Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g035320 Pisum sativum HOM05D005401 ORTHO05D006582 3.8e-48 194.5 97 100.0
Psat7g085120 Pisum sativum HOM05D005401 ORTHO05D006582 1.3e-21 106.3 73 78.1
Psat7g046640 Pisum sativum HOM05D005401 ORTHO05D006582 3.9e-21 104.8 54 96.3
Lalb_Chr12g0203191 Lupinus albus HOM05D005401 ORTHO05D006582 5.1e-21 104.4 55 92.7
Ca_17644_v3 Cicer arietinum L. HOM05D005401 ORTHO05D006582 4.3e-20 101.3 55 87.3
Glyma.08G156200 Glycine max HOM05D005401 ORTHO05D006582 1.3e-19 99.8 55 89.1
Psat4g107600 Pisum sativum HOM05D005401 ORTHO05D006582 1.6e-19 99.4 71 74.6
Medtr8g093540 Medicago truncatula HOM05D005401 ORTHO05D006582 2.1e-19 99.0 54 88.9
Glyma.05G190800 Glycine max HOM05D005401 ORTHO05D006582 4.8e-19 97.8 55 87.3
Lj4g0023934 Lotus japonicus HOM05D005401 ORTHO05D006582 2.6e-17 92.0 54 81.5
Lalb_Chr13g0296571 Lupinus albus HOM05D005401 ORTHO05D006582 3.4e-17 91.7 54 87.0
Phvul.002G271200 Phaseolus vulgaris HOM05D005401 ORTHO05D006582 4.5e-17 91.3 54 83.3
arahy.Tifrunner.gnm1.ann1.LMDE4E Arachis hypogaea HOM05D005401 ORTHO05D006582 6.5e-16 87.4 54 77.8
arahy.Tifrunner.gnm1.ann1.N6RYVU Arachis hypogaea HOM05D005401 ORTHO05D006582 6.5e-16 87.4 54 77.8
Ciclev10000834m.g Citrus clementina HOM05D005401 ORTHO05D006582 3.2e-15 85.1 55 74.5
COL.COLO4_14025 Corchorus olitorius HOM05D005401 ORTHO05D006582 5.5e-15 84.3 74 59.5
VMungo0251G3661 Vigna mungo HOM05D005401 ORTHO05D006582 1.6e-14 82.8 54 74.1
FvH4_1g24150 Fragaria vesca HOM05D005401 ORTHO05D006582 2.1e-14 82.4 53 66.0
RcHm_v2.0_Chr2g0120381 Rosa chinensis HOM05D005401 ORTHO05D006582 2.7e-14 82.0 53 66.0
Gohir.D11G230200 Gossypium hirsutum HOM05D005401 ORTHO05D006582 3.5e-14 81.6 55 63.6
Gorai.003G067300 Gossypium raimondii HOM05D005401 ORTHO05D006582 3.5e-14 81.6 55 63.6
CiPaw.03G129100 Carya illinoinensis HOM05D005401 ORTHO05D006582 6.0e-14 80.9 55 69.1
Duzib147G0934 Durio zibethinus HOM05D005401 ORTHO05D006582 6.0e-14 80.9 55 65.5
Nn1g06207 Nelumbo nucifera HOM05D005401 ORTHO05D006582 1.0e-13 80.1 55 69.1
Lalb_Chr00c34g0408611 Lupinus albus HOM05D005401 ORTHO05D006582 1.8e-13 79.3 46 87.0
PSO017G4890 Papaver somniferum HOM05D005401 ORTHO05D006582 3.0e-13 78.6 55 67.3
AUR62003599 Chenopodium quinoa HOM05D005401 ORTHO05D006582 3.9e-13 78.2 55 67.3
Gohir.A11G226902 Gossypium hirsutum HOM05D005401 ORTHO05D006582 3.9e-13 78.2 55 61.8
Hma1.2p1_0528F.1_g173030 Hydrangea macrophylla HOM05D005401 ORTHO05D006582 3.9e-13 78.2 74 56.8
AUR62017910 Chenopodium quinoa HOM05D005401 ORTHO05D006582 5.1e-13 77.8 55 67.3
AUR62043710 Chenopodium quinoa HOM05D005401 ORTHO05D006582 5.1e-13 77.8 55 67.3
Thecc.01G128200 Theobroma cacao HOM05D005401 ORTHO05D006582 5.1e-13 77.8 55 65.5
Dinv03731 Davidia involucrata HOM05D005401 ORTHO05D006582 6.7e-13 77.4 74 58.1
