Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s2549g0120 Pisum sativum HOM05D004689 ORTHO05D006269 1.1e-43 179.5 85 100.0
Psat1g060440 Pisum sativum HOM05D004689 ORTHO05D006269 4.6e-42 174.1 84 97.6
Psat6g037120 Pisum sativum HOM05D005082 ORTHO05D006474 1.2e-37 159.5 78 96.2
TPR.G17360 Trifolium pratense HOM05D004689 ORTHO05D006269 5.8e-37 157.1 83 90.4
Medtr8g009970 Medicago truncatula HOM05D004689 ORTHO05D006269 7.6e-37 156.8 83 89.2
Ca_23152_v3 Cicer arietinum L. HOM05D004689 ORTHO05D006269 1.7e-36 155.6 83 89.2
VMungo0917G0001 Vigna mungo HOM05D004689 ORTHO05D006269 6.4e-36 153.7 83 88.0
Phvul.005G180000 Phaseolus vulgaris HOM05D004689 ORTHO05D006269 8.4e-36 153.3 83 86.7
arahy.Tifrunner.gnm1.ann1.0YCB9L Arachis hypogaea HOM05D004689 ORTHO05D006269 2.4e-35 151.8 83 86.7
arahy.Tifrunner.gnm1.ann1.98D3Z3 Arachis hypogaea HOM05D004689 ORTHO05D006269 2.4e-35 151.8 83 86.7
Lj3g0015942 Lotus japonicus HOM05D004689 ORTHO05D006269 2.4e-35 151.8 83 86.7
ClCG10G019870 Citrullus lanatus HOM05D004689 ORTHO05D006269 3.2e-35 151.4 74 95.9
MELO3C009381.2 Cucumis melo HOM05D004689 ORTHO05D006269 3.2e-35 151.4 74 95.9
CsaV3_3G036230 Cucumis sativus L. HOM05D004689 ORTHO05D006269 3.2e-35 151.4 74 95.9
CANSAT80G2663 Cannabis sativa HOM05D004689 ORTHO05D006269 5.4e-35 150.6 83 86.7
FvH4_6g16880 Fragaria vesca HOM05D004689 ORTHO05D006269 7.1e-35 150.2 83 85.5
FAN02G2373 Fragaria x ananassa HOM05D004689 ORTHO05D006269 7.1e-35 150.2 83 85.5
FAN05G0091 Fragaria x ananassa HOM05D004689 ORTHO05D006269 7.1e-35 150.2 83 85.5
FAN05G3347 Fragaria x ananassa HOM05D004689 ORTHO05D006269 7.1e-35 150.2 83 85.5
FAN09G4523 Fragaria x ananassa HOM05D004689 ORTHO05D006269 7.1e-35 150.2 83 85.5
FAN14G4883 Fragaria x ananassa HOM05D004689 ORTHO05D006269 7.1e-35 150.2 83 85.5
PGR119G0162 Punica granatum HOM05D004689 ORTHO05D006269 7.1e-35 150.2 83 84.3
RcHm_v2.0_Chr3g0470901 Rosa chinensis HOM05D004689 ORTHO05D006269 7.1e-35 150.2 83 85.5
Eucgr.K02436 Eucalyptus grandis HOM05D004689 ORTHO05D006269 9.3e-35 149.8 74 93.2
Lalb_Chr04g0254861 Lupinus albus HOM05D004689 ORTHO05D006269 9.3e-35 149.8 83 84.3
Lalb_Chr10g0099851 Lupinus albus HOM05D004689 ORTHO05D006269 9.3e-35 149.8 83 84.3
unitig_26.g9238 Utricularia gibba HOM05D004689 ORTHO05D006269 1.2e-34 149.4 83 84.3
Haze_19437 Corylus avellana HOM05D004689 ORTHO05D006269 1.6e-34 149.1 83 83.1
ECA238G3499 Erigeron canadensis HOM05D004689 ORTHO05D006269 1.6e-34 149.1 83 84.3
Glyma.13G367400 Glycine max HOM05D004689 ORTHO05D006269 1.6e-34 149.1 83 84.3
Glyma.15G005900 Glycine max HOM05D004689 ORTHO05D006269 1.6e-34 149.1 83 84.3
GSVIVG01033687001 Vitis vinifera HOM05D004689 ORTHO05D006269 1.6e-34 149.1 83 85.5
Atru.chr8.1747 Acer truncatum HOM05D004689 ORTHO05D006269 2.1e-34 148.7 83 83.1
HanXRQChr13g0402661 Helianthus annuus HOM05D004689 ORTHO05D006269 2.1e-34 148.7 83 83.1
