Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G162300 Prunus persica HOM05D005328 ORTHO05D006049 1.2e-137 493.4 303 100.0
Prupe.1G161200 Prunus persica HOM05D005328 ORTHO05D006049 3.9e-67 259.2 264 63.6
TAR626G1462 Trochodendron aralioides HOM05D005328 ORTHO05D006049 2.0e-47 193.7 178 64.0
Rhsim13G0137800 Rhododendron simsii HOM05D005328 ORTHO05D006049 2.6e-47 193.4 345 41.7
Ca_00786_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 3.4e-47 193.0 167 67.7
Ca_11373_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 3.4e-47 193.0 167 67.7
Glyma.09G018000 Glycine max HOM05D005328 ORTHO05D006049 1.3e-46 191.0 214 56.5
Lalb_Chr15g0088491 Lupinus albus HOM05D005328 ORTHO05D006049 3.8e-46 189.5 168 63.7
CSS0022453 Camellia sinensis var. sinensis HOM05D005328 ORTHO05D006049 4.9e-46 189.1 170 64.7
Glyma.15G123900 Glycine max HOM05D005328 ORTHO05D006049 4.9e-46 189.1 211 55.0
vmacro03583 Vaccinium macrocarpon HOM05D005328 ORTHO05D006049 4.9e-46 189.1 216 53.7
CiPaw.10G085200 Carya illinoinensis HOM05D005328 ORTHO05D006049 8.4e-46 188.3 174 63.8
FvH4_4g13451 Fragaria vesca HOM05D005328 ORTHO05D006049 8.4e-46 188.3 238 51.3
FAN12G3626 Fragaria x ananassa HOM05D005328 ORTHO05D006049 8.4e-46 188.3 238 51.3
MD04G1014200 Malus domestica HOM05D005328 ORTHO05D006049 8.4e-46 188.3 457 44.6
Lj6g0010372 Lotus japonicus HOM05D005328 ORTHO05D006049 1.4e-45 187.6 169 64.5
VMungo0540G0318 Vigna mungo HOM05D005328 ORTHO05D006049 3.2e-45 186.4 210 55.7
Actinidia02271 Actinidia chinensis HOM05D005328 ORTHO05D006049 5.4e-45 185.7 165 64.2
Dinv04372 Davidia involucrata HOM05D005328 ORTHO05D006049 5.4e-45 185.7 185 58.9
TPR.G10498 Trifolium pratense HOM05D005328 ORTHO05D006049 9.3e-45 184.9 167 64.7
Hma1.2p1_0391F.1_g142830 Hydrangea macrophylla HOM05D005328 ORTHO05D006049 1.2e-44 184.5 191 59.2
Sc13g0008540 Simmondsia chinensis HOM05D005328 ORTHO05D006049 1.2e-44 184.5 343 45.8
SGA_v2.0_scaffold7G03648 Striga asiatica HOM05D005328 ORTHO05D006049 1.2e-44 184.5 179 58.7
unitig_748.g7855 Utricularia gibba HOM05D005328 ORTHO05D006049 1.2e-44 184.5 167 64.7
GSVIVG01018754001 Vitis vinifera HOM05D005328 ORTHO05D006049 1.2e-44 184.5 177 65.0
Psat1g170800 Pisum sativum HOM05D005328 ORTHO05D006049 2.7e-44 183.3 209 55.5
ClCG07G017100 Citrullus lanatus HOM05D005328 ORTHO05D006049 6.0e-44 182.2 165 60.6
Cc09_g00040 Coffea canephora HOM05D005328 ORTHO05D006049 7.9e-44 181.8 185 58.4
FAN22G2230 Fragaria x ananassa HOM05D005328 ORTHO05D006049 7.9e-44 181.8 218 53.7
Phvul.006G134100 Phaseolus vulgaris HOM05D005328 ORTHO05D006049 7.9e-44 181.8 212 53.8
Hund04726 Selenicereus undatus HOM05D005328 ORTHO05D006049 7.9e-44 181.8 203 56.2
