Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c9_2790 Physcomitrium patens HOM05D006308 ORTHO05D007820 1.6e-138 496.1 251 100.0
Pp3c15_7010 Physcomitrium patens HOM05D006308 ORTHO05D007820 1.7e-68 263.5 231 63.6
Mapoly0031s0088 Marchantia polymorpha HOM05D006308 ORTHO05D007820 3.9e-57 225.7 156 67.3
Phvul.005G057100 Phaseolus vulgaris HOM05D006308 ORTHO05D007820 3.2e-51 206.1 186 53.8
SEGI_12516 Sequoiadendron giganteum HOM05D006308 ORTHO05D007820 3.2e-51 206.1 154 61.7
arahy.Tifrunner.gnm1.ann1.1EF43V Arachis hypogaea HOM05D006308 ORTHO05D007820 5.5e-51 205.3 163 58.3
Lalb_Chr20g0108751 Lupinus albus HOM05D006308 ORTHO05D007820 1.2e-50 204.1 172 54.7
GSVIVG01020411001 Vitis vinifera HOM05D006308 ORTHO05D007820 2.1e-50 203.4 142 64.1
AagrBONN_evm.TU.Sc2ySwM_228.3592 Anthoceros agrestis HOM05D006308 ORTHO05D007820 3.6e-50 202.6 162 59.9
CDE06G0902 Ceratophyllum demersum HOM05D006308 ORTHO05D007820 3.6e-50 202.6 170 55.3
Thecc.07G152500 Theobroma cacao HOM05D006308 ORTHO05D007820 4.7e-50 202.2 206 50.5
Atru.chr2.1759 Acer truncatum HOM05D006308 ORTHO05D007820 6.1e-50 201.8 163 56.4
Potri.011G142900 Populus trichocarpa HOM05D006308 ORTHO05D007820 6.1e-50 201.8 161 57.8
THA.LOC104822752 Tarenaya hassleriana HOM05D006308 ORTHO05D007820 6.1e-50 201.8 163 57.1
ATR0605G149 Amborella trichopoda HOM05D006308 ORTHO05D007820 7.9e-50 201.4 188 53.2
CDE08G1673 Ceratophyllum demersum HOM05D006308 ORTHO05D007820 7.9e-50 201.4 170 56.5
Ciclev10021874m.g Citrus clementina HOM05D006308 ORTHO05D007820 1.0e-49 201.1 163 55.8
Sed0010671 Sechium edule HOM05D006308 ORTHO05D007820 2.3e-49 199.9 161 59.6
SGA_v2.0_scaffold186G40217 Striga asiatica HOM05D006308 ORTHO05D007820 2.3e-49 199.9 154 59.7
Carub.0005s0924 Capsella rubella HOM05D006308 ORTHO05D007820 3.9e-49 199.1 174 54.6
CsaV3_4G007640 Cucumis sativus L. HOM05D006308 ORTHO05D007820 3.9e-49 199.1 161 57.1
FvH4_3g15760 Fragaria vesca HOM05D006308 ORTHO05D007820 3.9e-49 199.1 162 58.0
FAN11G0128 Fragaria x ananassa HOM05D006308 ORTHO05D007820 3.9e-49 199.1 162 58.0
FAN16G0301 Fragaria x ananassa HOM05D006308 ORTHO05D007820 3.9e-49 199.1 162 58.0
FAN21G3038 Fragaria x ananassa HOM05D006308 ORTHO05D007820 3.9e-49 199.1 162 58.0
Psat1g011160 Pisum sativum HOM05D006308 ORTHO05D007820 3.9e-49 199.1 171 55.0
CARHR087450 Cardamine hirsuta HOM05D006308 ORTHO05D007820 5.1e-49 198.7 174 54.6
Gohir.D05G331300 Gossypium hirsutum HOM05D006308 ORTHO05D007820 5.1e-49 198.7 163 55.8
Sabra16G0310800 Salix brachista HOM05D006308 ORTHO05D007820 5.1e-49 198.7 148 60.1
Potri.001G458600 Populus trichocarpa HOM05D006308 ORTHO05D007820 6.7e-49 198.4 158 57.6
