Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 4.1e-284 980.7 492 100.0
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 2.1e-211 739.2 477 78.6
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 6.7e-178 627.9 475 68.0
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 5.7e-161 571.6 457 63.5
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 5.7e-161 571.6 503 60.6
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 2.8e-147 526.2 475 58.9
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 9.8e-145 517.7 465 60.0
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 2.4e-143 513.1 474 58.6
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 1.6e-142 510.4 477 57.7
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.0e-141 507.7 486 58.6
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 8.6e-141 504.6 457 59.3
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 1.5e-140 503.8 463 57.7
RcHm_v2.0_Chr4g0443691 Rosa chinensis HOM05D006564 ORTHO05D007772 3.3e-140 502.7 332 75.9
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 1.1e-138 497.7 476 56.1
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 1.9e-135 486.9 473 56.4
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 9.2e-135 484.6 469 55.7
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 1.6e-134 483.8 481 55.1
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 2.1e-134 483.4 463 55.5
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 2.3e-133 479.9 478 55.4
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 1.1e-130 471.1 501 51.9
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 2.3e-130 469.9 478 55.0
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 8.9e-130 468.0 474 54.2
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 2.0e-129 466.8 490 52.4
FAN17G1546 Fragaria x ananassa HOM05D006564 ORTHO05D007772 3.7e-128 462.6 335 70.7
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 1.1e-127 461.1 473 53.3
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 4.1e-127 459.1 492 52.0
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 1.1e-124 451.1 488 51.0
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 5.2e-122 442.2 472 50.6
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 7.6e-121 438.3 473 51.6
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 7.6e-121 438.3 463 51.4
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 8.4e-120 434.9 467 51.0
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 4.2e-119 432.6 376 60.6
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 5.4e-119 432.2 465 51.4
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 7.1e-119 431.8 470 49.4
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 1.2e-118 431.0 478 49.0
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 1.0e-117 427.9 469 49.9
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 6.6e-117 425.2 472 48.3
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 1.3e-115 421.0 461 48.8
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 2.8e-115 419.9 474 48.1
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 1.4e-114 417.5 459 48.8
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 3.1e-114 416.4 468 48.3
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 1.5e-113 414.1 468 48.1
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 1.5e-113 414.1 476 48.5
Cfa009164 Carpinus fangiana HOM05D006564 ORTHO05D007772 3.4e-113 412.9 356 61.0
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 9.9e-113 411.4 469 48.4
Manes.13G029100 Manihot esculenta HOM05D006564 ORTHO05D007772 4.9e-112 409.1 366 58.2
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 6.4e-112 408.7 476 48.1
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 3.5e-110 402.9 496 47.0
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 6.0e-110 402.1 461 46.9
Thecc.02G252200 Theobroma cacao HOM05D006564 ORTHO05D007772 7.8e-110 401.7 335 60.0
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 2.3e-109 400.2 503 46.3
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 8.7e-109 398.3 472 46.6
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 2.6e-105 386.7 496 45.6
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 4.9e-104 382.5 473 45.9
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 6.0e-102 375.6 473 44.8
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 2.3e-101 373.6 490 45.7
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 3.9e-101 372.9 476 47.3
Actinidia01701 Actinidia chinensis HOM05D006564 ORTHO05D007772 8.1e-99 365.2 334 59.0
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 4.0e-98 362.8 483 44.3
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 1.4e-95 354.4 501 42.9
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 3.0e-93 346.7 486 42.4
