Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G473200 Prunus persica HOM05D005914 ORTHO05D007361 3.7e-199 698.0 343 100.0
MD15G1120500 Malus domestica HOM05D005914 ORTHO05D007361 7.8e-157 557.4 318 86.5
RcHm_v2.0_Chr6g0298621 Rosa chinensis HOM05D005914 ORTHO05D007361 2.7e-149 532.3 318 84.6
FvH4_2g29650 Fragaria vesca HOM05D005914 ORTHO05D007361 1.6e-138 496.5 318 79.6
FAN24G3193 Fragaria x ananassa HOM05D005914 ORTHO05D007361 1.6e-138 496.5 318 79.6
QL02p022744 Quercus lobata HOM05D005914 ORTHO05D007361 5.3e-137 491.5 317 78.2
Haze_21570 Corylus avellana HOM05D005914 ORTHO05D007361 1.9e-134 483.0 320 76.6
Cfa013180 Carpinus fangiana HOM05D005914 ORTHO05D007361 1.0e-132 477.2 319 75.5
CiPaw.07G220900 Carya illinoinensis HOM05D005914 ORTHO05D007361 2.5e-131 472.6 319 73.7
TWI63G0300 Tripterygium wilfordii HOM05D005914 ORTHO05D007361 4.0e-129 465.3 316 72.2
CANSAT80G2406 Cannabis sativa HOM05D005914 ORTHO05D007361 9.0e-129 464.2 325 72.9
CANSAT80G0109 Cannabis sativa HOM05D005914 ORTHO05D007361 2.6e-128 462.6 325 72.6
Gohir.A08G236800 Gossypium hirsutum HOM05D005914 ORTHO05D007361 2.6e-128 462.6 320 71.2
Ciclev10008576m.g Citrus clementina HOM05D005914 ORTHO05D007361 7.6e-128 461.1 319 73.0
Gorai.004G274400 Gossypium raimondii HOM05D005914 ORTHO05D007361 2.9e-127 459.1 316 71.2
CSS0046358 Camellia sinensis var. sinensis HOM05D005914 ORTHO05D007361 3.8e-127 458.8 326 72.7
TAR625G1283 Trochodendron aralioides HOM05D005914 ORTHO05D007361 1.9e-126 456.4 321 71.3
Thecc.09G149100 Theobroma cacao HOM05D005914 ORTHO05D007361 5.4e-126 454.9 317 71.6
Manes.16G119400 Manihot esculenta HOM05D005914 ORTHO05D007361 4.6e-125 451.8 325 71.1
Actinidia22373 Actinidia chinensis HOM05D005914 ORTHO05D007361 1.0e-124 450.7 326 71.8
Sabra06G0196100 Salix brachista HOM05D005914 ORTHO05D007361 6.7e-124 448.0 325 71.1
GSVIVG01035808001 Vitis vinifera HOM05D005914 ORTHO05D007361 3.3e-123 445.7 315 70.5
Lj6g0019162 Lotus japonicus HOM05D005914 ORTHO05D007361 7.4e-123 444.5 317 71.9
Potri.006G250800 Populus trichocarpa HOM05D005914 ORTHO05D007361 2.8e-122 442.6 324 70.1
Nn2g11936 Nelumbo nucifera HOM05D005914 ORTHO05D007361 4.8e-122 441.8 311 71.7
Medtr2g009140 Medicago truncatula HOM05D005914 ORTHO05D007361 1.4e-121 440.3 339 67.3
Rhsim02G0194500 Rhododendron simsii HOM05D005914 ORTHO05D007361 1.4e-121 440.3 325 69.8
arahy.Tifrunner.gnm1.ann1.J9LH1L Arachis hypogaea HOM05D005914 ORTHO05D007361 3.1e-121 439.1 320 69.7
Atru.chr7.2376 Acer truncatum HOM05D005914 ORTHO05D007361 4.0e-121 438.7 320 69.7
arahy.Tifrunner.gnm1.ann1.71PCZ9 Arachis hypogaea HOM05D005914 ORTHO05D007361 1.2e-120 437.2 313 70.0
