Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s2295g0200 Pisum sativum HOM05D005254 ORTHO05D031611 1.2e-109 399.8 199 100.0
Psat0s425g0240 Pisum sativum HOM05D005254 ORTHO05D007557 3.7e-74 282.0 236 66.5
Medtr7g109730 Medicago truncatula HOM05D005254 ORTHO05D007557 1.7e-71 273.1 236 64.8
TPR.G4086 Trifolium pratense HOM05D005254 ORTHO05D007557 2.7e-69 265.8 236 63.1
Ca_09219_v3 Cicer arietinum L. HOM05D005254 ORTHO05D007557 8.7e-68 260.8 236 62.3
Lj1g0000440 Lotus japonicus HOM05D005254 ORTHO05D007557 4.8e-66 255.0 236 60.6
Glyma.19G217500 Glycine max HOM05D005254 ORTHO05D007557 3.8e-63 245.4 250 57.2
Glyma.03G220700 Glycine max HOM05D005254 ORTHO05D007557 8.5e-63 244.2 250 56.4
Lalb_Chr04g0260001 Lupinus albus HOM05D005254 ORTHO05D007557 1.9e-62 243.0 236 57.6
Phvul.001G214200 Phaseolus vulgaris HOM05D005254 ORTHO05D007557 6.1e-61 238.0 239 56.1
VMungo1383G0540 Vigna mungo HOM05D005254 ORTHO05D007557 1.0e-60 237.3 236 57.2
arahy.Tifrunner.gnm1.ann1.AYF5PU Arachis hypogaea HOM05D005254 ORTHO05D007557 6.7e-60 234.6 259 52.1
Lalb_Chr15g0078051 Lupinus albus HOM05D005254 ORTHO05D007557 5.7e-59 231.5 246 53.7
FAN26G2945 Fragaria x ananassa HOM05D005254 ORTHO05D007557 3.1e-57 225.7 236 53.4
FAN23G1174 Fragaria x ananassa HOM05D005254 ORTHO05D007557 4.1e-57 225.3 236 53.4
Potri.002G194000 Populus trichocarpa HOM05D005254 ORTHO05D007557 4.1e-57 225.3 251 50.2
RcHm_v2.0_Chr3g0487381 Rosa chinensis HOM05D005254 ORTHO05D007557 6.9e-57 224.6 246 52.0
FvH4_1g27060 Fragaria vesca HOM05D005254 ORTHO05D007557 2.0e-56 223.0 236 53.0
FAN19G0333 Fragaria x ananassa HOM05D005254 ORTHO05D007557 4.5e-56 221.9 236 52.5
Cfa005773 Carpinus fangiana HOM05D005254 ORTHO05D007557 5.0e-55 218.4 235 51.5
Lj1C15G16 Lonicera japonica HOM05D005254 ORTHO05D007557 5.0e-55 218.4 193 58.0
Manes.05G014200 Manihot esculenta HOM05D005254 ORTHO05D007557 5.0e-55 218.4 238 50.8
Sabra02G0162400 Salix brachista HOM05D005254 ORTHO05D007557 6.5e-55 218.0 238 49.6
CiPaw.07G119100 Carya illinoinensis HOM05D005254 ORTHO05D007557 1.1e-54 217.2 236 50.8
QL12p019422 Quercus lobata HOM05D005254 ORTHO05D007557 1.4e-54 216.9 236 52.1
GSVIVG01028140001 Vitis vinifera HOM05D005254 ORTHO05D007557 3.2e-54 215.7 233 51.9
Atru.chr5.974 Acer truncatum HOM05D005254 ORTHO05D007557 5.5e-54 214.9 238 51.3
CANSAT25G1517 Cannabis sativa HOM05D005254 ORTHO05D007557 7.2e-54 214.5 236 51.3
MD17G1277500 Malus domestica HOM05D005254 ORTHO05D007557 1.2e-53 213.8 235 51.1
Prupe.3G010500 Prunus persica HOM05D005254 ORTHO05D007557 2.1e-53 213.0 235 51.5