AT3G12930 Arabidopsis thaliana HOM05D006308 ORTHO05D007820 8.8e-49 198.0 174 55.2
Ca_03675_v3 Cicer arietinum L. HOM05D006308 ORTHO05D007820 8.8e-49 198.0 163 55.2
Peaxi162Scf00452g00832 Petunia axillaris HOM05D006308 ORTHO05D007820 8.8e-49 198.0 157 56.7
MSTRG.7060 Avicennia marina HOM05D006308 ORTHO05D007820 1.1e-48 197.6 164 56.7
Gohir.A04G049000 Gossypium hirsutum HOM05D006308 ORTHO05D007820 1.1e-48 197.6 163 55.2
MD10G1202500 Malus domestica HOM05D006308 ORTHO05D007820 1.1e-48 197.6 181 53.0
ClCG07G010660 Citrullus lanatus HOM05D006308 ORTHO05D007820 1.5e-48 197.2 163 56.4
Glyma.08G172200 Glycine max HOM05D006308 ORTHO05D007820 1.5e-48 197.2 170 54.7
Gorai.009G355200 Gossypium raimondii HOM05D006308 ORTHO05D007820 1.5e-48 197.2 163 55.2
RcHm_v2.0_Chr5g0026561 Rosa chinensis HOM05D006308 ORTHO05D007820 1.5e-48 197.2 162 57.4
BolC1t05161H Brassica oleracea HOM05D006308 ORTHO05D007820 2.0e-48 196.8 213 48.4
Glyma.15G255800 Glycine max HOM05D006308 ORTHO05D007820 2.0e-48 196.8 168 55.4
AL3G24610 Arabidopsis lyrata HOM05D006308 ORTHO05D007820 2.6e-48 196.4 174 54.6
BcaC09g48280 Brassica carinata HOM05D006308 ORTHO05D007820 2.6e-48 196.4 213 48.4
CiPaw.12G004900 Carya illinoinensis HOM05D006308 ORTHO05D007820 2.6e-48 196.4 147 59.2
Migut.M01556 Erythranthe guttata HOM05D006308 ORTHO05D007820 2.6e-48 196.4 154 59.1
Eucgr.F01457 Eucalyptus grandis HOM05D006308 ORTHO05D007820 2.6e-48 196.4 172 55.2
FAN25G0513 Fragaria x ananassa HOM05D006308 ORTHO05D007820 2.6e-48 196.4 163 57.1
Nn6g31547 Nelumbo nucifera HOM05D006308 ORTHO05D007820 2.6e-48 196.4 151 58.3
MBI04_g08705_MAGBIO Magnolia biondii HOM05D006308 ORTHO05D007820 3.3e-48 196.1 156 56.4
Aa31LG8G150 Aethionema arabicum HOM05D006308 ORTHO05D007820 4.4e-48 195.7 152 58.6
Ah.16g106540 Amaranthus hybridus HOM05D006308 ORTHO05D007820 4.4e-48 195.7 172 54.1
CSS0031885 Camellia sinensis var. sinensis HOM05D006308 ORTHO05D007820 5.7e-48 195.3 230 47.0
CSS0041769 Camellia sinensis var. sinensis HOM05D006308 ORTHO05D007820 5.7e-48 195.3 230 47.0
Sed0016869 Sechium edule HOM05D006308 ORTHO05D007820 5.7e-48 195.3 160 57.5
Aqoxy5G00928 Aquilegia oxysepala HOM05D006308 ORTHO05D007820 7.4e-48 194.9 148 60.1
BraA05t22456Z Brassica rapa HOM05D006308 ORTHO05D007820 7.4e-48 194.9 231 45.9
MELO3C016177.2 Cucumis melo HOM05D006308 ORTHO05D007820 7.4e-48 194.9 174 52.9
Manes.14G016400 Manihot esculenta HOM05D006308 ORTHO05D007820 7.4e-48 194.9 161 54.0
QL08p064492 Quercus lobata HOM05D006308 ORTHO05D007820 7.4e-48 194.9 143 60.8
Sc06g0001530 Simmondsia chinensis HOM05D006308 ORTHO05D007820 7.4e-48 194.9 153 57.5
C01p52210 Brassica napus HOM05D006308 ORTHO05D007820 9.7e-48 194.5 213 47.9
