2.4e-30 135.2 71 88.7
Hund19382 Selenicereus undatus HOM05D004689 ORTHO05D006269 2.4e-30 135.2 71 90.1
Sc20g0005690 Simmondsia chinensis HOM05D004689 ORTHO05D006269 2.4e-30 135.2 71 90.1
Os03g0263500 Oryza sativa ssp. japonica HOM05D004689 ORTHO05D006269 3.2e-30 134.8 71 90.1
FAN05G0091 Fragaria x ananassa HOM05D004689 ORTHO05D006269 4.1e-30 134.4 80 82.5
FAN05G3347 Fragaria x ananassa HOM05D004689 ORTHO05D006269 4.1e-30 134.4 80 82.5
RcHm_v2.0_Chr7g0191101 Rosa chinensis HOM05D004689 ORTHO05D006269 4.1e-30 134.4 71 88.7
Atru.chr8.1747 Acer truncatum HOM05D004689 ORTHO05D006269 5.4e-30 134.0 81 81.5
CDE06G0795 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 5.4e-30 134.0 71 88.7
CBR_g54837 Chara braunii HOM05D004689 ORTHO05D006269 7.0e-30 133.7 71 88.7
FAN09G4523 Fragaria x ananassa HOM05D004689 ORTHO05D006269 9.2e-30 133.3 83 79.5
Thhalv10017051m.g Eutrema salsugineum HOM05D004689 ORTHO05D006269 1.6e-29 132.5 71 87.3
Carub.0004s1393 Capsella rubella HOM05D004689 ORTHO05D006269 2.1e-29 132.1 71 87.3
MELO3C009381.2 Cucumis melo HOM05D004689 ORTHO05D006269 4.6e-29 131.0 80 80.0
MBI17_g39322_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 1.9e-27 125.6 63 93.7
VMungo0219G0001 Vigna mungo HOM05D004689 ORTHO05D006269 1.9e-27 125.6 63 93.7
ClCG10G019870 Citrullus lanatus HOM05D004689 ORTHO05D006269 1.2e-26 122.9 66 89.4
Sabra06G0095500 Salix brachista HOM05D004689 ORTHO05D006269 1.2e-26 122.9 65 89.2
ATR0118G008 Amborella trichopoda HOM05D004689 ORTHO05D006269 4.7e-26 120.9 64 89.1
BcaB02g10459 Brassica carinata HOM05D004689 ORTHO05D006269 8.1e-26 120.2 63 87.3
Haze_26764 Corylus avellana HOM05D004689 ORTHO05D006269 8.1e-26 120.2 71 80.3
TAR636G1083 Trochodendron aralioides HOM05D004689 ORTHO05D006269 8.1e-26 120.2 76 78.9
SHI12393 Sapria himalayana HOM05D004689 ORTHO05D006269 1.1e-25 119.8 69 84.1
RhsimUnG0004400 Rhododendron simsii HOM05D004689 ORTHO05D006269 1.4e-25 119.4 74 82.4
RhsimUnG0067800 Rhododendron simsii HOM05D004689 ORTHO05D006269 1.4e-25 119.4 74 82.4
Nitab4.5_0000349g0010 Nicotiana tabacum HOM05D004689 ORTHO05D006269 1.2e-24 116.3 62 88.7
Carub.0007s3257 Capsella rubella HOM05D004689 ORTHO05D006269 9.9e-24 113.2 73 74.0
vmacro08797 Vaccinium macrocarpon HOM05D004689 ORTHO05D006269 4.9e-23 110.9 76 75.0
Cre06.g252700 Chlamydomonas reinhardtii HOM05D004689 ORTHO05D006269 6.4e-23 110.5 71 76.1
MCO12G316 Micromonas commoda HOM05D004689 ORTHO05D006269 9.2e-22 106.7 72 75.0
Prupe.4G071900 Prunus persica HOM05D004689 ORTHO05D006269 1.2e-21 106.3 77 70.1
PRCOL_00004335 Prasinoderma coloniale HOM05D004689 ORTHO05D006269 3.9e-20 101.3 74 64.9
Cc00_g35330 Coffea canephora HOM05D004689 ORTHO05D006269 8.6e-20 100.1 51 90.2
SMO031G0002 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 1.5e-19 99.4 48 95.8
Cc00_g23430 Coffea canephora HOM05D004689 ORTHO05D006269 3.3e-19 98.2 51 88.2
Manes.09G064318 Manihot esculenta HOM05D004689 ORTHO05D006269 8.1e-18 93.6 51 86.3
Psat6g037120 Pisum sativum HOM05D005082 ORTHO05D006474 3.8e-15 84.7 57 78.9
FvH4_6g16880 Fragaria vesca HOM05D004689 ORTHO05D006269 1.9e-14 82.4 59 71.2
Psat4g215720 Pisum sativum HOM05D002324 ORTHO05D002380 3.5e-13 78.2 50 84.0
Dinv35815 Davidia involucrata HOM05D004689 ORTHO05D006269 5.3e-09 64.3 34 88.2


User provided reference genes

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