Dinv10118 Davidia involucrata HOM05D005254 ORTHO05D007557 7.9e-53 211.1 233 50.6
Thecc.01G315800 Theobroma cacao HOM05D005254 ORTHO05D007557 7.9e-53 211.1 235 48.5
Ciclev10018561m.g Citrus clementina HOM05D005254 ORTHO05D007557 1.8e-52 209.9 238 50.8
Duzib133G0392 Durio zibethinus HOM05D005254 ORTHO05D007557 2.3e-52 209.5 235 48.1
COL.COLO4_23211 Corchorus olitorius HOM05D005254 ORTHO05D007557 3.9e-52 208.8 235 49.8
MD09G1284300 Malus domestica HOM05D005254 ORTHO05D007557 8.8e-52 207.6 238 50.0
Haze_05067 Corylus avellana HOM05D005254 ORTHO05D007557 2.0e-51 206.5 235 50.2
Eucgr.H00999 Eucalyptus grandis HOM05D005254 ORTHO05D007557 2.6e-51 206.1 236 48.3
Actinidia25861 Actinidia chinensis HOM05D005254 ORTHO05D007557 5.7e-51 204.9 238 47.9
Gohir.D08G140700 Gossypium hirsutum HOM05D005254 ORTHO05D007557 9.7e-51 204.1 235 47.7
Gorai.004G144800 Gossypium raimondii HOM05D005254 ORTHO05D007557 9.7e-51 204.1 235 47.7
Sed0015859 Sechium edule HOM05D005254 ORTHO05D007557 1.7e-50 203.4 236 47.5
Rhsim01G0292000 Rhododendron simsii HOM05D005254 ORTHO05D007557 3.7e-50 202.2 237 47.3
DCAR_018280 Daucus carota HOM05D005254 ORTHO05D007557 6.3e-50 201.4 232 47.8
ClCG09G004990 Citrullus lanatus HOM05D005254 ORTHO05D007557 1.4e-49 200.3 233 47.6
CsaV3_7G030070 Cucumis sativus L. HOM05D005254 ORTHO05D007557 1.4e-49 200.3 233 46.8
Gohir.A08G119800 Gossypium hirsutum HOM05D005254 ORTHO05D007557 4.1e-49 198.7 232 47.4
CSS0023845 Camellia sinensis var. sinensis HOM05D005254 ORTHO05D007557 9.1e-49 197.6 234 47.0
CSS0038291 Camellia sinensis var. sinensis HOM05D005254 ORTHO05D007557 9.1e-49 197.6 234 47.0
PGR083G2196 Punica granatum HOM05D005254 ORTHO05D007557 9.1e-49 197.6 230 47.0
TAR633G1480 Trochodendron aralioides HOM05D005254 ORTHO05D007557 1.2e-48 197.2 234 47.0
Aa31LG10G16290 Aethionema arabicum HOM05D005254 ORTHO05D007557 1.6e-48 196.8 234 47.0
arahy.Tifrunner.gnm1.ann1.72UXVZ Arachis hypogaea HOM05D005254 ORTHO05D007557 4.5e-48 195.3 223 52.5
Sc17g0000380 Simmondsia chinensis HOM05D005254 ORTHO05D007557 5.9e-48 194.9 236 45.8
MELO3C015914.2 Cucumis melo HOM05D005254 ORTHO05D007557 7.7e-48 194.5 233 46.8
Hma1.2p1_0486F.1_g163440 Hydrangea macrophylla HOM05D005254 ORTHO05D007557 7.7e-48 194.5 236 47.9
Hma1.2p1_0486F.1_g163430 Hydrangea macrophylla HOM05D005254 ORTHO05D007557 1.0e-47 194.1 237 47.7
TWI36G0433 Tripterygium wilfordii HOM05D005254 ORTHO05D007557 1.3e-47 193.7 238 46.6
Sed0001136 Sechium edule HOM05D005254 ORTHO05D007557 1.7e-47 193.4 232 46.6
CARHR172690 Cardamine hirsuta HOM05D005254 ORTHO05D007557 2.2e-47 193.0 234 46.6
