Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s3149g0040 Pisum sativum HOM05D006356 ORTHO05D007903 1.9e-147 525.8 261 100.0
Psat0s3149g0080 Pisum sativum HOM05D006356 ORTHO05D007903 1.7e-135 486.1 279 89.2
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 1.9e-118 429.5 287 78.7
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 2.2e-103 379.4 241 81.3
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 6.3e-90 334.7 208 81.2
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 8.2e-90 334.3 208 81.2
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 3.1e-89 332.4 208 81.2
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 2.6e-80 302.8 240 64.6
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 7.2e-78 294.7 208 69.7
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 3.9e-76 288.9 231 63.2
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 1.1e-73 280.8 237 61.2
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 9.1e-73 277.7 208 67.3
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 5.5e-70 268.5 208 64.9
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 1.9e-62 243.4 232 55.2
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 1.9e-62 243.4 232 55.2
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 2.5e-62 243.0 233 54.5
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 5.5e-62 241.9 233 53.6
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 1.6e-61 240.4 231 53.2
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 2.1e-61 240.0 237 50.6
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 1.0e-60 237.7 233 53.6
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 1.0e-60 237.7 233 53.6
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 1.4e-60 237.3 233 52.8
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 1.4e-60 237.3 233 54.1
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 5.2e-60 235.3 200 60.0
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 6.7e-60 235.0 231 52.4
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 1.1e-59 234.2 233 53.2
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 7.5e-59 231.5 233 52.8
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 1.3e-58 230.7 234 52.6
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 1.3e-58 230.7 234 53.0
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 1.7e-58 230.3 233 51.5
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 2.8e-58 229.6 233 53.2
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 8.2e-58 228.0 233 51.9
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 1.1e-57 227.6 204 58.3
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 1.1e-57 227.6 233 50.6
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 2.4e-57 226.5 203 57.1
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 4.1e-57 225.7 233 51.1
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 7.0e-57 224.9 239 52.3
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 2.0e-56 223.4 207 57.0
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 2.7e-56 223.0 201 58.7
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 4.5e-56 222.2 198 58.6
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 7.7e-56 221.5 233 50.2
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 1.3e-55 220.7 234 50.9
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 2.2e-55 219.9 233 49.8
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 5.0e-55 218.8 231 50.6
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 1.1e-54 217.6 233 49.8
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 2.5e-54 216.5 239 48.5
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 3.2e-54 216.1 238 47.9
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 3.0e-52 209.5 231 49.4
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 8.8e-52 208.0 211 52.1
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 2.2e-50 203.4 234 46.6
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 1.4e-49 200.7 202 52.5
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 7.0e-49 198.4 234 47.9
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 9.1e-49 198.0 209 48.8
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 4.5e-48 195.7 205 50.2
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 4.7e-45 185.7 147 60.5
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 6.1e-45 185.3 239 44.4
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 1.8e-44 183.7 238 44.5
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 1.5e-43 180.6 212 50.0
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 2.0e-43 180.3 238 44.1
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 7.5e-43 178.3 198 48.0
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 9.8e-43 177.9 238 42.0
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 9.8e-43 177.9 237 42.6
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 3.7e-42 176.0 251 41.4
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 3.7e-42 176.0 235 43.0
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 4.9e-42 175.6 219 48.9
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 4.9e-42 175.6 234 41.5
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 6.3e-42 175.3 235 42.6
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 6.3e-42 175.3 238 42.4
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 4.1e-41 172.6 236 43.2
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 7.0e-41 171.8 237 40.9
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 1.6e-40 170.6 203 46.8
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 2.0e-40 170.2 238 40.8
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 2.7e-40 169.9 239 41.4
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 1.0e-39 167.9 235 42.1
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 2.9e-39 166.4 198 45.5
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 2.9e-39 166.4 236 39.8
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 3.8e-39 166.0 219 42.5
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 8.6e-39 164.9 234 39.3
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 1.9e-38 163.7 235 41.7
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 7.3e-38 161.8 201 44.8
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 2.8e-37 159.8 206 42.2
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 2.8e-37 159.8 215 45.6
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 2.6e-35 153.3 208 41.8
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 4.4e-35 152.5 234 37.2
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 4.4e-35 152.5 233 37.8
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 4.4e-35 152.5 234 37.2
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 5.7e-35 152.1 212 40.1
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 1.3e-34 151.0 206 41.7
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 1.4e-33 147.5 234 36.8
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 1.4e-33 147.5 206 40.8
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 1.8e-33 147.1 213 39.4
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 1.8e-33 147.1 206 40.3
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 4.1e-33 146.0 127 55.1
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 5.4e-33 145.6 239 38.9
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 9.2e-33 144.8 206 39.3
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 2.1e-29 133.7 233 36.9
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 3.6e-29 132.9 218 39.4
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 4.0e-28 129.4 234 35.5
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 1.5e-27 127.5 213 36.2
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 5.8e-27 125.6 198 41.4
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 2.2e-26 123.6 197 34.0
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 9.5e-22 108.2 175 36.6
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 6.4e-18 95.5 218 32.1
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 4.3e-14 82.8 172 33.7
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 5.8e-11 72.4 39 92.3
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 1.1e-09 68.2 39 87.2
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 6.0e-08 62.4 237 26.2
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 2.3e-07 60.5 46 60.9


User provided reference genes

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