Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G144500 Prunus persica HOM05D002835 ORTHO05D003008 1.9e-103 379.4 224 100.0
Duzib128G1841 Durio zibethinus HOM05D002835 ORTHO05D003008 1.1e-15 87.8 167 34.7
Gohir.D10G198700 Gossypium hirsutum HOM05D002835 ORTHO05D003008 3.3e-15 86.3 176 33.0
Duzib114G0429 Durio zibethinus HOM05D002835 ORTHO05D003008 4.3e-15 85.9 168 34.5
COL.COLO4_05752 Corchorus olitorius HOM05D002835 ORTHO05D003008 5.7e-15 85.5 162 35.2
Gohir.A10G191000 Gossypium hirsutum HOM05D002835 ORTHO05D003008 3.7e-14 82.8 176 33.0
Thecc.10G136700 Theobroma cacao HOM05D002835 ORTHO05D003008 3.7e-14 82.8 167 33.5
Gorai.011G222600 Gossypium raimondii HOM05D002835 ORTHO05D003008 4.8e-14 82.4 176 32.4
Gohir.A06G173500 Gossypium hirsutum HOM05D002835 ORTHO05D003008 1.4e-13 80.9 167 32.9
Gorai.010G214500 Gossypium raimondii HOM05D002835 ORTHO05D003008 1.4e-13 80.9 167 32.9
Gohir.D06G183500 Gossypium hirsutum HOM05D002835 ORTHO05D003008 1.8e-13 80.5 167 32.9
Cpa.g.sc73.6 Carica papaya HOM05D002835 ORTHO05D003008 3.1e-13 79.7 177 32.8
Carub.0003s1176 Capsella rubella HOM05D002835 ORTHO05D003008 5.3e-13 79.0 178 33.1
AT3G12400 Arabidopsis thaliana HOM05D002835 ORTHO05D003008 9.0e-13 78.2 176 31.8
A03p37620 Brassica napus HOM05D002835 ORTHO05D003008 9.0e-13 78.2 168 31.5
BraA03t12916Z Brassica rapa HOM05D002835 ORTHO05D003008 9.0e-13 78.2 168 31.5
Ciclev10001331m.g Citrus clementina HOM05D002835 ORTHO05D003008 9.0e-13 78.2 167 32.3
Cc11_g05290 Coffea canephora HOM05D002835 ORTHO05D003008 9.0e-13 78.2 171 29.8
PGR031G1101 Punica granatum HOM05D002835 ORTHO05D003008 9.0e-13 78.2 172 28.5
arahy.Tifrunner.gnm1.ann1.XZG5F2 Arachis hypogaea HOM05D002835 ORTHO05D003008 1.5e-12 77.4 169 31.4
AL3G24060 Arabidopsis lyrata HOM05D002835 ORTHO05D003008 2.0e-12 77.0 178 32.6
TAR374G0026 Trochodendron aralioides HOM05D002835 ORTHO05D003008 2.0e-12 77.0 156 33.3
TAR374G0392 Trochodendron aralioides HOM05D002835 ORTHO05D003008 2.0e-12 77.0 156 33.3
CARHR086930 Cardamine hirsuta HOM05D002835 ORTHO05D003008 2.6e-12 76.6 176 31.8
Cpa.g.sc33.161 Carica papaya HOM05D002835 ORTHO05D003008 2.6e-12 76.6 171 31.6
DCAR_001965 Daucus carota HOM05D002835 ORTHO05D003008 3.4e-12 76.3 169 31.4
Duzib106G0702 Durio zibethinus HOM05D002835 ORTHO05D003008 3.4e-12 76.3 165 32.7
Manes.11G009300 Manihot esculenta HOM05D002835 ORTHO05D003008 3.4e-12 76.3 168 32.1
TAR629G1403 Trochodendron aralioides HOM05D002835 ORTHO05D003008 3.4e-12 76.3 161 32.3
ClCG11G013010 Citrullus lanatus HOM05D002835 ORTHO05D003008 4.5e-12 75.9 165 32.1
CsaV3_5G029500 Cucumis sativus L. HOM05D002835 ORTHO05D003008 4.5e-12 75.9 165 32.1
Lalb_Chr03g0024731 Lupinus albus HOM05D002835 ORTHO05D003008 4.5e-12 75.9 167 31.7
MELO3C011795.2 Cucumis melo HOM05D002835 ORTHO05D003008 5.9e-12 75.5 165 32.1
Manes.04G154600 Manihot esculenta HOM05D002835 ORTHO05D003008 5.9e-12 75.5 165 33.3
Sed0003493 Sechium edule HOM05D002835 ORTHO05D003008 7.7e-12 75.1 165 31.5
Sp3g10590 Schrenkiella parvula HOM05D002835 ORTHO05D003008 1.0e-11 74.7 179 31.8
