Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_9010 Physcomitrium patens HOM05D053621 ORTHO05D050341 8.4e-143 510.4 263 100.0
Pp3c7_9011 Physcomitrium patens HOM05D053621 ORTHO05D050341 8.4e-143 510.4 263 100.0
Pp3c11_16970 Physcomitrium patens HOM05D003157 ORTHO05D004447 2.9e-10 70.1 85 43.5
MSTRG.9691 Avicennia marina HOM05D003157 ORTHO05D004447 4.9e-10 69.3 170 34.1
Pp3c7_8990 Physcomitrium patens HOM05D003157 ORTHO05D004447 4.9e-10 69.3 86 47.7
Cc04_g11550 Coffea canephora HOM05D003157 ORTHO05D004447 6.4e-10 68.9 146 37.0
PGSC0003DMG400027073 Solanum tuberosum HOM05D003157 ORTHO05D004447 6.4e-10 68.9 107 39.3
Oeu040857.2 Olea europaea HOM05D003157 ORTHO05D004447 5.5e-09 65.9 242 30.6
Zm00001eb245950 Zea mays HOM05D003157 ORTHO05D004447 9.3e-09 65.1 228 27.2
HanXRQChr10g0296081 Helianthus annuus HOM05D003157 ORTHO05D004447 1.2e-08 64.7 101 42.6
SGA_v2.0_scaffold114G31812 Striga asiatica HOM05D003157 ORTHO05D004447 2.1e-08 63.9 145 33.1
Solyc06g071770.4 Solanum lycopersicum HOM05D003157 ORTHO05D004447 2.7e-08 63.5 109 38.5
Sopen06g028060 Solanum pennellii HOM05D003157 ORTHO05D004447 2.7e-08 63.5 111 37.8
THA.LOC104809775 Tarenaya hassleriana HOM05D003157 ORTHO05D004447 4.6e-08 62.8 109 36.7
MSTRG.11494 Avicennia marina HOM05D003157 ORTHO05D004447 1.0e-07 61.6 145 33.8
ECA232G3241 Erigeron canadensis HOM05D003157 ORTHO05D004447 1.0e-07 61.6 109 38.5
Migut.O00157 Erythranthe guttata HOM05D003157 ORTHO05D004447 1.3e-07 61.2 85 42.4
Actinidia08960 Actinidia chinensis HOM05D003157 ORTHO05D004447 1.8e-07 60.8 102 34.3
CSS0041144 Camellia sinensis var. sinensis HOM05D003157 ORTHO05D004447 1.8e-07 60.8 113 33.6
Solyc03g112230.4 Solanum lycopersicum HOM05D003157 ORTHO05D004447 1.8e-07 60.8 100 38.0
Sopen03g031330 Solanum pennellii HOM05D003157 ORTHO05D004447 1.8e-07 60.8 100 38.0
Migut.O00156 Erythranthe guttata HOM05D003157 ORTHO05D004447 2.3e-07 60.5 84 44.0
Nitab4.5_0000003g0820 Nicotiana tabacum HOM05D003157 ORTHO05D004447 2.3e-07 60.5 266 26.3
Atru.chr9.2574 Acer truncatum HOM05D003157 ORTHO05D004447 3.0e-07 60.1 108 37.0
DCAR_016024 Daucus carota HOM05D003157 ORTHO05D004447 3.0e-07 60.1 116 33.6
DCAR_026172 Daucus carota HOM05D003157 ORTHO05D004447 3.0e-07 60.1 110 35.5
AUR62008147 Chenopodium quinoa HOM05D003157 ORTHO05D004447 3.9e-07 59.7 109 38.5
SalBow6G1229 Salvia bowleyana HOM05D003157 ORTHO05D004447 3.9e-07 59.7 107 36.4
AUR62028729 Chenopodium quinoa HOM05D003157 ORTHO05D004447 5.1e-07 59.3 109 37.6
A03p55470 Brassica napus HOM05D003157 ORTHO05D004447 6.7e-07 58.9 110 38.2
BraA03t14620Z Brassica rapa HOM05D003157 ORTHO05D004447 6.7e-07 58.9 110 38.2
CAN.G993.20 Capsicum annuum HOM05D003157 ORTHO05D004447 6.7e-07 58.9 101 39.6
Thhalv10024557m.g Eutrema salsugineum HOM05D003157 ORTHO05D004447 6.7e-07 58.9 132 33.3
TWI23G0818 Tripterygium wilfordii HOM05D003157 ORTHO05D004447 6.7e-07 58.9 107 38.3
Gohir.A11G040300 Gossypium hirsutum HOM05D003157 ORTHO05D004447 8.7e-07 58.5 111 38.7
Gohir.D11G043500 Gossypium hirsutum HOM05D003157 ORTHO05D004447 8.7e-07 58.5 113 36.3
Lsat_1_v5_gn_4_77240 Lactuca sativa HOM05D003157 ORTHO05D004447 8.7e-07 58.5 98 37.8