Eucgr.C01789 Eucalyptus grandis HOM05D005914 ORTHO05D007361 3.4e-120 435.6 321 69.5
Lalb_Chr20g0122961 Lupinus albus HOM05D005914 ORTHO05D007361 4.5e-120 435.3 320 69.1
Glyma.15G054900 Glycine max HOM05D005914 ORTHO05D007361 9.9e-120 434.1 317 71.0
THA.LOC104799221 Tarenaya hassleriana HOM05D005914 ORTHO05D007361 1.3e-119 433.7 316 68.7
Thhalv10004397m.g Eutrema salsugineum HOM05D005914 ORTHO05D007361 8.4e-119 431.0 319 69.0
A06p36180 Brassica napus HOM05D005914 ORTHO05D007361 1.4e-118 430.3 314 69.7
Psat1g215880 Pisum sativum HOM05D005914 ORTHO05D007361 3.2e-118 429.1 315 69.8
arahy.Tifrunner.gnm1.ann1.T9E77A Arachis hypogaea HOM05D005914 ORTHO05D007361 5.5e-118 428.3 320 68.8
BraA06t26540Z Brassica rapa HOM05D005914 ORTHO05D007361 7.1e-118 427.9 314 69.4
Ca_00145_v3 Cicer arietinum L. HOM05D005914 ORTHO05D007361 7.1e-118 427.9 320 69.4
C07p42340 Brassica napus HOM05D005914 ORTHO05D007361 1.2e-117 427.2 313 70.0
Sp2g22050 Schrenkiella parvula HOM05D005914 ORTHO05D007361 1.2e-117 427.2 314 68.8
AL6G37280 Arabidopsis lyrata HOM05D005914 ORTHO05D007361 8.7e-116 421.0 311 68.5
Carub.0006s2334 Capsella rubella HOM05D005914 ORTHO05D007361 5.6e-115 418.3 311 67.8
AT5G25480 Arabidopsis thaliana HOM05D005914 ORTHO05D007361 9.6e-115 417.5 311 67.8
Aqoxy7G02060 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 1.6e-114 416.8 315 68.6
VMungo0540G0716 Vigna mungo HOM05D005914 ORTHO05D007361 2.8e-114 416.0 325 67.1
MELO3C011235.2 Cucumis melo HOM05D005914 ORTHO05D007361 4.8e-114 415.2 316 67.7
EL10Ac2g02591 Beta vulgaris HOM05D005914 ORTHO05D007361 8.2e-114 414.5 318 67.3
ClCG08G013130 Citrullus lanatus HOM05D005914 ORTHO05D007361 1.8e-113 413.3 316 68.0
Aa31LG11G4850 Aethionema arabicum HOM05D005914 ORTHO05D007361 5.3e-113 411.8 312 67.0
PGR142G2371 Punica granatum HOM05D005914 ORTHO05D007361 9.0e-113 411.0 318 68.6
Migut.E01476 Erythranthe guttata HOM05D005914 ORTHO05D007361 3.8e-111 405.6 322 64.6
PSO170G3156 Papaver somniferum HOM05D005914 ORTHO05D007361 3.2e-110 402.5 322 65.2
Duzib150G0329 Durio zibethinus HOM05D005914 ORTHO05D007361 4.6e-109 398.7 318 64.8
HanXRQChr13g0402741 Helianthus annuus HOM05D005914 ORTHO05D007361 7.9e-109 397.9 321 63.6
Cc11_g01820 Coffea canephora HOM05D005914 ORTHO05D007361 1.0e-108 397.5 324 62.0
Solyc08g067070.3 Solanum lycopersicum HOM05D005914 ORTHO05D007361 1.3e-108 397.1 328 62.8
Sopen08g021020 Solanum pennellii HOM05D005914 ORTHO05D007361 2.3e-108 396.4 328 62.5
CAN.G98.27 Capsicum annuum HOM05D005914 ORTHO05D007361 3.0e-108 396.0 319 63.0
Gohir.D08G257400 Gossypium hirsutum HOM05D005914 ORTHO05D007361 5.1e-108 395.2 316 64.2
SGA_v2.0_scaffold4G02186 Striga asiatica HOM05D005914 ORTHO05D007361 1.9e-107 393.3 325 62.8
