Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s1274g0040 Pisum sativum HOM05D002535 ORTHO05D006846 7.9e-144 513.8 274 100.0
Psat7g096080 Pisum sativum HOM05D002535 ORTHO05D006846 1.5e-126 456.4 245 99.2
Ca_05547_v3 Cicer arietinum L. HOM05D002535 ORTHO05D006846 1.5e-118 429.9 246 91.1
Medtr5g068600 Medicago truncatula HOM05D002535 ORTHO05D006846 2.0e-115 419.5 246 89.4
LjContig00155g0000379 Lotus japonicus HOM05D002535 ORTHO05D006846 4.4e-110 401.7 247 84.6
TPR.G5823 Trifolium pratense HOM05D002535 ORTHO05D006846 8.5e-106 387.5 225 88.4
Glyma.02G221300 Glycine max HOM05D002535 ORTHO05D006846 8.0e-104 380.9 247 78.9
Phvul.008G188400 Phaseolus vulgaris HOM05D002535 ORTHO05D006846 1.3e-101 373.6 247 78.1
arahy.Tifrunner.gnm1.ann1.DLGH4W Arachis hypogaea HOM05D002535 ORTHO05D006846 5.9e-99 364.8 247 76.5
arahy.Tifrunner.gnm1.ann1.HMHY7M Arachis hypogaea HOM05D002535 ORTHO05D006846 1.7e-98 363.2 247 76.1
Dinv17281 Davidia involucrata HOM05D002535 ORTHO05D006846 1.6e-83 313.5 247 65.6
Haze_00328 Corylus avellana HOM05D002535 ORTHO05D006846 5.9e-83 311.6 247 65.6
GSVIVG01038675001 Vitis vinifera HOM05D002535 ORTHO05D006846 1.7e-82 310.1 247 64.8
Cfa016132 Carpinus fangiana HOM05D002535 ORTHO05D006846 3.0e-82 309.3 247 65.2
CiPaw.05G208400 Carya illinoinensis HOM05D002535 ORTHO05D006846 3.9e-82 308.9 247 66.8
QL09p006081 Quercus lobata HOM05D002535 ORTHO05D006846 1.9e-81 306.6 247 66.0
COL.COLO4_14395 Corchorus olitorius HOM05D002535 ORTHO05D006846 6.2e-80 301.6 246 63.8
TAR375G1062 Trochodendron aralioides HOM05D002535 ORTHO05D006846 8.0e-80 301.2 247 64.4
MD07G1302400 Malus domestica HOM05D002535 ORTHO05D006846 1.4e-79 300.4 247 62.8
Manes.18G108000 Manihot esculenta HOM05D002535 ORTHO05D006846 1.4e-79 300.4 247 62.8
Potri.012G005000 Populus trichocarpa HOM05D002535 ORTHO05D006846 5.2e-79 298.5 247 64.4
CSS0030602 Camellia sinensis var. sinensis HOM05D002535 ORTHO05D006846 8.9e-79 297.7 247 62.8
Sabra12G0000700 Salix brachista HOM05D002535 ORTHO05D006846 1.5e-78 297.0 246 63.0
Prupe.2G321600 Prunus persica HOM05D002535 ORTHO05D006846 2.0e-78 296.6 247 63.2
CSS0041054 Camellia sinensis var. sinensis HOM05D002535 ORTHO05D006846 2.6e-78 296.2 247 62.3
CANSAT21G0133 Cannabis sativa HOM05D002535 ORTHO05D006846 2.6e-78 296.2 247 63.6
RcHm_v2.0_Chr1g0383251 Rosa chinensis HOM05D002535 ORTHO05D006846 7.5e-78 294.7 247 61.5
Sabra12G0007000 Salix brachista HOM05D002535 ORTHO05D006846 9.8e-78 294.3 252 61.5
TWI39G1073 Tripterygium wilfordii HOM05D002535 ORTHO05D006846 1.7e-77 293.5 247 64.0
Atru.chr12.2530 Acer truncatum HOM05D002535 ORTHO05D006846 2.9e-77 292.7 246 65.0
