Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G107000 Prunus persica HOM05D003719 ORTHO05D004116 4.6e-203 711.1 377 100.0
MD07G1081800 Malus domestica HOM05D003719 ORTHO05D004116 5.0e-141 505.0 327 82.3
MD02G1231000 Malus domestica HOM05D003719 ORTHO05D004116 1.9e-140 503.1 329 81.8
RcHm_v2.0_Chr1g0340791 Rosa chinensis HOM05D003719 ORTHO05D004116 2.0e-129 466.5 328 74.7
FAN10G3972 Fragaria x ananassa HOM05D003719 ORTHO05D004116 1.3e-128 463.8 335 73.1
FAN06G0622 Fragaria x ananassa HOM05D003719 ORTHO05D004116 3.7e-128 462.2 358 70.4
FAN03G1006 Fragaria x ananassa HOM05D003719 ORTHO05D004116 6.6e-117 424.9 306 73.2
FvH4_7g08280 Fragaria vesca HOM05D003719 ORTHO05D004116 7.1e-111 404.8 291 72.9
ClCG06G000580 Citrullus lanatus HOM05D003719 ORTHO05D004116 7.2e-87 325.1 327 56.6
Thecc.05G235300 Theobroma cacao HOM05D003719 ORTHO05D004116 5.1e-85 318.9 326 55.2
CsaV3_6G006350 Cucumis sativus L. HOM05D003719 ORTHO05D004116 6.7e-85 318.5 327 56.0
CANSAT25G2268 Cannabis sativa HOM05D003719 ORTHO05D004116 4.3e-84 315.8 330 57.0
Potri.013G070400 Populus trichocarpa HOM05D003719 ORTHO05D004116 5.7e-84 315.5 325 55.7
CiPaw.02G047600 Carya illinoinensis HOM05D003719 ORTHO05D004116 4.8e-83 312.4 326 55.2
MELO3C022484.2 Cucumis melo HOM05D003719 ORTHO05D004116 6.3e-83 312.0 327 55.4
Sed0010466 Sechium edule HOM05D003719 ORTHO05D004116 1.8e-82 310.5 325 55.7
QL04p053441 Quercus lobata HOM05D003719 ORTHO05D004116 2.9e-80 303.1 325 55.1
Manes.09G133700 Manihot esculenta HOM05D003719 ORTHO05D004116 5.0e-80 302.4 332 54.8
Gohir.D11G317400 Gossypium hirsutum HOM05D003719 ORTHO05D004116 1.4e-77 294.3 324 53.7
Gorai.007G347200 Gossypium raimondii HOM05D003719 ORTHO05D004116 1.4e-77 294.3 324 53.7
Duzib128G0107 Durio zibethinus HOM05D003719 ORTHO05D004116 3.9e-77 292.7 324 54.0
Potri.019G044400 Populus trichocarpa HOM05D003719 ORTHO05D004116 5.1e-77 292.4 325 53.5
Gohir.A11G301800 Gossypium hirsutum HOM05D003719 ORTHO05D004116 1.5e-76 290.8 324 52.5
Haze_15777 Corylus avellana HOM05D003719 ORTHO05D004116 1.3e-75 287.7 292 56.5
Duzib177G0203 Durio zibethinus HOM05D003719 ORTHO05D004116 4.2e-71 272.7 312 51.9
Eucgr.E01743 Eucalyptus grandis HOM05D003719 ORTHO05D004116 4.7e-70 269.2 332 51.5
Dinv43958 Davidia involucrata HOM05D003719 ORTHO05D004116 2.3e-69 266.9 336 49.1
Sabra19G0054700 Salix brachista HOM05D003719 ORTHO05D004116 2.3e-69 266.9 317 51.7
Manes.08G156200 Manihot esculenta HOM05D003719 ORTHO05D004116 5.2e-69 265.8 334 50.0
Ciclev10031549m.g Citrus clementina HOM05D003719 ORTHO05D004116 7.4e-68 261.9 325 49.5
Atru.chr2.1627 Acer truncatum HOM05D003719 ORTHO05D004116 9.7e-68 261.5 323 51.1
FAN01G0294 Fragaria x ananassa HOM05D003719 ORTHO05D004116 9.7e-68 261.5 193 69.9
TWI32G1338 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 2.8e-67 260.0 326 50.3
Dinv43515 Davidia involucrata HOM05D003719 ORTHO05D004116 1.4e-66 257.7 310 51.9
Sed0012975 Sechium edule HOM05D003719 ORTHO05D004116 3.5e-65 253.1 329 47.1