Gohir.A11G221000 Gossypium hirsutum HOM05D005401 ORTHO05D006582 6.7e-13 77.4 55 63.6
Prupe.6G159400 Prunus persica HOM05D005401 ORTHO05D006582 6.7e-13 77.4 55 63.6
PSO170G5022 Papaver somniferum HOM05D005401 ORTHO05D006582 8.7e-13 77.0 54 66.7
Psat7g237960 Pisum sativum HOM05D005401 ORTHO05D006582 8.7e-13 77.0 55 74.5
TWI79G0453 Tripterygium wilfordii HOM05D005401 ORTHO05D006582 8.7e-13 77.0 54 68.5
Eucgr.H04948 Eucalyptus grandis HOM05D005401 ORTHO05D006582 1.1e-12 76.6 55 65.5
Potri.007G108200 Populus trichocarpa HOM05D005401 ORTHO05D006582 1.1e-12 76.6 55 69.1
QL06p029214 Quercus lobata HOM05D005401 ORTHO05D006582 1.1e-12 76.6 74 58.1
GSVIVG01026512001 Vitis vinifera HOM05D005401 ORTHO05D006582 1.5e-12 76.3 55 65.5
Aa31LG1G17320 Aethionema arabicum HOM05D005401 ORTHO05D006582 1.9e-12 75.9 74 55.4
Cfa002819 Carpinus fangiana HOM05D005401 ORTHO05D006582 2.5e-12 75.5 69 58.0
Haze_25113 Corylus avellana HOM05D005401 ORTHO05D006582 2.5e-12 75.5 69 58.0
Thhalv10004101m.g Eutrema salsugineum HOM05D005401 ORTHO05D006582 2.5e-12 75.5 54 63.0
MD01G1002400 Malus domestica HOM05D005401 ORTHO05D006582 2.5e-12 75.5 55 60.0
Sed0020894 Sechium edule HOM05D005401 ORTHO05D006582 2.5e-12 75.5 55 70.9
AL8G42040 Arabidopsis lyrata HOM05D005401 ORTHO05D006582 3.3e-12 75.1 54 63.0
AT5G64630 Arabidopsis thaliana HOM05D005401 ORTHO05D006582 3.3e-12 75.1 54 63.0
BcaB02g09807 Brassica carinata HOM05D005401 ORTHO05D006582 3.3e-12 75.1 54 63.0
CARHR278600 Cardamine hirsuta HOM05D005401 ORTHO05D006582 3.3e-12 75.1 73 49.3
Dinv24333 Davidia involucrata HOM05D005401 ORTHO05D006582 3.3e-12 75.1 55 67.3
THA.LOC104799501 Tarenaya hassleriana HOM05D005401 ORTHO05D006582 3.3e-12 75.1 54 63.0
Aqoxy5G02178 Aquilegia oxysepala HOM05D005401 ORTHO05D006582 4.3e-12 74.7 94 47.9
MSTRG.23445 Avicennia marina HOM05D005401 ORTHO05D006582 7.4e-12 73.9 75 49.3
Sp2g27690 Schrenkiella parvula HOM05D005401 ORTHO05D006582 9.7e-12 73.6 54 63.0
Sc16g0003880 Simmondsia chinensis HOM05D005401 ORTHO05D006582 1.3e-11 73.2 55 61.8
Actinidia06639 Actinidia chinensis HOM05D005401 ORTHO05D006582 1.6e-11 72.8 55 63.6
PGR102G1978 Punica granatum HOM05D005401 ORTHO05D006582 1.6e-11 72.8 55 60.0
Rhsim10G0136100 Rhododendron simsii HOM05D005401 ORTHO05D006582 1.6e-11 72.8 55 65.5
RhsimUnG0132800 Rhododendron simsii HOM05D005401 ORTHO05D006582 1.6e-11 72.8 55 65.5
TAR628G0360 Trochodendron aralioides HOM05D005401 ORTHO05D006582 1.6e-11 72.8 54 61.1
Actinidia20088 Actinidia chinensis HOM05D005401 ORTHO05D006582 2.2e-11 72.4 72 55.6
Carub.0008s2542 Capsella rubella HOM05D005401 ORTHO05D006582 2.8e-11 72.0 54 61.1
Manes.13G082700 Manihot esculenta HOM05D005401 ORTHO05D006582 2.8e-11 72.0 55 63.6
vmacro12864 Vaccinium macrocarpon HOM05D005401 ORTHO05D006582 2.8e-11 72.0 74 54.1
CsaV3_6G041720 Cucumis sativus L. HOM05D005401 ORTHO05D006582 3.7e-11 71.6 55 69.1