PSO111G0086 Papaver somniferum HOM05D003157 ORTHO05D004447 8.7e-07 58.5 197 28.9
PGSC0003DMG400018122 Solanum tuberosum HOM05D003157 ORTHO05D004447 8.7e-07 58.5 100 37.0
Manes.14G060700 Manihot esculenta HOM05D003157 ORTHO05D004447 1.1e-06 58.2 106 38.7
GSVIVG01007647001 Vitis vinifera HOM05D003157 ORTHO05D004447 1.1e-06 58.2 100 35.0
Manes.06G110100 Manihot esculenta HOM05D003157 ORTHO05D004447 1.5e-06 57.8 106 37.7
Rhsim08G0177500 Rhododendron simsii HOM05D003157 ORTHO05D004447 1.5e-06 57.8 108 35.2
PSO754G0123 Papaver somniferum HOM05D003157 ORTHO05D004447 1.9e-06 57.4 90 37.8
AT4G24690 Arabidopsis thaliana HOM05D003157 ORTHO05D004447 2.5e-06 57.0 107 35.5
HanXRQChr16g0504701 Helianthus annuus HOM05D003157 ORTHO05D004447 2.5e-06 57.0 96 38.5
Hund02785 Selenicereus undatus HOM05D003157 ORTHO05D004447 2.5e-06 57.0 102 36.3
unitig_37.g12746 Utricularia gibba HOM05D003157 ORTHO05D004447 2.5e-06 57.0 88 38.6
A01p16030 Brassica napus HOM05D003157 ORTHO05D004447 3.3e-06 56.6 130 31.5
Carub.0007s1637 Capsella rubella HOM05D003157 ORTHO05D004447 3.3e-06 56.6 132 34.1
Ciclev10024152m.g Citrus clementina HOM05D003157 ORTHO05D004447 3.3e-06 56.6 75 42.7
Gorai.007G046900 Gossypium raimondii HOM05D003157 ORTHO05D004447 3.3e-06 56.6 113 36.3
QL10p006899 Quercus lobata HOM05D003157 ORTHO05D004447 3.3e-06 56.6 106 37.7
AL7G28510 Arabidopsis lyrata HOM05D003157 ORTHO05D004447 4.3e-06 56.2 218 27.1
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 4.3e-06 56.2 97 38.1
C07p53750 Brassica napus HOM05D003157 ORTHO05D004447 4.3e-06 56.2 110 35.5
Os02g0593700 Oryza sativa ssp. japonica HOM05D003157 ORTHO05D004447 4.3e-06 56.2 98 34.7
A08p21390 Brassica napus HOM05D003157 ORTHO05D004447 5.6e-06 55.8 109 36.7
CiPaw.11G019800 Carya illinoinensis HOM05D003157 ORTHO05D004447 5.6e-06 55.8 103 36.9
Lj5A130T68 Lonicera japonica HOM05D003157 ORTHO05D004447 5.6e-06 55.8 110 34.5
Nitab4.5_0008713g0020 Nicotiana tabacum HOM05D003157 ORTHO05D004447 5.6e-06 55.8 266 25.2
CAN.G338.32 Capsicum annuum HOM05D003157 ORTHO05D004447 7.4e-06 55.5 224 24.1
FAN13G0746 Fragaria x ananassa HOM05D003157 ORTHO05D004447 7.4e-06 55.5 106 37.7
Lsat_1_v5_gn_1_27780 Lactuca sativa HOM05D003157 ORTHO05D004447 7.4e-06 55.5 94 37.2
Thecc.03G025700 Theobroma cacao HOM05D003157 ORTHO05D004447 7.4e-06 55.5 75 42.7
HPP92_024706 Vanilla planifolia HOM05D003157 ORTHO05D004447 7.4e-06 55.5 98 35.7
Zm00001eb079700 Zea mays HOM05D003157 ORTHO05D004447 7.4e-06 55.5 114 31.6
DCAR_021588 Daucus carota HOM05D003157 ORTHO05D004447 9.6e-06 55.1 79 40.5
Lalb_Chr07g0182971 Lupinus albus HOM05D003157 ORTHO05D004447 9.6e-06 55.1 105 34.3
Potri.012G085700 Populus trichocarpa HOM05D003157 ORTHO05D004447 9.6e-06 55.1 72 44.4
Potri.015G084000 Populus trichocarpa HOM05D003157 ORTHO05D004447 9.6e-06 55.1 106 35.8
PGR044G1972 Punica granatum HOM05D003157 ORTHO05D004447 9.6e-06 55.1 106 34.9
SEGI_31497 Sequoiadendron giganteum HOM05D003157 ORTHO05D012168 9.6e-06 55.1 93 44.1
TWI14G1342 Tripterygium wilfordii HOM05D003157 ORTHO05D004447 9.6e-06 55.1 75 44.0


User provided reference genes

Program Settings