PGR142G0839 Punica granatum HOM05D002535 ORTHO05D006846 3.7e-77 292.4 247 62.3
Atru.chr12.2507 Acer truncatum HOM05D002535 ORTHO05D006846 6.4e-77 291.6 246 65.0
FAN03G0390 Fragaria x ananassa HOM05D002535 ORTHO05D006846 6.4e-77 291.6 247 61.1
Hma1.2p1_0115F.1_g055690 Hydrangea macrophylla HOM05D002535 ORTHO05D006846 1.4e-76 290.4 247 61.9
Thecc.03G211600 Theobroma cacao HOM05D002535 ORTHO05D006846 7.0e-76 288.1 246 60.6
FvH4_7g33260 Fragaria vesca HOM05D002535 ORTHO05D006846 1.6e-75 287.0 247 60.3
Duzib084G0662 Durio zibethinus HOM05D002535 ORTHO05D006846 2.0e-75 286.6 246 61.4
Lj1C1030G8 Lonicera japonica HOM05D002535 ORTHO05D006846 2.0e-75 286.6 246 61.0
HanXRQChr14g0452381 Helianthus annuus HOM05D002535 ORTHO05D006846 3.0e-74 282.7 247 59.9
Cc01_g06440 Coffea canephora HOM05D002535 ORTHO05D006846 1.1e-73 280.8 247 61.5
Eucgr.K00458 Eucalyptus grandis HOM05D002535 ORTHO05D006846 1.5e-73 280.4 241 58.5
Lsat_1_v5_gn_2_5220 Lactuca sativa HOM05D002535 ORTHO05D006846 1.5e-73 280.4 247 58.3
vmacro06471 Vaccinium macrocarpon HOM05D002535 ORTHO05D006846 5.6e-73 278.5 247 57.1
Gorai.008G263400 Gossypium raimondii HOM05D002535 ORTHO05D006846 7.3e-73 278.1 282 54.6
Gohir.A12G245000 Gossypium hirsutum HOM05D002535 ORTHO05D006846 2.1e-72 276.6 282 54.6
Ciclev10018840m.g Citrus clementina HOM05D002535 ORTHO05D006846 4.7e-72 275.4 247 60.7
Nn1g09652 Nelumbo nucifera HOM05D002535 ORTHO05D006846 6.2e-72 275.0 247 59.5
Sed0019266 Sechium edule HOM05D002535 ORTHO05D006846 1.1e-71 274.2 247 56.3
Actinidia08716 Actinidia chinensis HOM05D002535 ORTHO05D006846 1.8e-71 273.5 247 56.7
Oeu055378.1 Olea europaea HOM05D002535 ORTHO05D006846 1.8e-71 273.5 247 59.1
CAN.G303.52 Capsicum annuum HOM05D002535 ORTHO05D006846 6.8e-71 271.6 247 58.7
Migut.F00161 Erythranthe guttata HOM05D002535 ORTHO05D006846 5.8e-70 268.5 247 57.1
Sc19g0000400 Simmondsia chinensis HOM05D002535 ORTHO05D006846 9.9e-70 267.7 247 57.9
Sopen03g021730 Solanum pennellii HOM05D002535 ORTHO05D006846 1.3e-69 267.3 247 58.7
Nitab4.5_0000021g0180 Nicotiana tabacum HOM05D002535 ORTHO05D006846 1.7e-69 266.9 247 59.1
CsaV3_4G009720 Cucumis sativus L. HOM05D002535 ORTHO05D006846 2.2e-69 266.5 246 55.3
MELO3C024845.2 Cucumis melo HOM05D002535 ORTHO05D006846 8.3e-69 264.6 246 54.5
Nitab4.5_0004582g0020 Nicotiana tabacum HOM05D002535 ORTHO05D006846 2.4e-68 263.1 238 59.7
AUR62005953 Chenopodium quinoa HOM05D002535 ORTHO05D006846 1.2e-67 260.8 247 55.9
FAN10G2813 Fragaria x ananassa HOM05D002535 ORTHO05D006846 1.6e-67 260.4 226 61.1
Aqoxy5G04389 Aquilegia oxysepala HOM05D002535 ORTHO05D006846 1.7e-66 256.9 246 57.7
