Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 1.3e-124 449.9 251 100.0
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 7.1e-99 364.4 242 82.6
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 3.9e-97 358.6 240 82.5
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 1.6e-95 353.2 242 84.3
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 6.2e-95 351.3 240 82.1
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 8.4e-92 340.9 234 79.5
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 4.6e-90 335.1 240 79.6
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 4.6e-90 335.1 234 73.9
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 2.3e-89 332.8 247 75.7
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 7.3e-88 327.8 240 75.0
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 7.3e-88 327.8 235 72.8
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 4.8e-87 325.1 231 77.5
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 1.1e-86 323.9 248 69.0
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 5.8e-85 318.2 288 63.2
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 1.7e-84 316.6 231 80.1
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 4.9e-84 315.1 273 63.4
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 3.5e-82 308.9 239 77.0
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 6.7e-81 304.7 230 67.4
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 8.7e-81 304.3 240 77.9
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 7.4e-80 301.2 240 71.2
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 9.6e-80 300.8 226 70.8
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 1.6e-79 300.1 232 72.0
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 2.8e-79 299.3 230 77.0
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 6.2e-79 298.1 242 73.1
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 6.2e-79 298.1 225 73.3
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 3.1e-78 295.8 239 75.3
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 3.4e-77 292.4 240 68.8
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 4.5e-77 292.0 219 68.5
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 1.3e-76 290.4 230 70.9
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 1.7e-76 290.0 235 74.0
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 4.9e-76 288.5 227 71.4
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 6.5e-76 288.1 236 66.1
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 1.1e-75 287.3 230 73.0
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 7.1e-75 284.6 242 71.9
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 9.3e-75 284.3 236 66.9
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 3.5e-74 282.3 242 64.0
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 3.5e-74 282.3 242 64.0
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 3.5e-74 282.3 242 64.0
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 3.5e-74 282.3 234 64.1
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 6.0e-74 281.6 234 72.6
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 7.9e-74 281.2 233 66.1
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 7.9e-74 281.2 173 86.7
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 7.9e-74 281.2 236 72.5
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 1.0e-73 280.8 242 63.2
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 1.8e-73 280.0 242 63.6
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 2.3e-73 279.6 240 70.8
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 2.3e-73 279.6 231 69.7
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 3.9e-73 278.9 231 66.7
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 5.1e-73 278.5 251 61.0
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 8.7e-73 277.7 230 64.8
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 8.7e-73 277.7 236 72.5
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 2.5e-72 276.2 234 71.8
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 2.5e-72 276.2 236 60.6
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 3.3e-72 275.8 230 66.1
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 3.3e-72 275.8 231 71.4
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 7.4e-72 274.6 223 74.9
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 2.1e-71 273.1 251 60.2
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 2.8e-71 272.7 221 67.0
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 1.2e-69 267.3 224 72.8
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 1.2e-69 267.3 224 72.8
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 1.2e-69 267.3 240 67.5
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 2.0e-69 266.5 221 71.5
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 2.2e-68 263.1 234 69.2
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 2.9e-68 262.7 214 74.3
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 5.0e-68 261.9 214 75.2
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 5.0e-68 261.9 266 59.8
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 6.5e-68 261.5 246 66.7
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 8.4e-68 261.2 266 59.8
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 2.5e-67 259.6 165 70.9
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 4.2e-67 258.8 282 56.0
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 4.6e-66 255.4 238 61.3
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 7.9e-66 254.6 171 78.9
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 1.3e-65 253.8 169 75.1
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 5.1e-65 251.9 224 70.1
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 5.1e-65 251.9 230 61.3
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 1.9e-64 250.0 240 66.7
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 1.9e-64 250.0 237 65.4
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 1.9e-64 250.0 230 61.7
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 3.3e-64 249.2 231 61.0
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 2.4e-62 243.0 221 61.5
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 3.1e-62 242.7 242 64.5
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 4.1e-62 242.3 222 67.6
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 1.7e-60 236.9 246 56.9
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 1.9e-59 233.4 242 50.0
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 6.1e-58 228.4 232 64.7
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 7.9e-58 228.0 230 59.6
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 3.0e-57 226.1 198 73.2
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 6.7e-57 224.9 226 53.5
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 3.3e-56 222.6 226 63.3
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 5.7e-56 221.9 230 63.0
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 7.4e-56 221.5 199 60.3
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 2.2e-55 219.9 200 59.5
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 1.2e-53 214.2 231 63.2
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 1.3e-52 210.7 201 69.2
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 5.0e-52 208.8 238 57.1
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 8.5e-52 208.0 227 55.1
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 1.9e-51 206.8 214 66.8
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 1.9e-51 206.8 214 66.8
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 2.7e-50 203.0 202 63.4
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 3.6e-50 202.6 242 50.4
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 3.3e-48 196.1 173 61.3
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 8.2e-47 191.4 167 59.3
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 1.0e-41 174.5 234 50.9
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 1.1e-40 171.0 117 66.7
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 4.1e-38 162.5 229 54.6
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 4.5e-37 159.1 144 55.6
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 2.2e-36 156.8 127 70.9
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 1.1e-35 154.5 171 53.2
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 4.0e-33 146.0 235 42.1
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 3.4e-32 142.9 265 39.6
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 4.8e-31 139.0 103 75.7
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 5.9e-29 132.1 115 55.7
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 4.7e-26 122.5 107 69.2
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 5.4e-22 109.0 235 38.3
MD10G1313900 Malus domestica HOM05D006314 ORTHO05D030082 1.6e-18 97.4 57 75.4
Lsat_1_v5_gn_5_88320 Lactuca sativa HOM05D006314 ORTHO05D007970 6.8e-17 92.0 102 45.1
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 1.7e-15 87.4 103 53.4
QL05p075461 Quercus lobata HOM05D006314 ORTHO05D030082 4.9e-15 85.9 53 67.9
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 7.0e-14 82.0 43 83.7
QL08p032503 Quercus lobata HOM05D006314 ORTHO05D030082 1.0e-12 78.2 51 66.7
Sp7g19320 Schrenkiella parvula HOM05D006314 ORTHO05D007970 7.3e-11 72.0 190 30.0
FvH4_3g02750 Fragaria vesca HOM05D006314 ORTHO05D007970 9.8e-08 61.6 70 50.0
MD10G1314000 Malus domestica HOM05D006314 ORTHO05D007970 1.7e-07 60.8 36 75.0


User provided reference genes

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