HanXRQChr01g0000761 Helianthus annuus HOM05D005254 ORTHO05D007557 2.9e-47 192.6 235 47.7
A09p54350 Brassica napus HOM05D005254 ORTHO05D007557 5.0e-47 191.8 234 46.2
Carub.0005s2908 Capsella rubella HOM05D005254 ORTHO05D007557 5.0e-47 191.8 234 46.2
AT3G62360 Arabidopsis thaliana HOM05D005254 ORTHO05D007557 6.5e-47 191.4 234 46.6
AL5G45120 Arabidopsis lyrata HOM05D005254 ORTHO05D007557 8.5e-47 191.0 234 46.2
BcaC07g42749 Brassica carinata HOM05D005254 ORTHO05D007557 1.1e-46 190.7 234 45.7
Migut.O00532 Erythranthe guttata HOM05D005254 ORTHO05D007557 1.5e-46 190.3 166 62.0
Migut.N00932 Erythranthe guttata HOM05D005254 ORTHO05D007557 1.9e-46 189.9 233 46.4
MBI18_g03638_MAGBIO Magnolia biondii HOM05D005254 ORTHO05D007557 1.9e-46 189.9 243 46.1
BcaC07g40720 Brassica carinata HOM05D005254 ORTHO05D007557 4.2e-46 188.7 234 46.2
Hund09648 Selenicereus undatus HOM05D005254 ORTHO05D007557 4.2e-46 188.7 236 44.5
Cpa.g.sc18.74 Carica papaya HOM05D005254 ORTHO05D031611 5.5e-46 188.3 152 61.2
THA.LOC104802150 Tarenaya hassleriana HOM05D005254 ORTHO05D007557 7.2e-46 188.0 255 43.9
Aqoxy5G02683 Aquilegia oxysepala HOM05D005254 ORTHO05D007557 9.4e-46 187.6 236 45.3
MSTRG.17387 Avicennia marina HOM05D005254 ORTHO05D007557 9.4e-46 187.6 233 45.9
Thhalv10005752m.g Eutrema salsugineum HOM05D005254 ORTHO05D007557 9.4e-46 187.6 234 44.9
Sp5g01040 Schrenkiella parvula HOM05D005254 ORTHO05D007557 9.4e-46 187.6 234 45.3
ECA248G2092 Erigeron canadensis HOM05D005254 ORTHO05D007557 1.6e-45 186.8 240 45.4
C08p37230 Brassica napus HOM05D005254 ORTHO05D007557 4.7e-45 185.3 234 45.3
Nn3g21729 Nelumbo nucifera HOM05D005254 ORTHO05D007557 6.1e-45 184.9 234 44.4
BraA09t40847Z Brassica rapa HOM05D005254 ORTHO05D007557 1.4e-44 183.7 244 44.3
Cc01_g21580 Coffea canephora HOM05D005254 ORTHO05D007557 4.0e-44 182.2 236 44.5
BcaC08g45197 Brassica carinata HOM05D005254 ORTHO05D007557 5.2e-44 181.8 234 44.0
C06p28230 Brassica napus HOM05D005254 ORTHO05D007557 5.2e-44 181.8 234 44.0
Peaxi162Scf00058g02631 Petunia axillaris HOM05D005254 ORTHO05D007557 3.3e-43 179.1 231 43.3
Nitab4.5_0007407g0050 Nicotiana tabacum HOM05D005254 ORTHO05D007557 1.3e-42 177.2 231 43.7
Solyc06g009530.3 Solanum lycopersicum HOM05D005254 ORTHO05D007557 1.7e-42 176.8 231 42.9
Sopen06g004190 Solanum pennellii HOM05D005254 ORTHO05D007557 1.7e-42 176.8 231 42.9
CAN.G1280.35 Capsicum annuum HOM05D005254 ORTHO05D007557 2.2e-42 176.4 231 42.9
AUR62043231 Chenopodium quinoa HOM05D005254 ORTHO05D007557 3.7e-42 175.6 235 43.0
BolC8t51301H Brassica oleracea HOM05D005254 ORTHO05D007557 4.8e-42 175.3 258 41.9