Sed0022535 Sechium edule HOM05D004689 ORTHO05D006269 2.7e-34 148.3 74 94.6
TAR369G0565 Trochodendron aralioides HOM05D004689 ORTHO05D006269 2.7e-34 148.3 83 83.1
TAR633G1835 Trochodendron aralioides HOM05D004689 ORTHO05D006269 2.7e-34 148.3 83 83.1
Cfa021476 Carpinus fangiana HOM05D004689 ORTHO05D006269 3.5e-34 147.9 83 81.9
Ciclev10012150m.g Citrus clementina HOM05D004689 ORTHO05D006269 3.5e-34 147.9 74 91.9
QL03p020097 Quercus lobata HOM05D004689 ORTHO05D006269 3.5e-34 147.9 83 83.1
TWI74G0641 Tripterygium wilfordii HOM05D004689 ORTHO05D006269 3.5e-34 147.9 83 85.5
Aqoxy2G01650 Aquilegia oxysepala HOM05D004689 ORTHO05D006269 7.9e-34 146.7 83 84.3
MSTRG.19190 Avicennia marina HOM05D004689 ORTHO05D006269 1.0e-33 146.4 83 81.9
Migut.J00456 Erythranthe guttata HOM05D004689 ORTHO05D006269 1.0e-33 146.4 83 81.9
Nitab4.5_0002373g0090 Nicotiana tabacum HOM05D004689 ORTHO05D006269 1.0e-33 146.4 84 81.0
RhsimUnG0004400 Rhododendron simsii HOM05D004689 ORTHO05D006269 1.0e-33 146.4 83 84.3
RhsimUnG0067800 Rhododendron simsii HOM05D004689 ORTHO05D006269 1.0e-33 146.4 83 84.3
AL4G28000 Arabidopsis lyrata HOM05D004689 ORTHO05D006269 1.3e-33 146.0 82 84.1
CAN.G1038.16 Capsicum annuum HOM05D004689 ORTHO05D006269 1.3e-33 146.0 83 81.9
CiPaw.10G001700 Carya illinoinensis HOM05D004689 ORTHO05D006269 1.3e-33 146.0 83 83.1
Nitab4.5_0003314g0100 Nicotiana tabacum HOM05D004689 ORTHO05D006269 1.3e-33 146.0 83 81.9
PGSC0003DMG400003874 Solanum tuberosum HOM05D004689 ORTHO05D006269 1.3e-33 146.0 83 81.9
DCAR_020804 Daucus carota HOM05D004689 ORTHO05D006269 1.8e-33 145.6 83 80.7
Manes.09G064318 Manihot esculenta HOM05D004689 ORTHO05D006269 1.8e-33 145.6 83 81.9
CSS0004382 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 2.3e-33 145.2 83 84.3
CSS0024828 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 2.3e-33 145.2 83 84.3
Hma1.2p1_0225F.1_g095000 Hydrangea macrophylla HOM05D004689 ORTHO05D006269 2.3e-33 145.2 83 83.1
Nn6g35217 Nelumbo nucifera HOM05D004689 ORTHO05D006269 2.3e-33 145.2 83 84.3
Peaxi162Scf00407g00631 Petunia axillaris HOM05D004689 ORTHO05D006269 2.3e-33 145.2 83 81.9
Carub.0004s1393 Capsella rubella HOM05D004689 ORTHO05D006269 3.0e-33 144.8 82 82.9
PSO541G4270 Papaver somniferum HOM05D004689 ORTHO05D006269 3.0e-33 144.8 83 81.9
Actinidia32476 Actinidia chinensis HOM05D004689 ORTHO05D006269 5.1e-33 144.1 83 81.9
COL.COLO4_26909 Corchorus olitorius HOM05D004689 ORTHO05D006269 5.1e-33 144.1 77 87.0
Dinv35815 Davidia involucrata HOM05D004689 ORTHO05D006269 5.1e-33 144.1 83 83.1
Gohir.D09G140400 Gossypium hirsutum HOM05D004689 ORTHO05D006269 5.1e-33 144.1 77 87.0
Gorai.006G161000 Gossypium raimondii HOM05D004689 ORTHO05D006269 5.1e-33 144.1 77 87.0
Lj3C990G15 Lonicera japonica HOM05D004689 ORTHO05D006269 5.1e-33 144.1 80 87.5
Thecc.05G071600 Theobroma cacao HOM05D004689 ORTHO05D006269 5.1e-33 144.1 77 87.0