Phvul.006G205000 Phaseolus vulgaris HOM05D005914 ORTHO05D007361 9.7e-107 391.0 293 68.6
DCAR_006234 Daucus carota HOM05D005914 ORTHO05D007361 7.7e-104 381.3 373 55.0
CDE04G0852 Ceratophyllum demersum HOM05D005914 ORTHO05D007361 2.2e-103 379.8 326 61.0
COL.COLO4_23983 Corchorus olitorius HOM05D005914 ORTHO05D007361 2.2e-103 379.8 320 63.4
ECA233G4604 Erigeron canadensis HOM05D005914 ORTHO05D007361 1.4e-102 377.1 310 62.9
Nitab4.5_0000151g0200 Nicotiana tabacum HOM05D005914 ORTHO05D007361 5.5e-102 375.2 328 60.1
Lsat_1_v5_gn_6_22181 Lactuca sativa HOM05D005914 ORTHO05D007361 1.4e-100 370.5 310 62.3
Nitab4.5_0001669g0040 Nicotiana tabacum HOM05D005914 ORTHO05D007361 3.9e-100 369.0 324 60.5
Sed0010731 Sechium edule HOM05D005914 ORTHO05D007361 5.1e-100 368.6 291 64.3
HPP92_012620 Vanilla planifolia HOM05D005914 ORTHO05D007361 2.2e-98 363.2 345 57.1
Dinv11618 Davidia involucrata HOM05D005914 ORTHO05D007361 1.4e-97 360.5 259 71.0
unitig_747.g21653 Utricularia gibba HOM05D005914 ORTHO05D007361 5.0e-95 352.1 330 56.4
BolC7t44763H Brassica oleracea HOM05D005914 ORTHO05D007361 1.1e-94 350.9 276 66.3
FAN27G2538 Fragaria x ananassa HOM05D005914 ORTHO05D007361 6.7e-92 341.7 328 61.6
Zm00001eb358040 Zea mays HOM05D005914 ORTHO05D007361 6.7e-92 341.7 326 57.4
AUR62024878 Chenopodium quinoa HOM05D005914 ORTHO05D007361 2.8e-90 336.3 276 64.1
SalBow2G3472 Salvia bowleyana HOM05D005914 ORTHO05D007361 1.1e-89 334.3 317 58.7
TPR.G25250 Trifolium pratense HOM05D005914 ORTHO05D008190 3.1e-89 332.8 247 67.6
Peaxi162Scf00341g00624 Petunia axillaris HOM05D005914 ORTHO05D007361 1.5e-88 330.5 279 61.3
MD08G1143700 Malus domestica HOM05D005914 ORTHO05D007361 4.8e-82 308.9 229 70.3
Pp3c12_2410 Physcomitrium patens HOM05D005914 ORTHO05D007361 2.5e-78 296.6 371 46.1
MSTRG.13986 Avicennia marina HOM05D005914 ORTHO05D007361 4.7e-77 292.4 243 61.7
FAN20G2480 Fragaria x ananassa HOM05D005914 ORTHO05D007361 1.5e-75 287.3 325 53.5
Mapoly0011s0185 Marchantia polymorpha HOM05D005914 ORTHO05D007361 4.4e-75 285.8 391 43.0
MBI04_g29855_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 2.8e-74 283.1 272 59.2
MD15G1439700 Malus domestica HOM05D005914 ORTHO05D007361 3.7e-74 282.7 200 74.0
CsaV3_2G031850 Cucumis sativus L. HOM05D005914 ORTHO05D007361 1.1e-73 281.2 321 51.1
SMO146G0196 Selaginella moellendorffii HOM05D005914 ORTHO05D007361 1.6e-72 277.3 317 49.5
RcHm_v2.0_Chr1g0355831 Rosa chinensis HOM05D005914 ORTHO05D007361 4.5e-72 275.8 245 62.4
ATR0815G040 Amborella trichopoda HOM05D005914 ORTHO05D007361 6.1e-69 265.4 284 51.4
AUR62030669 Chenopodium quinoa HOM05D005914 ORTHO05D007361 4.5e-64 249.2 282 52.5