PSO782G3476 Papaver somniferum HOM05D002535 ORTHO05D006846 1.5e-65 253.8 246 55.3
SalBow6G2866 Salvia bowleyana HOM05D002535 ORTHO05D006846 1.5e-65 253.8 275 52.0
DCAR_010560 Daucus carota HOM05D002535 ORTHO05D006846 2.5e-65 253.1 273 53.1
C02p17660 Brassica napus HOM05D002535 ORTHO05D006846 5.6e-65 251.9 247 54.7
THA.LOC104825164 Tarenaya hassleriana HOM05D002535 ORTHO05D006846 5.6e-65 251.9 247 55.1
Aa31LG3G9940 Aethionema arabicum HOM05D002535 ORTHO05D006846 9.5e-65 251.1 245 53.9
Carub.0008s1437 Capsella rubella HOM05D002535 ORTHO05D006846 2.8e-64 249.6 247 53.4
Thhalv10012724m.g Eutrema salsugineum HOM05D002535 ORTHO05D006846 2.8e-64 249.6 247 54.3
BraA02t06123Z Brassica rapa HOM05D002535 ORTHO05D006846 3.6e-64 249.2 247 53.8
BcaC03g14353 Brassica carinata HOM05D002535 ORTHO05D006846 4.7e-64 248.8 247 53.8
A02p10580 Brassica napus HOM05D002535 ORTHO05D006846 4.7e-64 248.8 247 53.8
Sp6g16120 Schrenkiella parvula HOM05D002535 ORTHO05D006846 4.7e-64 248.8 247 53.8
FAN01G2729 Fragaria x ananassa HOM05D002535 ORTHO05D006846 1.1e-63 247.7 215 59.5
BolC2t07896H Brassica oleracea HOM05D002535 ORTHO05D006846 1.4e-63 247.3 247 53.4
AL8G29210 Arabidopsis lyrata HOM05D002535 ORTHO05D006846 2.4e-63 246.5 247 53.8
EL10Ac3g05139 Beta vulgaris HOM05D002535 ORTHO05D006846 4.0e-63 245.7 247 54.7
BcaB05g22108 Brassica carinata HOM05D002535 ORTHO05D006846 4.0e-63 245.7 247 52.6
unitig_748.g7357 Utricularia gibba HOM05D002535 ORTHO05D006846 4.0e-63 245.7 245 53.5
PSO063G0674 Papaver somniferum HOM05D002535 ORTHO05D006846 6.8e-63 245.0 246 54.1
Ah.13g071000 Amaranthus hybridus HOM05D002535 ORTHO05D006846 8.9e-63 244.6 247 52.6
Lalb_Chr10g0103021 Lupinus albus HOM05D002535 ORTHO05D006846 2.0e-62 243.4 154 85.1
Gohir.D12G245800 Gossypium hirsutum HOM05D002535 ORTHO05D006846 5.8e-62 241.9 209 60.8
Peaxi162Scf01026g00257 Petunia axillaris HOM05D002535 ORTHO05D006846 9.9e-62 241.1 246 57.3
SGA_v2.0_scaffold44G16838 Striga asiatica HOM05D002535 ORTHO05D006846 2.2e-61 240.0 287 47.7
AT5G54090 Arabidopsis thaliana HOM05D002535 ORTHO05D006846 2.9e-61 239.6 247 52.6
Rhsim03G0218100 Rhododendron simsii HOM05D002535 ORTHO05D006846 2.1e-59 233.4 267 50.6
ATR0579G153 Amborella trichopoda HOM05D002535 ORTHO05D006846 3.9e-58 229.2 245 50.6
HPP92_007410 Vanilla planifolia HOM05D002535 ORTHO05D006846 6.2e-56 221.9 245 48.6
Solyc03g080010.3 Solanum lycopersicum HOM05D002535 ORTHO05D006846 1.8e-55 220.3 246 51.2
Zm00001eb220610 Zea mays HOM05D002535 ORTHO05D006846 1.9e-49 200.3 244 45.5
MBI04_g09825_MAGBIO Magnolia biondii HOM05D002535 ORTHO05D006846 1.1e-47 194.5 244 47.1