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 8.7e-93 345.1 464 45.7
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 2.1e-91 340.5 484 44.6
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 2.8e-91 340.1 477 44.2
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 1.1e-90 338.2 432 46.5
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 1.8e-90 337.4 482 43.8
Lalb_Chr05g0216821 Lupinus albus HOM05D006564 ORTHO05D007772 3.1e-90 336.7 342 54.4
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 6.5e-88 328.9 499 42.3
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 2.5e-87 327.0 551 40.1
Sabra10G0025500 Salix brachista HOM05D006564 ORTHO05D007772 1.3e-83 314.7 455 42.6
Lsat_1_v5_gn_4_5380 Lactuca sativa HOM05D006564 ORTHO05D007772 3.8e-80 303.1 361 48.5
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 1.0e-77 295.0 434 41.7
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 1.4e-74 284.6 388 42.5
Hund06003 Selenicereus undatus HOM05D006564 ORTHO05D007772 2.9e-72 276.9 335 46.3
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 6.1e-70 269.2 476 38.0
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 1.0e-69 268.5 481 38.3
Ca_03150_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 2.1e-62 244.2 219 57.5
Migut.E00617 Erythranthe guttata HOM05D006564 ORTHO05D007772 2.2e-59 234.2 241 51.9
Sc04g0009220 Simmondsia chinensis HOM05D006564 ORTHO05D007772 4.8e-59 233.0 392 37.2
Glyma.02G035501 Glycine max HOM05D006564 ORTHO05D007772 9.1e-58 228.8 229 53.7
Sopen06g024060 Solanum pennellii HOM05D006564 ORTHO05D007772 7.2e-55 219.2 251 49.0
unitig_744.g23977 Utricularia gibba HOM05D006564 ORTHO05D007772 1.2e-52 211.8 466 36.1
Lj3A1053G47 Lonicera japonica HOM05D006564 ORTHO05D007772 4.8e-51 206.5 189 56.1
RcHm_v2.0_Chr4g0443681 Rosa chinensis HOM05D006564 ORTHO05D007772 4.1e-50 203.4 132 75.0
FAN22G1362 Fragaria x ananassa HOM05D006564 ORTHO05D007772 2.3e-45 187.6 132 70.5
Nitab4.5_0003128g0060 Nicotiana tabacum HOM05D006564 ORTHO05D007772 2.4e-42 177.6 344 34.6
PGSC0003DMG401026086 Solanum tuberosum HOM05D006564 ORTHO05D007772 1.2e-41 175.3 322 38.5
Zm00001eb227420 Zea mays HOM05D006564 ORTHO05D007772 6.6e-40 169.5 258 39.5
FAN12G0482 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.6e-38 164.9 132 63.6
Lj3A1053T43 Lonicera japonica HOM05D006564 ORTHO05D007772 4.0e-37 160.2 141 57.4
HanXRQChr12g0383581 Helianthus annuus HOM05D006564 ORTHO05D007772 4.6e-33 146.7 183 45.4
TAR374G1125 Trochodendron aralioides HOM05D006564 ORTHO05D007772 2.9e-32 144.1 213 42.3
Lalb_Chr05g0216811 Lupinus albus HOM05D006564 ORTHO05D007772 1.9e-31 141.4 120 55.0
Hund06002 Selenicereus undatus HOM05D006564 ORTHO05D007772 8.0e-30 136.0 134 51.5
ATR1091G047 Amborella trichopoda HOM05D006564 ORTHO05D007772 3.1e-29 134.0 186 40.3
Cpa.g.sc69.59 Carica papaya HOM05D006564 ORTHO05D007772 8.9e-29 132.5 138 52.2
ClCG08G018020 Citrullus lanatus HOM05D006564 ORTHO05D007772 8.6e-24 115.9 135 45.9
Eucgr.H02586 Eucalyptus grandis HOM05D006564 ORTHO05D007772 8.6e-24 115.9 116 48.3
Actinidia01700 Actinidia chinensis HOM05D006564 ORTHO05D007772 1.1e-21 109.0 142 43.7
SHI17547 Sapria himalayana HOM05D006564 ORTHO05D007772 2.4e-18 97.8 66 66.7
Ca_03152_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 9.2e-18 95.9 73 63.0
CDE07G0681 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 2.7e-17 94.4 289 26.3
SHI17545 Sapria himalayana HOM05D006564 ORTHO05D007772 7.8e-17 92.8 107 46.7
AagrBONN_evm.TU.Sc2ySwM_362.2494 Anthoceros agrestis HOM05D006564 ORTHO05D007772 3.9e-16 90.5 492 24.0
Mapoly0088s0064 Marchantia polymorpha HOM05D006564 ORTHO05D007772 1.9e-15 88.2 426 23.2
FvH4_4g34180 Fragaria vesca HOM05D006564 ORTHO05D007772 2.5e-15 87.8 132 41.7
SEGI_36736 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 1.8e-13 81.6 93 37.6
Gohir.D06G182100 Gossypium hirsutum HOM05D006564 ORTHO05D007772 5.2e-13 80.1 62 64.5
SHI17558 Sapria himalayana HOM05D006564 ORTHO05D007772 3.4e-12 77.4 66 56.1
CBR_g8804 Chara braunii HOM05D006564 ORTHO05D007772 9.9e-12 75.9 189 30.2
HanXRQChr12g0383591 Helianthus annuus HOM05D006564 ORTHO05D007772 2.2e-11 74.7 65 58.5
CDE06G0043 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 1.1e-10 72.4 82 46.3
Migut.E00618 Erythranthe guttata HOM05D006564 ORTHO05D007772 1.0e-08 65.9 77 50.6
Gohir.1Z049603 Gossypium hirsutum HOM05D006564 ORTHO05D007772 3.0e-08 64.3 83 48.2
SEGI_21655 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 2.5e-07 61.2 163 27.6
COL.COLO4_10269 Corchorus olitorius HOM05D006564 ORTHO05D007772 5.6e-07 60.1 33 78.8
HPP92_021828 Vanilla planifolia HOM05D006564 ORTHO05D007772 2.8e-06 57.8 80 35.0
Gohir.A02G066401 Gossypium hirsutum HOM05D020837 ORTHO05D007772 4.7e-06 57.0 39 66.7


User provided reference genes

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