CANSAT80G1356 Cannabis sativa HOM05D006308 ORTHO05D007820 9.7e-48 194.5 169 53.3
AUR62043126 Chenopodium quinoa HOM05D006308 ORTHO05D007820 9.7e-48 194.5 153 58.2
Thhalv10021431m.g Eutrema salsugineum HOM05D006308 ORTHO05D007820 9.7e-48 194.5 212 47.2
Nitab4.5_0001080g0030 Nicotiana tabacum HOM05D004008 ORTHO05D005383 9.7e-48 194.5 250 42.4
EL10Ac2g03321 Beta vulgaris HOM05D006308 ORTHO05D007820 1.3e-47 194.1 153 58.8
Medtr2g069470 Medicago truncatula HOM05D006308 ORTHO05D007820 1.3e-47 194.1 163 55.8
A05p36560 Brassica napus HOM05D006308 ORTHO05D007820 1.7e-47 193.7 231 45.9
CAN.G943.39 Capsicum annuum HOM05D006308 ORTHO05D007820 1.7e-47 193.7 153 56.9
Lj3g0010937 Lotus japonicus HOM05D006308 ORTHO05D007820 1.7e-47 193.7 186 51.1
SalBow8G4544 Salvia bowleyana HOM05D006308 ORTHO05D007820 2.2e-47 193.4 154 57.1
TPR.G9745 Trifolium pratense HOM05D006308 ORTHO05D007820 2.8e-47 193.0 162 56.2
A01p40570 Brassica napus HOM05D006308 ORTHO05D007820 3.7e-47 192.6 175 52.0
Duzib213G0994 Durio zibethinus HOM05D006308 ORTHO05D007820 3.7e-47 192.6 194 49.0
Sp3g11070 Schrenkiella parvula HOM05D006308 ORTHO05D007820 3.7e-47 192.6 163 54.6
Solyc07g066460.3 Solanum lycopersicum HOM05D006308 ORTHO05D007820 4.8e-47 192.2 154 56.5
Sopen07g034640 Solanum pennellii HOM05D006308 ORTHO05D007820 4.8e-47 192.2 154 56.5
PGSC0003DMG400022127 Solanum tuberosum HOM05D006308 ORTHO05D007820 4.8e-47 192.2 154 56.5
BolC5t34167H Brassica oleracea HOM05D006308 ORTHO05D007820 6.3e-47 191.8 230 45.2
COL.COLO4_07328 Corchorus olitorius HOM05D006308 ORTHO05D007820 6.3e-47 191.8 237 45.6
TWI39G0290 Tripterygium wilfordii HOM05D006308 ORTHO05D007820 6.3e-47 191.8 166 54.8
unitig_46.g18521 Utricularia gibba HOM05D006308 ORTHO05D007820 6.3e-47 191.8 151 58.9
HPP92_015477 Vanilla planifolia HOM05D006308 ORTHO05D007820 1.4e-46 190.7 187 53.5
Prupe.4G139700 Prunus persica HOM05D006308 ORTHO05D007820 2.4e-46 189.9 170 54.1
Lsat_1_v5_gn_5_125241 Lactuca sativa HOM05D006308 ORTHO05D007820 3.1e-46 189.5 144 58.3
Rhsim06G0239000 Rhododendron simsii HOM05D006308 ORTHO05D007820 3.1e-46 189.5 200 50.0
BcaC05g29223 Brassica carinata HOM05D006308 ORTHO05D007820 4.1e-46 189.1 142 59.9
PGR083G0385 Punica granatum HOM05D006308 ORTHO05D007820 4.1e-46 189.1 176 52.8
BraA01t04092Z Brassica rapa HOM05D006308 ORTHO05D007820 5.3e-46 188.7 175 51.4
Nitab4.5_0001749g0010 Nicotiana tabacum HOM05D004008 ORTHO05D005383 5.3e-46 188.7 218 46.3
HanXRQChr10g0305791 Helianthus annuus HOM05D006308 ORTHO05D007820 7.0e-46 188.3 142 59.9
PSO017G0504 Papaver somniferum HOM05D006308 ORTHO05D007820 7.0e-46 188.3 156 53.2
PSO170G1595 Papaver somniferum HOM05D006308 ORTHO05D007820 7.0e-46 188.3 156 53.2
