Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 4.0e-171 604.7 326 100.0
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 9.4e-144 513.8 323 85.4
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 4.8e-140 501.5 322 81.1
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 1.2e-133 480.3 320 75.0
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 5.7e-133 478.0 320 74.7
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 3.7e-132 475.3 323 74.6
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.4e-131 473.4 323 74.0
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 2.6e-125 452.6 325 70.2
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 4.2e-120 435.3 320 68.8
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 3.6e-119 432.2 323 68.1
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 8.0e-119 431.0 320 66.9
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 8.0e-119 431.0 321 66.4
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 6.8e-118 427.9 320 66.2
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 6.8e-118 427.9 322 65.8
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 1.2e-117 427.2 320 68.1
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 2.6e-117 426.0 323 67.2
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 7.5e-117 424.5 325 70.5
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 1.3e-116 423.7 321 65.4
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 1.7e-116 423.3 323 65.9
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 2.8e-116 422.5 320 63.8
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 6.3e-116 421.4 327 65.1
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 3.1e-115 419.1 320 65.9
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 3.1e-115 419.1 321 64.5
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 5.4e-115 418.3 323 64.7
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 7.0e-115 417.9 322 64.9
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 9.2e-115 417.5 328 64.3
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 1.2e-114 417.2 321 64.8
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 1.6e-114 416.8 321 65.7
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 1.6e-114 416.8 321 65.4
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 2.7e-114 416.0 322 65.8
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 4.5e-114 415.2 321 66.4
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 7.8e-114 414.5 322 65.8
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 2.3e-113 412.9 328 63.1
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 3.8e-113 412.1 322 65.2
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 8.6e-113 411.0 325 61.8
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 8.6e-113 411.0 322 68.3
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 8.6e-113 411.0 331 62.2
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 1.5e-112 410.2 322 64.6
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 3.3e-112 409.1 321 64.2
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 9.5e-112 407.5 329 62.6
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 1.2e-111 407.1 321 63.2
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.1e-111 406.4 330 61.2
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 2.8e-111 406.0 328 62.2
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 3.6e-111 405.6 322 64.6
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 6.1e-111 404.8 321 64.2
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 8.0e-111 404.4 325 63.4
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 2.3e-110 402.9 321 62.9
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 2.0e-109 399.8 321 62.6
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 1.1e-107 394.0 330 58.8
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 6.0e-106 388.3 320 60.3
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 1.3e-105 387.1 361 55.1
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 1.7e-105 386.7 321 60.7
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 6.6e-105 384.8 330 57.0
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 1.1e-104 384.0 322 60.9
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 1.5e-104 383.6 321 60.1
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 1.9e-104 383.3 321 59.5
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 2.5e-104 382.9 321 60.1
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 3.3e-104 382.5 321 60.4
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 3.3e-104 382.5 278 66.5
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 4.3e-104 382.1 321 59.8
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 5.6e-104 381.7 320 59.7
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 5.6e-104 381.7 327 58.4
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 5.6e-104 381.7 330 56.4
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 1.2e-103 380.6 325 59.1
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 1.6e-103 380.2 323 59.8
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 2.1e-103 379.8 321 60.1
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 2.1e-103 379.8 321 59.8
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 2.8e-103 379.4 333 55.9
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 4.7e-103 378.6 370 54.6
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 8.0e-103 377.9 332 56.6
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 1.1e-102 377.5 332 57.5
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 1.4e-102 377.1 343 56.6
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 1.8e-102 376.7 320 57.8
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 2.3e-102 376.3 332 57.2
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 2.3e-102 376.3 332 57.2
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 8.9e-102 374.4 250 73.2
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 1.2e-101 374.0 294 66.3
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 2.0e-101 373.2 323 59.8
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 1.3e-100 370.5 320 58.1
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 1.3e-100 370.5 422 50.0
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 6.4e-100 368.2 323 58.5
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 8.3e-100 367.9 334 54.2
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 3.2e-99 365.9 340 54.4
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 9.2e-99 364.4 277 64.3
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 1.2e-98 364.0 321 57.9
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 2.0e-98 363.2 323 57.0
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 1.4e-94 350.5 327 54.1
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 1.8e-94 350.1 323 54.8
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 1.5e-93 347.1 322 55.9
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 3.5e-90 335.9 324 54.9
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 1.7e-89 333.6 362 50.0
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 2.5e-88 329.7 204 77.5
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 1.8e-86 323.6 252 61.9
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 5.8e-85 318.5 281 55.5
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 3.9e-81 305.8 216 69.4
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 6.6e-81 305.1 231 63.6
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 4.0e-78 295.8 281 53.4
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 9.9e-77 291.2 231 63.6
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 1.7e-76 290.4 281 54.4
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 5.4e-75 285.4 282 50.4
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 4.0e-70 269.2 204 64.7
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 4.0e-70 269.2 204 64.7
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 9.9e-61 238.0 206 57.8
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 6.0e-58 228.8 300 40.7
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 1.0e-57 228.0 204 54.9
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 1.8e-57 227.3 295 43.1
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 2.5e-56 223.4 286 43.7
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 3.4e-53 213.0 230 50.9
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 1.9e-51 207.2 173 59.5
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 1.2e-50 204.5 282 40.8
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 7.9e-50 201.8 160 63.8
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 7.9e-50 201.8 160 63.8
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 1.0e-41 174.9 102 81.4
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 2.5e-40 170.2 277 41.2
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 3.7e-39 166.4 322 36.3
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 4.1e-38 162.9 97 78.4
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 1.2e-37 161.4 400 30.0
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 1.7e-36 157.5 173 49.7
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.1e-35 154.8 113 65.5
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 3.9e-33 146.4 116 62.9
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 1.0e-20 105.1 353 26.9
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 1.9e-19 100.9 67 70.1
Dinv12483 Davidia involucrata HOM05D005933 ORTHO05D007366 1.4e-17 94.7 106 48.1
SHI32976 Sapria himalayana HOM05D000105 ORTHO05D000023 3.0e-17 93.6 109 45.9
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 8.8e-17 92.0 99 53.5
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 1.3e-12 78.2 90 48.9


User provided reference genes

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