MELO3C017635.2 Cucumis melo HOM05D005328 ORTHO05D006049 2.3e-43 180.3 165 59.4
CsaV3_4G004310 Cucumis sativus L. HOM05D005328 ORTHO05D006049 2.3e-43 180.3 165 59.4
Medtr2g028200 Medicago truncatula HOM05D005328 ORTHO05D006049 5.1e-43 179.1 210 54.3
Aqoxy6G01137 Aquilegia oxysepala HOM05D005328 ORTHO05D006049 6.7e-43 178.7 173 61.3
Migut.M01485 Erythranthe guttata HOM05D005328 ORTHO05D006049 1.1e-42 177.9 165 60.0
DCAR_022839 Daucus carota HOM05D005328 ORTHO05D006049 1.9e-42 177.2 165 61.2
Sed0006700 Sechium edule HOM05D005328 ORTHO05D006049 2.5e-42 176.8 192 54.7
Nitab4.5_0002880g0010 Nicotiana tabacum HOM05D005328 ORTHO05D006049 7.4e-42 175.3 316 51.3
FAN07G1972 Fragaria x ananassa HOM05D005328 ORTHO05D006049 1.3e-41 174.5 238 49.6
Lsat_1_v5_gn_4_65161 Lactuca sativa HOM05D005328 ORTHO05D006049 1.3e-41 174.5 194 54.6
HanXRQChr17g0558521 Helianthus annuus HOM05D005328 ORTHO05D006049 3.7e-41 172.9 182 56.0
CDE03G0050 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 4.8e-41 172.6 173 60.1
FAN17G2578 Fragaria x ananassa HOM05D005328 ORTHO05D006049 4.8e-41 172.6 238 48.3
Nitab4.5_0005721g0030 Nicotiana tabacum HOM05D005328 ORTHO05D006049 4.8e-41 172.6 322 47.2
AUR62021212 Chenopodium quinoa HOM05D005328 ORTHO05D006049 6.2e-41 172.2 191 54.5
Sopen02g029040 Solanum pennellii HOM05D005328 ORTHO05D006049 6.2e-41 172.2 192 55.2
Oeu016925.1 Olea europaea HOM05D005328 ORTHO05D006049 1.4e-40 171.0 169 60.4
PGR042G0801 Punica granatum HOM05D005328 ORTHO05D006049 1.4e-40 171.0 207 51.7
arahy.Tifrunner.gnm1.ann1.B05UD4 Arachis hypogaea HOM05D005328 ORTHO05D006049 2.4e-40 170.2 165 57.6
arahy.Tifrunner.gnm1.ann1.QMQM64 Arachis hypogaea HOM05D005328 ORTHO05D006049 2.4e-40 170.2 165 57.6
EL10Ac3g05669 Beta vulgaris HOM05D005328 ORTHO05D006049 2.4e-40 170.2 198 53.0
PGSC0003DMG400003630 Solanum tuberosum HOM05D005328 ORTHO05D006049 3.1e-40 169.9 183 56.8
TWI63G1825 Tripterygium wilfordii HOM05D005328 ORTHO05D006049 3.1e-40 169.9 172 58.7
CAN.G2049.4 Capsicum annuum HOM05D005328 ORTHO05D006049 4.0e-40 169.5 336 47.3
Duzib151G0457 Durio zibethinus HOM05D005328 ORTHO05D006049 4.0e-40 169.5 179 58.7
PSO017G7149 Papaver somniferum HOM05D005328 ORTHO05D006049 5.3e-40 169.1 167 57.5
PSO170G6444 Papaver somniferum HOM05D005328 ORTHO05D006049 6.9e-40 168.7 167 56.9
Eucgr.E04239 Eucalyptus grandis HOM05D005328 ORTHO05D006049 9.0e-40 168.3 362 39.5
QL05p066147 Quercus lobata HOM05D005328 ORTHO05D006049 9.0e-40 168.3 171 60.2
Thecc.04G160200 Theobroma cacao HOM05D005328 ORTHO05D006049 9.0e-40 168.3 349 42.4
Gorai.005G008200 Gossypium raimondii HOM05D005328 ORTHO05D006049 1.2e-39 167.9 179 58.1