TAR629G0070 Trochodendron aralioides HOM05D003719 ORTHO05D004116 3.5e-65 253.1 326 50.0
COL.COLO4_32214 Corchorus olitorius HOM05D003719 ORTHO05D004116 2.9e-64 250.0 305 51.8
TWI60G0027 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 1.2e-62 244.6 324 48.1
Actinidia05832 Actinidia chinensis HOM05D003719 ORTHO05D004116 2.1e-62 243.8 329 46.2
GSVIVG01019328001 Vitis vinifera HOM05D003719 ORTHO05D004116 6.1e-62 242.3 329 48.6
Nn1g09363 Nelumbo nucifera HOM05D003719 ORTHO05D004116 2.3e-61 240.4 331 45.6
Hma1.2p1_0128F.1_g060060 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 1.2e-60 238.0 327 47.1
Actinidia31730 Actinidia chinensis HOM05D003719 ORTHO05D004116 7.5e-60 235.3 330 46.4
Sabra13G0061200 Salix brachista HOM05D003719 ORTHO05D004116 7.5e-60 235.3 292 49.7
MBI04_g06283_MAGBIO Magnolia biondii HOM05D003719 ORTHO05D004116 1.3e-59 234.6 333 45.6
Rhsim07G0047900 Rhododendron simsii HOM05D003719 ORTHO05D004116 1.4e-58 231.1 371 42.3
Cpa.g.sc73.30 Carica papaya HOM05D003719 ORTHO05D004116 5.3e-58 229.2 292 50.7
Glyma.16G079900 Glycine max HOM05D003719 ORTHO05D004116 1.6e-57 227.6 330 45.5
Nitab4.5_0000792g0110 Nicotiana tabacum HOM05D003719 ORTHO05D004116 7.7e-57 225.3 329 44.7
PGR042G1172 Punica granatum HOM05D003719 ORTHO05D004116 5.0e-56 222.6 325 48.0
Lj3g0017682 Lotus japonicus HOM05D003719 ORTHO05D004116 1.9e-55 220.7 323 45.5
Sp6g26530 Schrenkiella parvula HOM05D003719 ORTHO05D004116 4.7e-54 216.1 329 45.6
THA.LOC104820814 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 6.1e-54 215.7 332 44.3
Peaxi162Scf00245g00417 Petunia axillaris HOM05D003719 ORTHO05D004116 1.0e-53 214.9 332 44.3
Carub.0006s1593 Capsella rubella HOM05D003719 ORTHO05D004116 2.6e-52 210.3 331 45.6
CARHR195490 Cardamine hirsuta HOM05D003719 ORTHO05D004116 5.7e-52 209.1 332 43.7
arahy.Tifrunner.gnm1.ann1.N569AS Arachis hypogaea HOM05D003719 ORTHO05D004116 9.8e-52 208.4 326 46.0
AL6G28780 Arabidopsis lyrata HOM05D003719 ORTHO05D004116 1.7e-51 207.6 334 44.3
Cc02_g26500 Coffea canephora HOM05D003719 ORTHO05D004116 8.3e-51 205.3 329 42.6
Thhalv10013571m.g Eutrema salsugineum HOM05D003719 ORTHO05D004116 1.1e-50 204.9 331 43.8
Phvul.009G117500 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 2.4e-50 203.8 323 44.0
MSTRG.4990 Avicennia marina HOM05D003719 ORTHO05D004116 7.0e-50 202.2 333 41.1
Oeu020240.1 Olea europaea HOM05D003719 ORTHO05D004116 7.0e-50 202.2 331 42.6
Nitab4.5_0003123g0030 Nicotiana tabacum HOM05D003719 ORTHO05D004116 1.2e-49 201.4 332 42.5
THA.LOC104802889 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 1.2e-49 201.4 337 42.7
AT5G17690 Arabidopsis thaliana HOM05D003719 ORTHO05D004116 1.6e-49 201.1 334 43.1
arahy.Tifrunner.gnm1.ann1.U92JU2 Arachis hypogaea HOM05D003719 ORTHO05D004116 1.6e-49 201.1 325 45.2
Nitab4.5_0000050g0180 Nicotiana tabacum HOM05D003719 ORTHO05D004116 1.6e-49 201.1 330 42.1
Lalb_Chr07g0194591 Lupinus albus HOM05D003719 ORTHO05D004116 2.0e-49 200.7 326 40.8