Thecc.05G071900 Theobroma cacao HOM05D004689 ORTHO05D006269 5.1e-33 144.1 77 87.0
AT2G32600 Arabidopsis thaliana HOM05D004689 ORTHO05D006269 6.7e-33 143.7 82 82.9
Cpa.g.sc87.109 Carica papaya HOM05D004689 ORTHO05D006269 6.7e-33 143.7 83 80.7
CDE03G0163 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 6.7e-33 143.7 83 81.9
CDE06G0795 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 6.7e-33 143.7 83 81.9
Lsat_1_v5_gn_1_52460 Lactuca sativa HOM05D004689 ORTHO05D006269 6.7e-33 143.7 83 81.9
Solyc09g008470.4 Solanum lycopersicum HOM05D004689 ORTHO05D006269 6.7e-33 143.7 74 89.2
Sopen09g003300 Solanum pennellii HOM05D004689 ORTHO05D006269 6.7e-33 143.7 74 89.2
CARHR126450 Cardamine hirsuta HOM05D004689 ORTHO05D006269 8.7e-33 143.3 77 84.4
PSO675G8307 Papaver somniferum HOM05D004689 ORTHO05D006269 8.7e-33 143.3 83 80.7
RcHm_v2.0_Chr7g0191101 Rosa chinensis HOM05D004689 ORTHO05D006269 8.7e-33 143.3 83 81.9
vmacro08797 Vaccinium macrocarpon HOM05D004689 ORTHO05D006269 8.7e-33 143.3 83 80.7
Duzib128G1555 Durio zibethinus HOM05D004689 ORTHO05D006269 1.1e-32 142.9 77 85.7
Potri.006G121300 Populus trichocarpa HOM05D004689 ORTHO05D006269 1.1e-32 142.9 83 81.9
Sabra06G0095500 Salix brachista HOM05D004689 ORTHO05D006269 1.1e-32 142.9 83 81.9
SGA_v2.0_scaffold40G15470 Striga asiatica HOM05D004689 ORTHO05D006269 1.1e-32 142.9 83 78.3
Actinidia31313 Actinidia chinensis HOM05D004689 ORTHO05D006269 2.5e-32 141.7 74 89.2
Oeu042111.1 Olea europaea HOM05D004689 ORTHO05D006269 2.5e-32 141.7 83 79.5
THA.LOC104816037 Tarenaya hassleriana HOM05D004689 ORTHO05D006269 2.5e-32 141.7 83 79.5
C04p17070 Brassica napus HOM05D004689 ORTHO05D006269 3.3e-32 141.4 77 83.1
BolC4t23259H Brassica oleracea HOM05D004689 ORTHO05D006269 3.3e-32 141.4 77 83.1
Cc06_g04560 Coffea canephora HOM05D004689 ORTHO05D006269 3.3e-32 141.4 83 79.5
Aa31LG5G4730 Aethionema arabicum HOM05D004689 ORTHO05D006269 4.3e-32 141.0 77 84.4
A05p13300 Brassica napus HOM05D004689 ORTHO05D006269 4.3e-32 141.0 77 83.1
BraA05t20271Z Brassica rapa HOM05D004689 ORTHO05D006269 4.3e-32 141.0 77 83.1
Gohir.A09G144600 Gossypium hirsutum HOM05D004689 ORTHO05D006269 4.3e-32 141.0 77 85.7
MBI17_g39319_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 5.6e-32 140.6 82 80.5
Potri.016G097600 Populus trichocarpa HOM05D004689 ORTHO05D006269 5.6e-32 140.6 83 79.5
Sp4g14930 Schrenkiella parvula HOM05D004689 ORTHO05D006269 7.4e-32 140.2 77 83.1
ATR0118G005 Amborella trichopoda HOM05D004689 ORTHO05D006269 1.3e-31 139.4 82 80.5
Carub.0007s3257 Capsella rubella HOM05D004689 ORTHO05D006269 1.3e-31 139.4 73 89.0
Thhalv10017051m.g Eutrema salsugineum HOM05D004689 ORTHO05D006269 1.6e-31 139.0 77 81.8
HPP92_017214 Vanilla planifolia HOM05D004689 ORTHO05D006269 1.6e-31 139.0 83 79.5
Ah.08g211440 Amaranthus hybridus HOM05D004689 ORTHO05D006269 2.1e-31 138.7 83 80.7