Gohir.A02G007200 Gossypium hirsutum HOM05D005328 ORTHO05D006049 2.0e-39 167.2 179 58.1
Cpa.g.sc53.124 Carica papaya HOM05D005328 ORTHO05D006049 2.6e-39 166.8 194 54.1
Solyc02g084340.3 Solanum lycopersicum HOM05D005328 ORTHO05D006049 2.6e-39 166.8 183 56.3
SalBow8G1780 Salvia bowleyana HOM05D005328 ORTHO05D006049 3.4e-39 166.4 171 57.9
Manes.03G095600 Manihot esculenta HOM05D005328 ORTHO05D006049 4.5e-39 166.0 216 51.4
RcHm_v2.0_Chr4g0414011 Rosa chinensis HOM05D005328 ORTHO05D006049 5.8e-39 165.6 217 53.0
COL.COLO4_12851 Corchorus olitorius HOM05D005328 ORTHO05D006049 7.6e-39 165.2 361 42.9
Gohir.D02G007001 Gossypium hirsutum HOM05D005328 ORTHO05D006049 7.6e-39 165.2 179 57.5
HPP92_007484 Vanilla planifolia HOM05D005328 ORTHO05D006049 9.9e-39 164.9 324 42.0
Ciclev10015350m.g Citrus clementina HOM05D005328 ORTHO05D006049 2.2e-38 163.7 344 41.3
ECA234G3238 Erigeron canadensis HOM05D005328 ORTHO05D006049 2.2e-38 163.7 186 54.8
Sabra06G0000700 Salix brachista HOM05D005328 ORTHO05D006049 1.1e-37 161.4 196 52.6
THA.LOC104798630 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 1.4e-37 161.0 221 48.9
THA.LOC104804861 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 1.4e-37 161.0 221 48.9
THA.LOC104807080 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 1.4e-37 161.0 221 48.9
Atru.chr1.2204 Acer truncatum HOM05D005328 ORTHO05D006049 4.2e-37 159.5 183 53.6
Aa31LG1G25860 Aethionema arabicum HOM05D005328 ORTHO05D006049 1.6e-36 157.5 196 50.5
Ah.07g207330 Amaranthus hybridus HOM05D005328 ORTHO05D002024 4.6e-36 156.0 250 44.4
Sp4g26280 Schrenkiella parvula HOM05D005328 ORTHO05D006049 4.6e-36 156.0 193 51.3
Potri.006G000200 Populus trichocarpa HOM05D005328 ORTHO05D006049 7.9e-36 155.2 195 51.3
SEGI_06923 Sequoiadendron giganteum HOM05D005328 ORTHO05D006049 1.3e-35 154.5 174 55.7
AT2G44200 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 1.8e-35 154.1 167 56.3
Carub.0004s2678 Capsella rubella HOM05D005328 ORTHO05D006049 5.1e-35 152.5 167 55.1
AL4G43160 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 6.7e-35 152.1 167 55.7
BcaB02g08879 Brassica carinata HOM05D005328 ORTHO05D006049 8.7e-35 151.8 209 49.3
C03p29470 Brassica napus HOM05D005328 ORTHO05D006049 1.5e-34 151.0 219 47.0
BcaC01g05181 Brassica carinata HOM05D005328 ORTHO05D006049 3.3e-34 149.8 219 46.6
BcaB01g03324 Brassica carinata HOM05D005328 ORTHO05D006049 4.3e-34 149.4 167 54.5
A03p24730 Brassica napus HOM05D005328 ORTHO05D006049 9.6e-34 148.3 217 47.0
BraA03t11679Z Brassica rapa HOM05D005328 ORTHO05D006049 9.6e-34 148.3 217 47.0
CARHR139360 Cardamine hirsuta HOM05D005328 ORTHO05D006049 9.6e-34 148.3 194 49.0
Peaxi162Scf00083g00091 Petunia axillaris HOM05D005328 ORTHO05D006049 9.6e-34 148.3 177 52.5
