Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G271300 Prunus persica HOM05D004198 ORTHO05D015220 1.0e-54 216.5 110 100.0
Prupe.7G189800 Prunus persica HOM05D004198 ORTHO05D006470 2.0e-50 202.2 110 96.4
Prupe.6G271400 Prunus persica HOM05D004198 ORTHO05D015220 3.6e-47 191.4 97 100.0
MD02G1105300 Malus domestica HOM05D004198 ORTHO05D006470 1.4e-46 189.5 110 87.3
MD02G1105000 Malus domestica HOM05D004198 ORTHO05D006470 1.5e-45 186.0 110 86.4
FvH4_1g09640 Fragaria vesca HOM05D004198 ORTHO05D006470 2.2e-44 182.2 111 84.7
FAN19G0627 Fragaria x ananassa HOM05D004198 ORTHO05D006470 2.2e-44 182.2 111 84.7
FAN26G2565 Fragaria x ananassa HOM05D004198 ORTHO05D006470 2.2e-44 182.2 111 84.7
FAN28G0237 Fragaria x ananassa HOM05D004198 ORTHO05D006470 8.3e-44 180.3 111 83.8
RcHm_v2.0_Chr2g0096481 Rosa chinensis HOM05D004198 ORTHO05D006470 7.0e-43 177.2 110 82.7
QL11p003422 Quercus lobata HOM05D004198 ORTHO05D006470 1.1e-40 169.9 109 77.1
Actinidia39606 Actinidia chinensis HOM05D004198 ORTHO05D006470 4.3e-40 167.9 110 77.3
vmacro17070 Vaccinium macrocarpon HOM05D004198 ORTHO05D006470 4.3e-40 167.9 110 75.5
Rhsim05G0001300 Rhododendron simsii HOM05D004198 ORTHO05D006470 5.6e-40 167.5 110 75.5
COL.COLO4_21183 Corchorus olitorius HOM05D004198 ORTHO05D006470 7.3e-40 167.2 110 78.2
Duzib168G0708 Durio zibethinus HOM05D004198 ORTHO05D006470 9.5e-40 166.8 110 75.5
GSVIVG01014998001 Vitis vinifera HOM05D004198 ORTHO05D006470 1.2e-39 166.4 110 77.3
CANSAT56G1757 Cannabis sativa HOM05D004198 ORTHO05D006470 1.6e-39 166.0 110 76.4
Potri.006G134300 Populus trichocarpa HOM05D004198 ORTHO05D006470 1.6e-39 166.0 110 76.4
CSS0027728 Camellia sinensis var. sinensis HOM05D004198 ORTHO05D006470 2.8e-39 165.2 108 75.0
Atru.chr7.1797 Acer truncatum HOM05D004198 ORTHO05D006470 1.1e-38 163.3 110 74.5
Manes.16G088900 Manihot esculenta HOM05D004198 ORTHO05D006470 1.1e-38 163.3 110 74.5
Sabra06G0105400 Salix brachista HOM05D004198 ORTHO05D006470 1.4e-38 162.9 110 73.6
TAR624G1053 Trochodendron aralioides HOM05D004198 ORTHO05D006470 1.8e-38 162.5 110 72.7
TWI63G0842 Tripterygium wilfordii HOM05D004198 ORTHO05D006470 2.3e-38 162.2 110 71.8
Ciclev10007313m.g Citrus clementina HOM05D004198 ORTHO05D006470 3.1e-38 161.8 107 74.8
Cfa002929 Carpinus fangiana HOM05D004198 ORTHO05D006470 4.0e-38 161.4 110 73.6
A01p05020 Brassica napus HOM05D004198 ORTHO05D006470 8.9e-38 160.2 110 72.7
BraA01t00484Z Brassica rapa HOM05D004198 ORTHO05D006470 8.9e-38 160.2 110 72.7
BolC1t00527H Brassica oleracea HOM05D004198 ORTHO05D006470 1.5e-37 159.5 110 72.7
Duzib150G0139 Durio zibethinus HOM05D004198 ORTHO05D006470 1.5e-37 159.5 110 71.8
Gohir.A06G082000 Gossypium hirsutum HOM05D004198 ORTHO05D006470 1.5e-37 159.5 110 71.8
BcaC09g52122 Brassica carinata HOM05D004198 ORTHO05D006470 2.0e-37 159.1 110 72.7
C01p05470 Brassica napus HOM05D004198 ORTHO05D006470 2.0e-37 159.1 110 72.7
Gohir.D06G081400 Gossypium hirsutum HOM05D004198 ORTHO05D006470 2.0e-37 159.1 110 70.0
Sp7g30900 Schrenkiella parvula HOM05D004198 ORTHO05D006470 5.8e-37 157.5 110 70.9
Gorai.010G094700 Gossypium raimondii HOM05D004198 ORTHO05D006470 9.8e-37 156.8 110 69.1