CANSAT01G1454 Cannabis sativa HOM05D005401 ORTHO05D006582 4.8e-11 71.2 72 52.8
HPP92_001165 Vanilla planifolia HOM05D005401 ORTHO05D006582 4.8e-11 71.2 55 58.2
HPP92_001192 Vanilla planifolia HOM05D005401 ORTHO05D006582 4.8e-11 71.2 55 58.2
HanXRQChr04g0116521 Helianthus annuus HOM05D005401 ORTHO05D006582 8.2e-11 70.5 50 68.0
Sopen11g001760 Solanum pennellii HOM05D005401 ORTHO05D006582 8.2e-11 70.5 55 56.4
DCAR_001363 Daucus carota HOM05D005401 ORTHO05D006582 1.1e-10 70.1 55 60.0
ATR1136G147 Amborella trichopoda HOM05D005401 ORTHO05D006582 1.4e-10 69.7 55 60.0
BcaC01g02694 Brassica carinata HOM05D005401 ORTHO05D006582 1.4e-10 69.7 55 61.8
C03p61560 Brassica napus HOM05D005401 ORTHO05D006582 1.4e-10 69.7 55 61.8
BolC3t18416H Brassica oleracea HOM05D005401 ORTHO05D006582 1.4e-10 69.7 55 61.8
CSS0027531 Camellia sinensis var. sinensis HOM05D005401 ORTHO05D006582 1.4e-10 69.7 74 51.4
MELO3C008048.2 Cucumis melo HOM05D005401 ORTHO05D006582 1.4e-10 69.7 48 75.0
Ah.02g121770 Amaranthus hybridus HOM05D005401 ORTHO05D006582 1.8e-10 69.3 54 59.3
A06p31360 Brassica napus HOM05D005401 ORTHO05D006582 1.8e-10 69.3 55 60.0
BraA06t26078Z Brassica rapa HOM05D005401 ORTHO05D006582 1.8e-10 69.3 55 60.0
Migut.H00736 Erythranthe guttata HOM05D005401 ORTHO05D006582 1.8e-10 69.3 55 63.6
Lsat_1_v5_gn_7_27421 Lactuca sativa HOM05D005401 ORTHO05D006582 3.1e-10 68.6 57 63.2
ECA236G1881 Erigeron canadensis HOM05D005401 ORTHO05D006582 4.1e-10 68.2 50 62.0
Oeu024886.1 Olea europaea HOM05D005401 ORTHO05D006582 4.1e-10 68.2 75 53.3
Cc07_g18120 Coffea canephora HOM05D005401 ORTHO05D006582 5.3e-10 67.8 55 61.8
Os08g0108200 Oryza sativa ssp. japonica HOM05D005401 ORTHO05D006582 5.3e-10 67.8 47 63.8
Solyc11g005800.2 Solanum lycopersicum HOM05D005401 ORTHO05D006582 5.3e-10 67.8 75 44.0
Cc00_g25980 Coffea canephora HOM05D005401 ORTHO05D006582 1.5e-09 66.2 55 60.0
Zm00001eb260310 Zea mays HOM05D005401 ORTHO05D006582 1.5e-09 66.2 47 61.7
Cc06_g17330 Coffea canephora HOM05D005401 ORTHO05D006582 2.6e-09 65.5 54 61.1
SEGI_17010 Sequoiadendron giganteum HOM05D005401 ORTHO05D006582 4.5e-09 64.7 58 51.7
PGSC0003DMG400028676 Solanum tuberosum HOM05D005401 ORTHO05D006582 5.9e-09 64.3 61 52.5
CBR_g20440 Chara braunii HOM05D005401 ORTHO05D006582 3.8e-08 61.6 47 61.7
Sabra07G0088600 Salix brachista HOM05D005401 ORTHO05D006582 1.1e-07 60.1 60 55.0
AagrBONN_evm.TU.Sc2ySwM_117.3371 Anthoceros agrestis HOM05D005401 ORTHO05D006582 1.9e-07 59.3 51 52.9
Pp3c1_14660 Physcomitrium patens HOM05D005401 ORTHO05D006582 3.2e-07 58.5 50 52.0
Pp3c1_14663 Physcomitrium patens HOM05D005401 ORTHO05D006582 3.2e-07 58.5 50 52.0
TPR.G8435 Trifolium pratense HOM05D005401 ORTHO05D006582 2.1e-06 55.8 28 89.3


User provided reference genes

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