THA.LOC104809910 Tarenaya hassleriana HOM05D002835 ORTHO05D003008 1.0e-11 74.7 175 30.3
Thhalv10022018m.g Eutrema salsugineum HOM05D002835 ORTHO05D003008 1.3e-11 74.3 177 31.6
AT5G13860 Arabidopsis thaliana HOM05D002835 ORTHO05D003008 1.7e-11 73.9 178 30.9
BcaB04g18682 Brassica carinata HOM05D002835 ORTHO05D003008 2.2e-11 73.6 156 31.4
BcaC01g04050 Brassica carinata HOM05D002835 ORTHO05D003008 2.2e-11 73.6 168 30.4
BcaC05g29264 Brassica carinata HOM05D002835 ORTHO05D003008 2.2e-11 73.6 167 30.5
C03p45610 Brassica napus HOM05D002835 ORTHO05D003008 2.2e-11 73.6 168 30.4
BolC3t16838H Brassica oleracea HOM05D002835 ORTHO05D003008 2.2e-11 73.6 168 30.4
BolC5t34209H Brassica oleracea HOM05D002835 ORTHO05D003008 2.2e-11 73.6 167 30.5
TWI38G1269 Tripterygium wilfordii HOM05D002835 ORTHO05D003008 2.9e-11 73.2 178 30.9
VMungo1127G1778 Vigna mungo HOM05D002835 ORTHO05D003008 2.9e-11 73.2 168 32.1
Glyma.11G099100 Glycine max HOM05D002835 ORTHO05D003008 3.8e-11 72.8 167 31.7
Glyma.12G025300 Glycine max HOM05D002835 ORTHO05D003008 3.8e-11 72.8 167 31.7
Oeu009488.1 Olea europaea HOM05D002835 ORTHO05D003008 3.8e-11 72.8 109 35.8
unitig_0.g1017 Utricularia gibba HOM05D002835 ORTHO05D003008 3.8e-11 72.8 162 32.1
MSTRG.8266 Avicennia marina HOM05D002835 ORTHO05D003008 5.0e-11 72.4 162 30.2
Nitab4.5_0005447g0040 Nicotiana tabacum HOM05D002835 ORTHO05D003008 5.0e-11 72.4 169 31.4
SHI11341 Sapria himalayana HOM05D002640 ORTHO05D003231 5.0e-11 72.4 164 31.7
SGA_v2.0_scaffold2G01033 Striga asiatica HOM05D002835 ORTHO05D003008 5.0e-11 72.4 162 30.9
THA.LOC104826744 Tarenaya hassleriana HOM05D002835 ORTHO05D003008 5.0e-11 72.4 170 30.6
Lalb_Chr19g0139471 Lupinus albus HOM05D002835 ORTHO05D003008 6.5e-11 72.0 166 30.7
Nitab4.5_0000381g0320 Nicotiana tabacum HOM05D002835 ORTHO05D003008 6.5e-11 72.0 163 30.7
SalBow6G4288 Salvia bowleyana HOM05D002835 ORTHO05D003008 6.5e-11 72.0 162 30.9
MD00G1152100 Malus domestica HOM05D002835 ORTHO05D003008 8.5e-11 71.6 165 30.9
MD02G1270800 Malus domestica HOM05D002835 ORTHO05D003008 8.5e-11 71.6 165 31.5
SGA_v2.0_scaffold221G42693 Striga asiatica HOM05D002835 ORTHO05D003008 8.5e-11 71.6 162 29.6
AL6G24500 Arabidopsis lyrata HOM05D002835 ORTHO05D003008 1.1e-10 71.2 178 29.2
CiPaw.13G017600 Carya illinoinensis HOM05D002835 ORTHO05D003008 1.1e-10 71.2 159 32.1
Nitab4.5_0004567g0050 Nicotiana tabacum HOM05D002835 ORTHO05D003008 1.1e-10 71.2 159 30.2
Atru.chr12.1228 Acer truncatum HOM05D002835 ORTHO05D003008 1.4e-10 70.9 161 32.9
CSS0008682 Camellia sinensis var. sinensis HOM05D002835 ORTHO05D003008 1.4e-10 70.9 170 28.2
Sp6g30140 Schrenkiella parvula HOM05D002835 ORTHO05D003008 1.9e-10 70.5 165 30.9
EL10Ac2g03190 Beta vulgaris HOM05D002835 ORTHO05D003008 2.5e-10 70.1 158 31.0
Phvul.011G027400 Phaseolus vulgaris HOM05D002835 ORTHO05D003008 2.5e-10 70.1 168 31.5
Aa31sc601G10 Aethionema arabicum HOM05D002835 ORTHO05D003008 3.2e-10 69.7 162 30.2
C05p55430 Brassica napus HOM05D002835 ORTHO05D003008 3.2e-10 69.7 167 29.9