Ah.15g091430 Amaranthus hybridus HOM05D004689 ORTHO05D006269 2.1e-31 138.7 83 80.7
AUR62026953 Chenopodium quinoa HOM05D004689 ORTHO05D006269 2.1e-31 138.7 83 78.3
AUR62043425 Chenopodium quinoa HOM05D004689 ORTHO05D006269 2.1e-31 138.7 83 78.3
AUR62043819 Chenopodium quinoa HOM05D004689 ORTHO05D006269 2.1e-31 138.7 83 78.3
Hund19382 Selenicereus undatus HOM05D004689 ORTHO05D006269 2.1e-31 138.7 83 78.3
Sc20g0005690 Simmondsia chinensis HOM05D004689 ORTHO05D006269 2.1e-31 138.7 74 86.5
EL10Ac7g16690 Beta vulgaris HOM05D004689 ORTHO05D006269 3.7e-31 137.9 83 77.1
Prupe.7G125300 Prunus persica HOM05D004689 ORTHO05D006269 4.8e-31 137.5 83 79.5
MD12G1106500 Malus domestica HOM05D004689 ORTHO05D006269 6.9e-30 133.7 83 78.3
Mapoly0069s0004 Marchantia polymorpha HOM05D004689 ORTHO05D006269 6.9e-30 133.7 74 85.1
SEGI_10194 Sequoiadendron giganteum HOM05D004689 ORTHO05D006269 9.0e-30 133.3 74 82.4
AagrBONN_evm.TU.Sc2ySwM_344.454 Anthoceros agrestis HOM05D004689 ORTHO05D006269 2.0e-29 132.1 74 85.1
Pp3c15_8160 Physcomitrium patens HOM05D004689 ORTHO05D006269 5.8e-29 130.6 74 82.4
Prupe.4G071900 Prunus persica HOM05D004689 ORTHO05D006269 7.6e-29 130.2 84 76.2
CBR_g54837 Chara braunii HOM05D004689 ORTHO05D006269 2.9e-28 128.3 74 77.0
Pp3c9_13030 Physcomitrium patens HOM05D004689 ORTHO05D006269 3.2e-27 124.8 81 71.6
MD04G1088800 Malus domestica HOM05D004689 ORTHO05D006269 4.2e-27 124.4 76 81.6
Haze_05755 Corylus avellana HOM05D004689 ORTHO05D006269 1.6e-26 122.5 82 72.0
AagrBONN_evm.TU.Sc2ySwM_344.3466 Anthoceros agrestis HOM05D004689 ORTHO05D006269 7.9e-26 120.2 74 78.4
Zm00001eb011590 Zea mays HOM05D004689 ORTHO05D006269 7.9e-26 120.2 72 76.4
Zm00001eb398100 Zea mays HOM05D004689 ORTHO05D006269 3.0e-25 118.2 72 76.4
Os03g0263500 Oryza sativa ssp. japonica HOM05D004689 ORTHO05D006269 1.1e-24 116.3 83 61.4
MCO12G316 Micromonas commoda HOM05D004689 ORTHO05D006269 2.5e-24 115.2 78 64.1
Cre06.g252700 Chlamydomonas reinhardtii HOM05D004689 ORTHO05D006269 5.6e-24 114.0 74 66.2
SMO228G0117 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 6.2e-23 110.5 75 70.7
Haze_06063 Corylus avellana HOM05D004689 ORTHO05D023802 1.4e-22 109.4 66 75.8
PRCOL_00004335 Prasinoderma coloniale HOM05D004689 ORTHO05D006269 2.9e-20 101.7 79 60.8
Nitab4.5_0000349g0040 Nicotiana tabacum HOM05D004689 ORTHO05D006269 1.1e-19 99.8 57 80.7
AagrBONN_evm.TU.Sc2ySwM_344.3364 Anthoceros agrestis HOM05D004689 ORTHO05D006269 3.3e-16 88.2 49 87.8
BcaB02g10459 Brassica carinata HOM05D004689 ORTHO05D006269 9.7e-16 86.7 49 79.6
Haze_26764 Corylus avellana HOM05D004689 ORTHO05D006269 1.6e-15 85.9 57 68.4
SHI12393 Sapria himalayana HOM05D004689 ORTHO05D006269 1.4e-14 82.8 82 56.1
Haze_08899 Corylus avellana HOM05D004689 ORTHO05D165887 6.9e-06 53.9 25 88.0


User provided reference genes

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