ECA234G3728 Erigeron canadensis HOM05D006308 ORTHO05D007820 1.2e-45 187.6 143 59.4
vmacro11665 Vaccinium macrocarpon HOM05D006308 ORTHO05D007820 1.2e-45 187.6 143 59.4
arahy.Tifrunner.gnm1.ann1.HXV25C Arachis hypogaea HOM05D006308 ORTHO05D007820 1.6e-45 187.2 196 48.0
Cc05_g16080 Coffea canephora HOM05D006308 ORTHO05D007820 2.0e-45 186.8 166 53.6
Lj1A905G40 Lonicera japonica HOM05D006308 ORTHO05D007820 4.5e-45 185.7 143 58.7
DCAR_016822 Daucus carota HOM05D006308 ORTHO05D007820 5.9e-45 185.3 143 59.4
Hund12461 Selenicereus undatus HOM05D006308 ORTHO05D007820 2.9e-44 183.0 159 53.5
Sabra11G0127800 Salix brachista HOM05D006308 ORTHO05D007820 5.0e-44 182.2 186 48.9
Hma1.2p1_0334F.1_g128750 Hydrangea macrophylla HOM05D006308 ORTHO05D007820 8.5e-44 181.4 213 46.0
C05p54980 Brassica napus HOM05D006308 ORTHO05D007820 9.4e-43 177.9 255 40.8
Os09g0493600 Oryza sativa ssp. japonica HOM05D006308 ORTHO05D007820 2.1e-42 176.8 174 51.1
Oeu051665.1 Olea europaea HOM05D006308 ORTHO05D007820 4.0e-41 172.6 190 47.4
SMO367G0472 Selaginella moellendorffii HOM05D006308 ORTHO05D007820 2.2e-39 166.8 163 49.7
BcaB06g25499 Brassica carinata HOM05D006308 ORTHO05D007820 4.8e-39 165.6 262 37.4
Haze_08539 Corylus avellana HOM05D006308 ORTHO05D007820 1.4e-38 164.1 186 44.1
VMungo1080G0665 Vigna mungo HOM05D006308 ORTHO05D007820 1.5e-32 144.1 152 47.4
TAR381G0490 Trochodendron aralioides HOM05D006308 ORTHO05D007820 1.4e-30 137.5 139 48.2
Actinidia07352 Actinidia chinensis HOM05D006308 ORTHO05D007820 7.0e-30 135.2 81 67.9
Dinv42509 Davidia involucrata HOM05D006308 ORTHO05D007820 3.5e-29 132.9 193 40.9
Actinidia12793 Actinidia chinensis HOM05D006308 ORTHO05D007820 1.0e-28 131.3 212 39.2
Manes.06G172000 Manihot esculenta HOM05D006308 ORTHO05D007820 5.0e-28 129.0 127 48.0
Nn3g19990 Nelumbo nucifera HOM05D006308 ORTHO05D007820 5.5e-27 125.6 137 48.2
Nn3g19991 Nelumbo nucifera HOM05D006308 ORTHO05D007820 5.5e-27 125.6 137 48.2
PRCOL_00002538 Prasinoderma coloniale HOM05D006308 ORTHO05D007820 6.6e-20 102.1 134 41.8
Cre03.g205600 Chlamydomonas reinhardtii HOM05D006308 ORTHO05D007820 2.5e-19 100.1 114 43.9
CAN.G337.145 Capsicum annuum HOM05D006308 ORTHO05D007820 1.0e-17 94.7 62 62.9
MCO04G467 Micromonas commoda HOM05D006308 ORTHO05D007820 1.0e-17 94.7 112 38.4
Nn3g18400 Nelumbo nucifera HOM05D006308 ORTHO05D007820 8.3e-15 85.1 87 48.3
CBR_g48397 Chara braunii HOM05D006308 ORTHO05D007820 3.9e-12 76.3 94 42.6
A01p40580 Brassica napus HOM05D006308 ORTHO05D007820 3.6e-10 69.7 94 41.5
AUR62039167 Chenopodium quinoa HOM05D007854 ORTHO05D138328 2.6e-08 63.5 34 76.5


User provided reference genes

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