Prupe.2G048600 Prunus persica HOM05D002835 ORTHO05D003008 3.2e-10 69.7 168 29.8
Solyc09g009270.2 Solanum lycopersicum HOM05D002835 ORTHO05D003008 3.2e-10 69.7 153 29.4
BraA02t05195Z Brassica rapa HOM05D002835 ORTHO05D003008 5.5e-10 68.9 105 39.0
Sopen09g004000 Solanum pennellii HOM05D002835 ORTHO05D003008 5.5e-10 68.9 153 29.4
CBR_g8221 Chara braunii HOM05D002835 ORTHO05D003008 7.2e-10 68.6 124 35.5
FAN12G2978 Fragaria x ananassa HOM05D002835 ORTHO05D003008 7.2e-10 68.6 138 34.8
FAN13G2664 Fragaria x ananassa HOM05D002835 ORTHO05D003008 7.2e-10 68.6 138 34.8
FAN17G1208 Fragaria x ananassa HOM05D002835 ORTHO05D003008 7.2e-10 68.6 138 34.8
FAN20G0724 Fragaria x ananassa HOM05D002835 ORTHO05D003008 7.2e-10 68.6 138 34.8
PGSC0003DMG400002673 Solanum tuberosum HOM05D002835 ORTHO05D003008 7.2e-10 68.6 153 28.8
A02p02230 Brassica napus HOM05D002835 ORTHO05D003008 9.4e-10 68.2 105 39.0
BolC2t06593H Brassica oleracea HOM05D002835 ORTHO05D003008 9.4e-10 68.2 105 39.0
Haze_02964 Corylus avellana HOM05D002835 ORTHO05D003008 9.4e-10 68.2 167 29.3
Oeu039033.2 Olea europaea HOM05D002835 ORTHO05D003008 9.4e-10 68.2 165 29.1
Ah.12g060100 Amaranthus hybridus HOM05D002835 ORTHO05D003008 1.2e-09 67.8 97 39.2
C02p06470 Brassica napus HOM05D002835 ORTHO05D003008 1.2e-09 67.8 105 39.0
FvH4_4g12000 Fragaria vesca HOM05D002835 ORTHO05D003008 1.2e-09 67.8 124 35.5
FAN12G0853 Fragaria x ananassa HOM05D002835 ORTHO05D003008 1.2e-09 67.8 124 35.5
FAN22G1893 Fragaria x ananassa HOM05D002835 ORTHO05D003008 1.2e-09 67.8 124 35.5
Migut.F00759 Erythranthe guttata HOM05D002835 ORTHO05D003008 1.6e-09 67.4 106 36.8
TWI63G1731 Tripterygium wilfordii HOM05D002835 ORTHO05D003008 2.1e-09 67.0 159 31.4
Mapoly0055s0078 Marchantia polymorpha HOM05D002835 ORTHO05D003008 3.6e-09 66.2 124 35.5
MCO09G289 Micromonas commoda HOM05D002835 ORTHO05D003008 3.6e-09 66.2 168 30.4
Carub.0006s1205 Capsella rubella HOM05D002835 ORTHO05D003008 7.9e-09 65.1 165 29.7
Thhalv10013854m.g Eutrema salsugineum HOM05D002835 ORTHO05D003008 1.0e-08 64.7 162 29.6
Sed0015789 Sechium edule HOM05D002835 ORTHO05D003008 1.0e-08 64.7 168 31.0
CiPaw.14G011100 Carya illinoinensis HOM05D002835 ORTHO05D003008 1.4e-08 64.3 159 30.2
Cfa026261 Carpinus fangiana HOM05D002835 ORTHO05D003008 3.0e-08 63.2 123 30.1
AUR62037784 Chenopodium quinoa HOM05D002835 ORTHO05D003008 5.1e-08 62.4 103 37.9
AUR62042227 Chenopodium quinoa HOM05D002835 ORTHO05D003008 5.1e-08 62.4 103 37.9
CARHR199570 Cardamine hirsuta HOM05D002835 ORTHO05D003008 6.7e-08 62.0 112 34.8
RcHm_v2.0_Chr6g0252011 Rosa chinensis HOM05D032211 ORTHO05D035840 8.8e-08 61.6 127 37.0
SalBow5G0637 Salvia bowleyana HOM05D002835 ORTHO05D003008 2.0e-07 60.5 103 35.0
ECA236G0686 Erigeron canadensis HOM05D002835 ORTHO05D003008 3.3e-07 59.7 124 31.5
Cre07.g351050 Chlamydomonas reinhardtii HOM05D002835 ORTHO05D003008 6.3e-06 55.5 97 32.0
Medtr5g075880 Medicago truncatula HOM05D002835 ORTHO05D003008 6.3e-06 55.5 91 37.4


User provided reference genes

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