A05p04290 Brassica napus HOM05D005328 ORTHO05D006049 2.8e-33 146.7 209 47.4
BraA05t19414Z Brassica rapa HOM05D005328 ORTHO05D006049 2.8e-33 146.7 188 49.5
BcaC02g12330 Brassica carinata HOM05D005328 ORTHO05D006049 6.2e-33 145.6 355 43.7
Thhalv10001457m.g Eutrema salsugineum HOM05D005328 ORTHO05D006049 6.2e-33 145.6 169 52.7
C04p05070 Brassica napus HOM05D005328 ORTHO05D006049 1.1e-32 144.8 211 46.9
Os08g0500200 Oryza sativa ssp. japonica HOM05D005328 ORTHO05D006049 1.5e-31 141.0 175 48.6
BolC3t15295H Brassica oleracea HOM05D005328 ORTHO05D006049 1.0e-30 138.3 249 41.0
AagrBONN_evm.TU.Sc2ySwM_228.5016 Anthoceros agrestis HOM05D005328 ORTHO05D006049 1.3e-30 137.9 197 46.2
Pp3c3_9980 Physcomitrium patens HOM05D005328 ORTHO05D006049 3.8e-30 136.3 170 47.6
Mapoly0104s0032 Marchantia polymorpha HOM05D005328 ORTHO05D006049 4.8e-25 119.4 170 45.3
SMO143G0138 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 9.0e-24 115.2 163 44.8
AT2G44195 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 5.5e-21 105.9 129 47.3
CBR_g2953 Chara braunii HOM05D005328 ORTHO05D006049 9.4e-21 105.1 188 39.4
AUR62016004 Chenopodium quinoa HOM05D005328 ORTHO05D006049 1.8e-19 100.9 81 71.6
Carub.0004s2677 Capsella rubella HOM05D005328 ORTHO05D006049 2.3e-19 100.5 162 42.6
Nn1g08402 Nelumbo nucifera HOM05D005328 ORTHO05D006049 1.5e-18 97.8 105 57.1
AUR62016005 Chenopodium quinoa HOM05D005328 ORTHO05D006049 8.2e-17 92.0 94 55.3
Zm00001eb097520 Zea mays HOM05D005328 ORTHO05D006049 1.1e-16 91.7 109 51.4
AL4G43150 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 1.8e-16 90.9 154 40.9
CDE06G1717 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 7.7e-15 85.5 109 49.5
TAR371G0561 Trochodendron aralioides HOM05D005328 ORTHO05D006049 1.0e-14 85.1 60 75.0
ATR0751G077 Amborella trichopoda HOM05D005328 ORTHO05D006049 2.2e-14 84.0 109 53.2
Zm00001eb034090 Zea mays HOM05D005328 ORTHO05D006049 2.9e-14 83.6 143 42.0
QL05p065813 Quercus lobata HOM05D005328 ORTHO05D006049 5.0e-14 82.8 48 83.3
ATR0751G111 Amborella trichopoda HOM05D005328 ORTHO05D006049 8.5e-14 82.0 101 53.5
VMungo1383G0559 Vigna mungo HOM05D005328 ORTHO05D006049 8.5e-14 82.0 48 79.2
SMO246G0007 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 1.4e-11 74.7 48 72.9
Cre01.g021400 Chlamydomonas reinhardtii HOM05D005328 ORTHO05D006049 3.0e-11 73.6 160 31.2
Prupe.1G161500 Prunus persica HOM05D005328 ORTHO05D006049 7.4e-10 68.9 56 67.9
PRCOL_00001794 Prasinoderma coloniale HOM05D005328 ORTHO05D006049 1.8e-08 64.3 178 28.7
SMO117G0350 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 3.1e-08 63.5 119 40.3


User provided reference genes

Program Settings