Phvul.010G034600 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 4.5e-49 199.5 332 43.4
ClCG05G002450 Citrullus lanatus HOM05D003719 ORTHO05D004116 5.9e-49 199.1 311 45.0
THA.LOC104827246 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 3.8e-48 196.4 329 42.2
AUR62038028 Chenopodium quinoa HOM05D003719 ORTHO05D004116 1.2e-46 191.4 356 39.0
VMungo1309G0350 Vigna mungo HOM05D003719 ORTHO05D004116 1.2e-46 191.4 323 42.1
Sc02g0003460 Simmondsia chinensis HOM05D003719 ORTHO05D004116 2.1e-46 190.7 332 42.2
CsaV3_3G009890 Cucumis sativus L. HOM05D002544 ORTHO05D007277 6.1e-46 189.1 327 41.3
Glyma.03G094200 Glycine max HOM05D003719 ORTHO05D004116 1.4e-45 188.0 318 41.8
PSO017G6528 Papaver somniferum HOM05D003719 ORTHO05D004116 1.4e-45 188.0 348 40.2
C02p09250 Brassica napus HOM05D003719 ORTHO05D004116 1.8e-45 187.6 330 41.2
Migut.N01648 Erythranthe guttata HOM05D003719 ORTHO05D004116 2.3e-45 187.2 337 38.6
Aa31LG11G11940 Aethionema arabicum HOM05D003719 ORTHO05D004116 5.2e-45 186.0 328 43.3
BcaC03g13534 Brassica carinata HOM05D003719 ORTHO05D004116 8.8e-45 185.3 330 40.9
BolC2t06833H Brassica oleracea HOM05D003719 ORTHO05D004116 1.2e-44 184.9 330 40.9
Sopen01g033060 Solanum pennellii HOM05D003719 ORTHO05D004116 1.2e-44 184.9 327 41.3
HanXRQChr04g0117621 Helianthus annuus HOM05D003719 ORTHO05D004116 1.5e-44 184.5 342 38.0
Solyc01g081500.4 Solanum lycopersicum HOM05D003719 ORTHO05D004116 5.7e-44 182.6 327 41.3
TPR.G9787 Trifolium pratense HOM05D003719 ORTHO05D004116 5.7e-44 182.6 344 41.3
vmacro13601 Vaccinium macrocarpon HOM05D003719 ORTHO05D004116 8.3e-43 178.7 359 38.7
Peaxi162Scf00907g00023 Petunia axillaris HOM05D003719 ORTHO05D004116 1.1e-42 178.3 327 39.1
PSO170G0628 Papaver somniferum HOM05D003719 ORTHO05D004116 1.8e-42 177.6 357 39.2
ECA236G3956 Erigeron canadensis HOM05D001257 ORTHO05D005285 2.4e-42 177.2 336 36.9
Lalb_Chr13g0290971 Lupinus albus HOM05D003719 ORTHO05D004116 3.1e-42 176.8 324 39.2
Nitab4.5_0025236g0010 Nicotiana tabacum HOM05D003719 ORTHO05D004116 1.6e-41 174.5 300 41.3
PGSC0003DMG400031112 Solanum tuberosum HOM05D003719 ORTHO05D004116 2.0e-41 174.1 328 40.5
Sed0017190 Sechium edule HOM05D003719 ORTHO05D004116 4.5e-41 172.9 329 41.3
A02p04380 Brassica napus HOM05D003719 ORTHO05D004116 1.3e-40 171.4 322 40.1
Oeu024948.1 Olea europaea HOM05D003719 ORTHO05D004116 1.3e-40 171.4 331 38.4
BraA02t05402Z Brassica rapa HOM05D003719 ORTHO05D004116 2.3e-40 170.6 322 40.1
EL10Ac1g00661 Beta vulgaris HOM05D003719 ORTHO05D004116 8.6e-40 168.7 327 39.8
TPR.G38555 Trifolium pratense HOM05D001257 ORTHO05D005285 8.6e-40 168.7 327 38.8
BcaB08g36751 Brassica carinata HOM05D003719 ORTHO05D004116 1.5e-39 167.9 338 39.1
VMungo0331G0617 Vigna mungo HOM05D003719 ORTHO05D004116 3.3e-39 166.8 305 40.3
Ca_15283_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 4.3e-39 166.4 301 40.5
Ca_15419_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 4.3e-39 166.4 301 40.5