PGR044G0871 Punica granatum HOM05D004198 ORTHO05D006470 1.3e-36 156.4 110 70.9
Thecc.09G068000 Theobroma cacao HOM05D004198 ORTHO05D006470 1.3e-36 156.4 110 70.9
PSO724G0393 Papaver somniferum HOM05D004198 ORTHO05D006470 1.7e-36 156.0 110 70.0
AL7G18400 Arabidopsis lyrata HOM05D004198 ORTHO05D006470 2.2e-36 155.6 110 70.9
Thhalv10024287m.g Eutrema salsugineum HOM05D004198 ORTHO05D006470 2.9e-36 155.2 110 70.0
Carub.0007s0730 Capsella rubella HOM05D004198 ORTHO05D006470 3.7e-36 154.8 110 70.9
Nn8g38508 Nelumbo nucifera HOM05D004198 ORTHO05D006470 3.7e-36 154.8 110 67.3
PSO135G0314 Papaver somniferum HOM05D004198 ORTHO05D006470 3.7e-36 154.8 110 69.1
Ca_21348_v3 Cicer arietinum L. HOM05D004198 ORTHO05D006470 6.4e-36 154.1 110 70.0
Phvul.003G126300 Phaseolus vulgaris HOM05D004198 ORTHO05D006470 6.4e-36 154.1 110 67.3
CiPaw.03G199300 Carya illinoinensis HOM05D004198 ORTHO05D006470 1.1e-35 153.3 110 69.1
Lalb_Chr12g0200381 Lupinus albus HOM05D004198 ORTHO05D006470 1.1e-35 153.3 110 70.9
CsaV3_1G041440 Cucumis sativus L. HOM05D004198 ORTHO05D006470 1.4e-35 152.9 109 67.9
Aqoxy7G04190 Aquilegia oxysepala HOM05D004198 ORTHO05D006470 1.9e-35 152.5 110 65.5
Cpa.g.sc82.44 Carica papaya HOM05D004198 ORTHO05D006470 1.9e-35 152.5 109 70.6
Medtr4g124470 Medicago truncatula HOM05D004198 ORTHO05D006470 1.9e-35 152.5 110 70.0
Hund08916 Selenicereus undatus HOM05D004198 ORTHO05D006470 1.9e-35 152.5 111 69.4
Peaxi162Scf00452g00120 Petunia axillaris HOM05D004198 ORTHO05D006470 2.4e-35 152.1 110 67.3
Glyma.13G115500 Glycine max HOM05D004198 ORTHO05D006470 3.2e-35 151.8 110 68.2
Nitab4.5_0000055g0100 Nicotiana tabacum HOM05D004198 ORTHO05D006470 3.2e-35 151.8 110 68.2
MBI13_g01654_MAGBIO Magnolia biondii HOM05D004198 ORTHO05D006470 4.1e-35 151.4 109 68.8
Sed0024058 Sechium edule HOM05D004198 ORTHO05D006470 7.0e-35 150.6 109 67.0
Aa31sc786G10 Aethionema arabicum HOM05D004198 ORTHO05D006470 9.2e-35 150.2 110 68.2
Nitab4.5_0001114g0030 Nicotiana tabacum HOM05D004198 ORTHO05D006470 9.2e-35 150.2 110 67.3
AT4G33150 Arabidopsis thaliana HOM05D004198 ORTHO05D006470 1.2e-34 149.8 110 70.0
VMungo1215G1653 Vigna mungo HOM05D004198 ORTHO05D006470 2.1e-34 149.1 110 66.4
ClCG03G014720 Citrullus lanatus HOM05D004198 ORTHO05D006470 3.5e-34 148.3 109 65.1
Hma1.2p1_0179F.1_g079100 Hydrangea macrophylla HOM05D004198 ORTHO05D006470 3.5e-34 148.3 110 66.4
THA.LOC104804447 Tarenaya hassleriana HOM05D004198 ORTHO05D006470 6.0e-34 147.5 110 67.3
EL10Ac8g18953 Beta vulgaris HOM05D004198 ORTHO05D006470 7.8e-34 147.1 110 65.5
Lj4g0026986 Lotus japonicus HOM05D004198 ORTHO05D006470 1.3e-33 146.4 109 67.9
Sc14g0000910 Simmondsia chinensis HOM05D004198 ORTHO05D006470 1.3e-33 146.4 109 65.1
Zm00001eb192910 Zea mays HOM05D004198 ORTHO05D006470 1.3e-33 146.4 109 63.3
ECA240G2250 Erigeron canadensis HOM05D004198 ORTHO05D006470 1.7e-33 146.0 110 65.5
Migut.J00870 Erythranthe guttata HOM05D004198 ORTHO05D006470 2.3e-33 145.6 110 64.5
SalBow6G6057 Salvia bowleyana HOM05D004198 ORTHO05D006470 2.3e-33 145.6 110 65.5
TPR.G12649 Trifolium pratense HOM05D004198 ORTHO05D006470 3.9e-33 144.8 110 67.3