VMungo0647G2508 Vigna mungo HOM05D002535 ORTHO05D006846 2.1e-43 180.3 158 58.9
Cpa.g.sc3.180 Carica papaya HOM05D002535 ORTHO05D006846 7.4e-41 171.8 162 55.6
FAN10G1460 Fragaria x ananassa HOM05D002535 ORTHO05D006846 2.8e-40 169.9 138 63.0
Hund21077 Selenicereus undatus HOM05D002535 ORTHO05D006846 1.7e-37 160.6 428 29.9
Glyma.14G188950 Glycine max HOM05D002535 ORTHO05D006846 1.2e-35 154.5 128 63.3
VMungo0647G0390 Vigna mungo HOM05D002535 ORTHO05D006846 3.0e-34 149.8 92 83.7
ClCG07G009710 Citrullus lanatus HOM05D002535 ORTHO05D006846 6.2e-32 142.1 119 58.0
Pp3c5_20780 Physcomitrium patens HOM05D002535 ORTHO05D006846 4.0e-31 139.4 245 38.4
Lalb_Chr10g0103011 Lupinus albus HOM05D002535 ORTHO05D006846 2.0e-30 137.1 92 67.4
Mapoly0023s0121 Marchantia polymorpha HOM05D002535 ORTHO05D006846 2.0e-30 137.1 246 34.1
AagrBONN_evm.TU.Sc2ySwM_344.1529 Anthoceros agrestis HOM05D002535 ORTHO05D006846 2.2e-29 133.7 244 36.1
ECA238G0251 Erigeron canadensis HOM05D002676 ORTHO05D006846 8.4e-29 131.7 140 55.7
CBR_g37825 Chara braunii HOM05D002535 ORTHO05D006846 1.5e-25 120.9 252 33.3
ClCG07G009720 Citrullus lanatus HOM05D002535 ORTHO05D006846 7.4e-25 118.6 108 55.6
SEGI_06769 Sequoiadendron giganteum HOM05D002535 ORTHO05D006846 4.1e-23 112.8 163 39.9
arahy.Tifrunner.gnm1.ann1.RSL1D2 Arachis hypogaea HOM05D002535 ORTHO05D021471 5.3e-23 112.5 81 65.4
SMO239G0005 Selaginella moellendorffii HOM05D002535 ORTHO05D006846 9.0e-23 111.7 271 29.9
CDE02G3254 Ceratophyllum demersum HOM05D002535 ORTHO05D006846 1.1e-20 104.8 113 49.6
Glyma.14G188900 Glycine max HOM05D002535 ORTHO05D006846 1.9e-20 104.0 64 84.4
arahy.Tifrunner.gnm1.ann1.404A7L Arachis hypogaea HOM05D016021 ORTHO05D021471 4.6e-19 99.4 65 70.8
AUR62028111 Chenopodium quinoa HOM05D002535 ORTHO05D006846 6.7e-18 95.5 92 50.0
TPR.G27024 Trifolium pratense HOM05D002535 ORTHO05D006846 3.1e-15 86.7 51 88.2
arahy.Tifrunner.gnm1.ann1.TZ1XN1 Arachis hypogaea HOM05D002535 ORTHO05D021471 6.9e-15 85.5 58 65.5
Cre01.g040350 Chlamydomonas reinhardtii HOM05D002535 ORTHO05D006846 3.8e-13 79.7 247 25.9
arahy.Tifrunner.gnm1.ann1.YSF7LC Arachis hypogaea HOM05D002535 ORTHO05D021471 6.1e-11 72.4 54 59.3
Haze_05874 Corylus avellana HOM05D002535 ORTHO05D021471 7.4e-09 65.5 61 54.1
Haze_18350 Corylus avellana HOM05D005612 ORTHO05D007014 7.4e-09 65.5 61 52.5
CARHR267280 Cardamine hirsuta HOM05D002535 ORTHO05D006846 2.2e-08 63.9 67 49.3
Haze_18353 Corylus avellana HOM05D002535 ORTHO05D021471 2.8e-08 63.5 64 50.0
MCO04G146 Micromonas commoda HOM05D002535 ORTHO05D006846 2.4e-07 60.5 237 24.1


User provided reference genes

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