FAN01G0740 Fragaria x ananassa HOM05D003719 ORTHO05D004116 9.5e-39 165.2 110 76.4
Ca_23168_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 2.1e-38 164.1 330 39.1
Ah.05g177100 Amaranthus hybridus HOM05D003719 ORTHO05D004116 2.8e-38 163.7 326 39.0
A10p21730 Brassica napus HOM05D003719 ORTHO05D004116 1.4e-37 161.4 338 38.8
BraA10t44234Z Brassica rapa HOM05D003719 ORTHO05D004116 1.4e-37 161.4 338 38.8
BcaC04g18768 Brassica carinata HOM05D003719 ORTHO05D004116 3.0e-37 160.2 333 37.8
C09p59480 Brassica napus HOM05D003719 ORTHO05D004116 3.0e-37 160.2 333 37.8
BolC9t58786H Brassica oleracea HOM05D003719 ORTHO05D004116 3.0e-37 160.2 333 37.8
Aqoxy7G02508 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 4.0e-37 159.8 333 36.9
HanXRQChr11g0343451 Helianthus annuus HOM05D003719 ORTHO05D004116 5.2e-37 159.5 322 36.6
Hund17170 Selenicereus undatus HOM05D003719 ORTHO05D000105 5.7e-36 156.0 307 37.8
ECA248G2234 Erigeron canadensis HOM05D003719 ORTHO05D004116 7.5e-36 155.6 341 34.6
Hma1.2p1_0462F.1_g158020 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 1.7e-35 154.5 295 41.7
Glyma.04G002100 Glycine max HOM05D003719 ORTHO05D004116 2.2e-35 154.1 324 37.0
Lalb_Chr12g0210141 Lupinus albus HOM05D003719 ORTHO05D004116 2.9e-35 153.7 329 36.5
Lsat_1_v5_gn_1_89600 Lactuca sativa HOM05D003719 ORTHO05D004116 1.4e-34 151.4 335 34.0
Psat5g001120 Pisum sativum HOM05D003719 ORTHO05D004116 4.1e-34 149.8 328 34.1
Glyma.06G001700 Glycine max HOM05D003719 ORTHO05D004116 2.7e-33 147.1 325 36.9
BraA09t37591Z Brassica rapa HOM05D003719 ORTHO05D004116 4.6e-33 146.4 330 38.8
CDE11G0837 Ceratophyllum demersum HOM05D003719 ORTHO05D004116 4.6e-33 146.4 325 36.6
Lalb_Chr23g0264911 Lupinus albus HOM05D003719 ORTHO05D004116 4.6e-33 146.4 320 36.2
Lsat_1_v5_gn_7_34101 Lactuca sativa HOM05D003719 ORTHO05D004116 1.9e-31 141.0 341 33.4
Oeu045633.2 Olea europaea HOM05D003719 ORTHO05D004116 4.7e-30 136.3 297 36.7
Hund26916 Selenicereus undatus HOM05D003719 ORTHO05D004116 8.9e-29 132.1 305 36.4
unitig_0.g1580 Utricularia gibba HOM05D003719 ORTHO05D004116 8.9e-29 132.1 321 33.0
AUR62014507 Chenopodium quinoa HOM05D003719 ORTHO05D004116 2.0e-28 131.0 292 36.0
Os10g0324900 Oryza sativa ssp. japonica HOM05D003719 ORTHO05D004116 4.9e-27 126.3 330 33.6
SGA_v2.0_scaffold4G02229 Striga asiatica HOM05D003719 ORTHO05D004116 4.9e-27 126.3 308 36.7
SGA_v2.0_scaffold95G28748 Striga asiatica HOM05D003719 ORTHO05D004116 4.9e-27 126.3 307 35.5
Migut.O00700 Erythranthe guttata HOM05D003719 ORTHO05D004116 6.4e-27 125.9 172 43.0
PGSC0003DMG400031514 Solanum tuberosum HOM05D003719 ORTHO05D004116 1.4e-26 124.8 430 28.1
ATR0568G049 Amborella trichopoda HOM05D003719 ORTHO05D004116 2.4e-26 124.0 341 32.3
Oeu034882.1 Olea europaea HOM05D003719 ORTHO05D004116 2.4e-26 124.0 230 41.3
Lj9A617T60 Lonicera japonica HOM05D003719 ORTHO05D004116 9.2e-26 122.1 289 36.7
HPP92_020485 Vanilla planifolia HOM05D003719 ORTHO05D004116 2.0e-25 120.9 310 33.2