MELO3C015556.2 Cucumis melo HOM05D004198 ORTHO05D006470 5.0e-33 144.4 109 65.1
Sopen07g006460 Solanum pennellii HOM05D004198 ORTHO05D006470 5.0e-33 144.4 110 64.5
AUR62028335 Chenopodium quinoa HOM05D004198 ORTHO05D006470 6.6e-33 144.1 110 65.5
Cc00_g13780 Coffea canephora HOM05D004198 ORTHO05D015220 6.6e-33 144.1 110 64.5
AUR62025328 Chenopodium quinoa HOM05D004198 ORTHO05D006470 1.5e-32 142.9 110 65.5
MSTRG.5977 Avicennia marina HOM05D004198 ORTHO05D006470 1.9e-32 142.5 110 61.8
arahy.Tifrunner.gnm1.ann1.54PPAU Arachis hypogaea HOM05D004198 ORTHO05D006470 3.3e-32 141.7 110 63.6
arahy.Tifrunner.gnm1.ann1.Q7P4IG Arachis hypogaea HOM05D004198 ORTHO05D006470 3.3e-32 141.7 110 63.6
Os02g0783700 Oryza sativa ssp. japonica HOM05D004198 ORTHO05D006470 3.3e-32 141.7 109 60.6
CDE05G0275 Ceratophyllum demersum HOM05D004198 ORTHO05D015220 4.3e-32 141.4 109 64.2
PGSC0003DMG400002302 Solanum tuberosum HOM05D004198 ORTHO05D015220 4.3e-32 141.4 110 63.6
HPP92_009326 Vanilla planifolia HOM05D004198 ORTHO05D006470 5.6e-32 141.0 109 61.5
Solyc07g017610.3 Solanum lycopersicum HOM05D004198 ORTHO05D006470 1.2e-31 139.8 110 62.7
SEGI_08338 Sequoiadendron giganteum HOM05D004198 ORTHO05D006470 6.2e-31 137.5 109 62.4
Lj4C923T7 Lonicera japonica HOM05D004198 ORTHO05D006470 8.1e-31 137.1 111 63.1
HanXRQChr03g0060011 Helianthus annuus HOM05D004198 ORTHO05D006470 2.3e-30 135.6 110 60.9
DCAR_011904 Daucus carota HOM05D004198 ORTHO05D006470 8.9e-30 133.7 110 60.0
Oeu021231.1 Olea europaea HOM05D004198 ORTHO05D006470 1.2e-29 133.3 94 70.2
Eucgr.C03183 Eucalyptus grandis HOM05D004198 ORTHO05D006470 1.5e-29 132.9 94 71.3
ATR0099G092 Amborella trichopoda HOM05D004198 ORTHO05D006470 1.3e-28 129.8 109 59.6
Glyma.17G044300 Glycine max HOM05D004198 ORTHO05D006470 5.4e-27 124.4 94 66.0
vmacro12815 Vaccinium macrocarpon HOM05D004198 ORTHO05D006470 2.1e-26 122.5 90 67.8
PGSC0003DMG402015935 Solanum tuberosum HOM05D004198 ORTHO05D006470 2.7e-26 122.1 92 66.3
Lsat_1_v5_gn_5_138341 Lactuca sativa HOM05D004198 ORTHO05D006470 6.0e-26 120.9 105 57.1
unitig_22.g6576 Utricularia gibba HOM05D004198 ORTHO05D006470 1.3e-25 119.8 108 56.5
CAN.G86.10 Capsicum annuum HOM05D004198 ORTHO05D006470 3.0e-25 118.6 96 61.5
Mapoly0072s0092 Marchantia polymorpha HOM05D004198 ORTHO05D006470 1.9e-19 99.4 114 47.4
Solyc07g017675.1 Solanum lycopersicum HOM05D004198 ORTHO05D015220 3.2e-19 98.6 84 57.1
Sopen07g006500 Solanum pennellii HOM05D004198 ORTHO05D015220 5.4e-19 97.8 80 60.0
Pp3c27_7000 Physcomitrium patens HOM05D004198 ORTHO05D006470 1.2e-18 96.7 113 47.8
SMO145G0289 Selaginella moellendorffii HOM05D004198 ORTHO05D006470 1.7e-17 92.8 114 42.1
Actinidia33514 Actinidia chinensis HOM05D004198 ORTHO05D015220 4.3e-16 88.2 78 57.7
Zm00001eb257190 Zea mays HOM05D004198 ORTHO05D030652 1.3e-12 76.6 62 61.3
Zm00001eb129630 Zea mays HOM05D004198 ORTHO05D015220 4.9e-12 74.7 56 67.9
Haze_26708 Corylus avellana HOM05D004198 ORTHO05D006470 8.7e-09 63.9 93 37.6
Zm00001eb048040 Zea mays HOM05D004198 ORTHO05D015220 2.8e-07 58.9 47 61.7


User provided reference genes

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