SalBow2G1139 Salvia bowleyana HOM05D005254 ORTHO05D007557 1.1e-41 174.1 233 43.8
CDE01G0437 Ceratophyllum demersum HOM05D005254 ORTHO05D007557 1.4e-41 173.7 244 42.2
Nitab4.5_0000363g0240 Nicotiana tabacum HOM05D005254 ORTHO05D007557 1.8e-41 173.3 228 43.9
CSS0046339 Camellia sinensis var. sinensis HOM05D005254 ORTHO05D007557 2.4e-41 172.9 215 46.5
AUR62032507 Chenopodium quinoa HOM05D005254 ORTHO05D007557 4.1e-41 172.2 126 66.7
Lsat_1_v5_gn_5_191360 Lactuca sativa HOM05D005254 ORTHO05D007557 4.1e-41 172.2 233 45.1
SGA_v2.0_scaffold6G03340 Striga asiatica HOM05D005254 ORTHO05D007557 5.3e-41 171.8 229 42.4
ATR0693G194 Amborella trichopoda HOM05D005254 ORTHO05D007557 7.0e-41 171.4 144 60.4
PSO170G0810 Papaver somniferum HOM05D005254 ORTHO05D007557 3.5e-40 169.1 233 42.9
Ah.02g112410 Amaranthus hybridus HOM05D005254 ORTHO05D007557 1.0e-39 167.5 236 40.7
PSO357G0205 Papaver somniferum HOM05D005254 ORTHO05D007557 2.9e-39 166.0 232 43.5
SEGI_30263 Sequoiadendron giganteum HOM05D005254 ORTHO05D007557 3.8e-39 165.6 236 41.5
EL10As5g23556 Beta vulgaris HOM05D005254 ORTHO05D007557 5.0e-39 165.2 145 57.9
Zm00001eb340350 Zea mays HOM05D005254 ORTHO05D007557 9.4e-38 161.0 161 52.8
HPP92_011729 Vanilla planifolia HOM05D005254 ORTHO05D007557 2.8e-34 149.4 125 58.4
FAN28G1559 Fragaria x ananassa HOM05D005254 ORTHO05D007557 2.4e-33 146.4 190 44.7
Mapoly0002s0320 Marchantia polymorpha HOM05D005254 ORTHO05D007557 3.1e-33 146.0 138 53.6
vmacro15105 Vaccinium macrocarpon HOM05D005254 ORTHO05D007557 4.1e-33 145.6 104 68.3
Pp3c14_26400 Physcomitrium patens HOM05D005254 ORTHO05D007557 2.7e-32 142.9 146 52.1
SMO145G0116 Selaginella moellendorffii HOM05D005254 ORTHO05D007557 5.0e-31 138.7 126 54.0
AagrBONN_evm.TU.Sc2ySwM_344.3074 Anthoceros agrestis HOM05D005254 ORTHO05D007557 1.8e-28 130.2 128 53.1
Actinidia20982 Actinidia chinensis HOM05D005254 ORTHO05D007557 2.0e-27 126.7 192 40.1
Oeu049924.2 Olea europaea HOM05D005254 ORTHO05D007557 1.7e-26 123.6 174 45.4
arahy.Tifrunner.gnm1.ann1.4QV716 Arachis hypogaea HOM05D005254 ORTHO05D031611 5.9e-24 115.2 164 45.1
BcaC07g40722 Brassica carinata HOM05D005254 ORTHO05D007557 7.3e-22 108.2 195 37.9
CBR_g12556 Chara braunii HOM05D005254 ORTHO05D007557 6.8e-20 101.7 129 42.6
unitig_22.g6696 Utricularia gibba HOM05D005254 ORTHO05D007557 5.7e-19 98.6 207 36.7
CAN.G2.2 Capsicum annuum HOM05D000004 ORTHO05D000002 1.4e-09 67.4 64 56.2
Cpa.g.sc18.77 Carica papaya HOM05D005254 ORTHO05D007557 4.3e-06 55.8 39 61.5


User provided reference genes

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