SHI54853 Sapria himalayana HOM05D003719 ORTHO05D004116 7.8e-25 119.0 296 35.5
Solyc10g024470.3 Solanum lycopersicum HOM05D003719 ORTHO05D004116 1.0e-24 118.6 429 28.4
Oeu032776.1 Olea europaea HOM05D003719 ORTHO05D004116 7.3e-23 112.5 298 33.6
arahy.Tifrunner.gnm1.ann1.E07VAV Arachis hypogaea HOM05D003719 ORTHO05D004116 1.8e-21 107.8 301 32.2
SHI50054 Sapria himalayana HOM05D003719 ORTHO05D004116 3.1e-21 107.1 308 34.7
PSO732G0471 Papaver somniferum HOM05D003719 ORTHO05D004116 4.0e-21 106.7 324 33.6
DCAR_029570 Daucus carota HOM05D003719 ORTHO05D004116 5.2e-21 106.3 316 31.6
SEGI_39270 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 6.8e-21 105.9 400 28.8
BcaB01g04909 Brassica carinata HOM05D003719 ORTHO05D004116 8.3e-19 99.0 326 31.9
Sopen10g009690 Solanum pennellii HOM05D003719 ORTHO05D004116 3.2e-18 97.1 476 24.8
C03p09860 Brassica napus HOM05D003719 ORTHO05D004116 6.0e-17 92.8 320 28.4
Ah.05g177090 Amaranthus hybridus HOM05D000308 ORTHO05D005285 1.0e-16 92.0 294 32.3
A03p08460 Brassica napus HOM05D003719 ORTHO05D004116 3.9e-16 90.1 320 27.5
BraA03t10169Z Brassica rapa HOM05D003719 ORTHO05D004116 3.9e-16 90.1 320 27.5
Mapoly0009s0028 Marchantia polymorpha HOM05D003719 ORTHO05D004116 1.1e-15 88.6 173 41.6
BcaB01g05152 Brassica carinata HOM05D003719 ORTHO05D004116 1.5e-15 88.2 321 29.3
BolC3t13474H Brassica oleracea HOM05D003719 ORTHO05D004116 1.5e-15 88.2 321 29.3
SHI15580 Sapria himalayana HOM05D003719 ORTHO05D004116 2.5e-15 87.4 268 34.3
Pp3c9_6410 Physcomitrium patens HOM05D003719 ORTHO05D004116 9.5e-15 85.5 62 64.5
CAN.G1260.1 Capsicum annuum HOM05D003719 ORTHO05D004116 1.1e-13 82.0 65 61.5
BraA09t38097Z Brassica rapa HOM05D003719 ORTHO05D004116 4.0e-13 80.1 153 41.8
CAN.G1612.6 Capsicum annuum HOM05D003719 ORTHO05D004116 1.5e-12 78.2 87 47.1
Glyma.03G111600 Glycine max HOM05D003719 ORTHO05D004116 2.6e-12 77.4 166 38.0
DCAR_015727 Daucus carota HOM05D003719 ORTHO05D004116 9.2e-10 68.9 208 32.2
PSO732G0498 Papaver somniferum HOM05D003719 ORTHO05D004116 3.0e-08 63.9 292 30.1
PSO732G0548 Papaver somniferum HOM05D003719 ORTHO05D004116 3.0e-08 63.9 292 30.1
Psat4g207560 Pisum sativum HOM05D003719 ORTHO05D004116 6.6e-08 62.8 68 44.1
CAN.G1612.7 Capsicum annuum HOM05D000541 ORTHO05D000137 1.9e-07 61.2 85 40.0
Nn7g37398 Nelumbo nucifera HOM05D003719 ORTHO05D004116 1.9e-07 61.2 35 80.0
Migut.O00699 Erythranthe guttata HOM05D003719 ORTHO05D004116 2.5e-07 60.8 62 50.0
DCAR_025000 Daucus carota HOM05D003719 ORTHO05D004116 3.3e-07 60.5 428 25.2
Lalb_Chr10g0091841 Lupinus albus HOM05D003719 ORTHO05D004116 5.6e-07 59.7 80 42.5
HPP92_026156 Vanilla planifolia HOM05D003719 ORTHO05D004116 9.6e-07 58.9 233 28.3
SHI15577 Sapria himalayana HOM05D003719 ORTHO05D004116 1.6e-06 58.2 31 83.9
Lalb_Chr13g0290921 Lupinus albus HOM05D003719 ORTHO05D004116 2.8e-06 57.4 46 56.5


User provided reference genes

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