PSO455G0041 Papaver somniferum HOM05D005914 ORTHO05D007361 7.2e-62 241.9 219 60.3
Hma1.2p1_0000F.1_g000780 Hydrangea macrophylla HOM05D005914 ORTHO05D007361 5.2e-60 235.7 218 60.1
CBR_g3173 Chara braunii HOM05D005914 ORTHO05D007361 1.3e-58 231.1 478 34.7
PRCOL_00003212 Prasinoderma coloniale HOM05D005914 ORTHO05D007361 1.3e-50 204.5 352 36.4
Glyma.08G177800 Glycine max HOM05D005914 ORTHO05D007361 1.7e-50 204.1 197 55.8
MBI04_g46184_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 6.6e-47 192.2 260 48.8
Os01g0612000 Oryza sativa ssp. japonica HOM05D005914 ORTHO05D007361 1.1e-46 191.4 229 48.9
MCO14G456 Micromonas commoda HOM05D005914 ORTHO05D007361 2.5e-46 190.3 327 37.6
CARHR187910 Cardamine hirsuta HOM05D005914 ORTHO05D007361 9.8e-43 178.3 102 80.4
Lj7C718G14 Lonicera japonica HOM05D005914 ORTHO05D007361 1.7e-42 177.6 225 47.1
Cpa.g.sc91.41 Carica papaya HOM05D005914 ORTHO05D007361 9.2e-41 171.8 124 69.4
AagrBONN_evm.TU.Sc2ySwM_228.810 Anthoceros agrestis HOM05D005914 ORTHO05D007361 1.2e-40 171.4 230 43.5
SEGI_35502 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 8.1e-37 158.7 126 63.5
Nitab4.5_0003498g0080 Nicotiana tabacum HOM05D005914 ORTHO05D007361 1.3e-34 151.4 316 37.3
Ah.12g063960 Amaranthus hybridus HOM05D005914 ORTHO05D007361 3.2e-33 146.7 89 77.5
MCO11G560 Micromonas commoda HOM05D005914 ORTHO05D007361 1.6e-32 144.4 326 31.3
Oeu033137.1 Olea europaea HOM05D005914 ORTHO05D007361 5.6e-30 136.0 84 76.2
Sc09g0008580 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.2e-27 128.3 80 73.8
Sc09g0008450 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.1e-25 121.7 80 73.8
TPR.G22731 Trifolium pratense HOM05D005914 ORTHO05D007361 6.0e-24 115.9 70 81.4
CAN.G374.12 Capsicum annuum HOM05D005914 ORTHO05D007361 4.8e-21 106.3 122 48.4
MD08G1143600 Malus domestica HOM05D005914 ORTHO05D007361 9.0e-20 102.1 67 74.6
Cre12.g484600 Chlamydomonas reinhardtii HOM05D005914 ORTHO05D007361 2.6e-19 100.5 104 47.1
SEGI_14251 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 1.2e-16 91.7 62 69.4
Sc09g0008460 Simmondsia chinensis HOM05D005914 ORTHO05D007361 4.0e-12 76.6 104 39.4
Ah.12g063950 Amaranthus hybridus HOM05D005914 ORTHO05D007361 7.6e-11 72.4 127 37.0
Sc09g0008600 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.1e-09 68.6 43 74.4
MD08G1143500 Malus domestica HOM05D005914 ORTHO05D007361 7.9e-08 62.4 70 51.4
Glyma.08G177700 Glycine max HOM05D005914 ORTHO05D007361 1.0e-07 62.0 30 90.0
Lj7A718T66 Lonicera japonica HOM05D005914 ORTHO05D007361 1.0e-07 62.0 61 55.7
Ah.12g063940 Amaranthus hybridus HOM05D005914 ORTHO05D007361 5.6e-06 56.2 67 44.8


User provided reference genes

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