Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 1.0e-263 912.9 475 100.0
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 2.5e-206 722.2 475 78.7
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 7.2e-193 677.6 475 74.9
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 4.2e-177 625.2 474 70.0
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 4.7e-176 621.7 482 69.1
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.6e-174 615.9 484 68.6
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.1e-172 610.5 476 69.1
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 9.7e-166 587.4 476 67.4
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.2e-161 572.4 463 67.0
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 1.2e-155 553.9 475 62.3
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 4.7e-152 542.0 466 61.8
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 1.5e-150 537.0 465 61.9
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 1.3e-146 523.9 465 60.4
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 3.0e-143 512.7 468 61.1
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 4.1e-140 502.3 466 58.6
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 1.6e-139 500.4 471 58.6
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 3.5e-139 499.2 472 59.3
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 1.9e-137 493.4 475 56.6
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 1.6e-136 490.3 475 55.4
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 8.0e-136 488.0 466 58.6
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 2.6e-134 483.0 466 57.3
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 9.2e-132 474.6 472 55.7
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 1.6e-131 473.8 466 56.9
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 1.0e-130 471.1 474 55.7
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 1.5e-129 467.2 466 55.2
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 6.8e-127 458.4 354 68.6
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 2.6e-126 456.4 478 51.7
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 4.4e-126 455.7 412 60.0
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 1.3e-122 444.1 480 51.7
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 1.5e-121 440.7 463 53.1
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 4.3e-121 439.1 480 50.2
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 1.2e-120 437.6 479 50.7
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 2.1e-120 436.8 466 51.1
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 4.7e-120 435.6 463 52.7
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 1.4e-119 434.1 478 52.1
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 3.1e-119 433.0 450 54.4
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 6.8e-119 431.8 485 49.3
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 8.9e-119 431.4 491 49.5
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 5.8e-118 428.7 469 53.5
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 4.9e-117 425.6 471 50.5
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 8.4e-117 424.9 482 50.0
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 8.4e-117 424.9 482 48.8
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 9.2e-116 421.4 470 50.2
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 8.6e-114 414.8 463 51.8
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 1.9e-113 413.7 441 50.8
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 9.6e-113 411.4 460 51.3
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 9.6e-113 411.4 414 53.9
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 1.2e-112 411.0 443 51.5
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 4.7e-112 409.1 490 49.4
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 3.1e-111 406.4 468 49.6
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 3.1e-111 406.4 464 48.9
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 2.0e-110 403.7 471 51.0
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 3.4e-110 402.9 467 49.9
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 7.6e-110 401.7 480 48.5
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 6.4e-109 398.7 465 49.2
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 6.4e-109 398.7 459 49.2
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 1.4e-108 397.5 465 48.0
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 2.4e-108 396.7 491 46.8
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 2.7e-107 393.3 474 47.7
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 3.5e-107 392.9 471 49.0
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 4.6e-107 392.5 476 48.5
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 2.3e-106 390.2 465 49.9
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 6.6e-106 388.7 478 46.2
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 5.6e-105 385.6 311 66.2
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 2.1e-104 383.6 471 49.7
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 2.8e-104 383.3 356 57.3
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 2.8e-104 383.3 436 50.5
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 5.3e-103 379.0 462 45.9
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 5.3e-103 379.0 471 48.4
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 1.2e-102 377.9 468 45.9
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 2.0e-102 377.1 472 48.1
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 2.0e-102 377.1 464 47.0
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 7.6e-102 375.2 472 47.0
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 7.6e-102 375.2 472 47.7
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 9.9e-102 374.8 472 47.7
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 9.9e-102 374.8 336 59.2
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 1.7e-101 374.0 472 47.9
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 3.8e-101 372.9 477 47.2
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 6.4e-101 372.1 471 48.4
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 6.4e-101 372.1 471 47.3
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 8.4e-101 371.7 471 48.2
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 3.2e-100 369.8 476 45.0
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 7.9e-99 365.2 471 47.1
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 2.5e-97 360.1 497 45.5
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 4.3e-97 359.4 470 46.4
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 2.8e-96 356.7 468 47.2
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 5.3e-95 352.4 475 43.2
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 3.4e-94 349.7 425 46.4
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 2.3e-90 337.0 459 45.3
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 5.6e-89 332.4 459 41.0
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 2.8e-88 330.1 452 45.1
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 1.0e-85 321.6 302 55.6
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 1.1e-84 318.2 461 40.6
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 1.9e-84 317.4 329 52.9
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 5.1e-82 309.3 446 42.2
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 1.0e-69 268.5 475 38.1
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 6.1e-67 259.2 367 45.8
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 6.7e-66 255.8 472 36.0
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 1.3e-61 241.5 236 59.7
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.8e-58 231.1 322 42.2
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 5.5e-52 209.5 182 57.7
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 1.2e-41 175.3 153 54.2
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.7e-35 153.3 118 61.0
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.0e-34 150.2 118 60.2
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.0e-34 150.2 118 60.2
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 6.8e-34 149.4 320 35.0
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 6.1e-27 126.3 118 54.2
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 6.1e-27 126.3 78 79.5
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 8.0e-27 125.9 488 28.5
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 5.2e-26 123.2 127 50.4
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 3.5e-22 110.5 203 33.5
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 3.5e-22 110.5 203 33.5
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 2.5e-20 104.4 255 31.4
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 2.5e-20 104.4 135 43.7
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 1.4e-18 98.6 427 24.8
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 9.8e-17 92.4 79 64.6
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 7.0e-15 86.3 55 72.7
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 6.0e-14 83.2 122 37.7
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 2.3e-13 81.3 457 24.1
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 2.3e-13 81.3 132 37.1
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 3.4e-09 67.4 116 32.8
RcHm_v2.0_Chr3g0477111 Rosa chinensis HOM05D006143 ORTHO05D007587 4.9e-08 63.5 36 80.6
SMO117G0244 Selaginella moellendorffii HOM05D006143 ORTHO05D007587 1.9e-07 61.6 125 34.4
arahy.Tifrunner.gnm1.ann1.SUI2IU Arachis hypogaea HOM05D006143 ORTHO05D007587 7.1e-07 59.7 51 56.9
CSS0047646 Camellia sinensis var. sinensis HOM05D000493 ORTHO05D001638 9.2e-07 59.3 60 58.3


User provided reference genes

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