Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_2870 Physcomitrium patens HOM05D005962 ORTHO05D007325 2.3e-154 548.9 279 100.0
Pp3c11_22580 Physcomitrium patens HOM05D005962 ORTHO05D007325 2.0e-46 190.3 242 49.6
CAN.G1143.30 Capsicum annuum HOM05D005962 ORTHO05D007325 3.4e-17 93.2 220 35.0
Mapoly0012s0176 Marchantia polymorpha HOM05D005962 ORTHO05D007325 3.4e-17 93.2 181 35.9
unitig_32.g10986 Utricularia gibba HOM05D005962 ORTHO05D007325 9.9e-17 91.7 230 34.8
Nitab4.5_0001172g0180 Nicotiana tabacum HOM05D005962 ORTHO05D007325 4.9e-16 89.4 201 34.8
Sopen03g040020 Solanum pennellii HOM05D005962 ORTHO05D007325 8.3e-16 88.6 218 35.3
PGSC0003DMG401002516 Solanum tuberosum HOM05D005962 ORTHO05D007325 8.3e-16 88.6 220 34.5
GSVIVG01016927001 Vitis vinifera HOM05D005962 ORTHO05D007325 8.3e-16 88.6 229 35.8
Solyc03g121210.4 Solanum lycopersicum HOM05D005962 ORTHO05D007325 1.1e-15 88.2 202 35.6
Nitab4.5_0002423g0030 Nicotiana tabacum HOM05D005962 ORTHO05D007325 1.4e-15 87.8 201 35.8
AUR62018448 Chenopodium quinoa HOM05D005962 ORTHO05D007325 1.9e-15 87.4 208 34.6
Sc19g0007830 Simmondsia chinensis HOM05D005962 ORTHO05D007325 1.9e-15 87.4 232 34.5
Eucgr.J02602 Eucalyptus grandis HOM05D005962 ORTHO05D007325 2.4e-15 87.0 203 35.0
DCAR_007600 Daucus carota HOM05D005962 ORTHO05D007325 3.2e-15 86.7 230 34.8
QL08p056642 Quercus lobata HOM05D005962 ORTHO05D007325 4.1e-15 86.3 219 35.2
AUR62020986 Chenopodium quinoa HOM05D005962 ORTHO05D007325 5.4e-15 85.9 208 34.1
Oeu024256.1 Olea europaea HOM05D005962 ORTHO05D007325 7.1e-15 85.5 257 33.1
ECA248G1573 Erigeron canadensis HOM05D005962 ORTHO05D007325 9.2e-15 85.1 230 34.8
HPP92_007682 Vanilla planifolia HOM05D005962 ORTHO05D007325 9.2e-15 85.1 224 32.1
PGR102G2175 Punica granatum HOM05D005962 ORTHO05D007325 1.2e-14 84.7 221 32.6
HanXRQChr15g0489361 Helianthus annuus HOM05D005962 ORTHO05D007325 1.6e-14 84.3 222 33.8
Lsat_1_v5_gn_5_181040 Lactuca sativa HOM05D005962 ORTHO05D007325 1.6e-14 84.3 208 33.2
TAR623G1297 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.6e-14 84.3 233 34.3
AagrBONN_evm.TU.Sc2ySwM_362.1658 Anthoceros agrestis HOM05D005962 ORTHO05D007325 2.1e-14 84.0 203 34.5
VMungo0331G0822 Vigna mungo HOM05D005962 ORTHO05D007325 2.1e-14 84.0 258 31.8
Hma1.2p1_0764F.1_g214960 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 2.7e-14 83.6 181 35.4
Hma1.2p1_2308F.1_g319480 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 2.7e-14 83.6 181 35.4
Prupe.3G054900 Prunus persica HOM05D005962 ORTHO05D007325 2.7e-14 83.6 204 34.8
Aqoxy2G04031 Aquilegia oxysepala HOM05D005962 ORTHO05D007325 3.5e-14 83.2 234 34.2
EL10Ac3g07358 Beta vulgaris HOM05D005962 ORTHO05D007325 3.5e-14 83.2 230 33.9
Phvul.010G143300 Phaseolus vulgaris HOM05D005962 ORTHO05D007325 3.5e-14 83.2 258 32.2
Sabra17G0126400 Salix brachista HOM05D005962 ORTHO05D007325 3.5e-14 83.2 229 32.8
Sed0025844 Sechium edule HOM05D005962 ORTHO05D007325 3.5e-14 83.2 233 34.8
THA.LOC104805924 Tarenaya hassleriana HOM05D005962 ORTHO05D007325 3.5e-14 83.2 204 33.8
Manes.04G136400 Manihot esculenta HOM05D005962 ORTHO05D007325 4.6e-14 82.8 227 33.0
CiPaw.02G144100 Carya illinoinensis HOM05D005962 ORTHO05D007325 6.0e-14 82.4 229 34.5
Dinv37956 Davidia involucrata HOM05D005962 ORTHO05D007325 6.0e-14 82.4 232 34.1
Gorai.011G069400 Gossypium raimondii HOM05D005962 ORTHO05D007325 6.0e-14 82.4 203 34.0
SGA_v2.0_scaffold45G16998 Striga asiatica HOM05D005962 ORTHO05D007325 6.0e-14 82.4 181 35.4
Glyma.08G199200 Glycine max HOM05D005962 ORTHO05D007325 7.8e-14 82.0 261 31.8
Peaxi162Scf00038g01151 Petunia axillaris HOM05D005962 ORTHO05D007325 7.8e-14 82.0 236 33.1
Solyc12g044640.2 Solanum lycopersicum HOM05D005962 ORTHO05D007325 1.0e-13 81.6 208 34.6
PGSC0003DMG400026839 Solanum tuberosum HOM05D005962 ORTHO05D007325 1.0e-13 81.6 229 32.8
Atru.chr12.732 Acer truncatum HOM05D005962 ORTHO05D007325 1.3e-13 81.3 229 34.1
BraA05t21615Z Brassica rapa HOM05D005962 ORTHO05D007325 1.3e-13 81.3 177 36.7
Ca_23283_v3 Cicer arietinum L. HOM05D005962 ORTHO05D007325 1.3e-13 81.3 226 33.2
BcaB06g26231 Brassica carinata HOM05D005962 ORTHO05D007325 1.7e-13 80.9 176 35.2
CSS0027495 Camellia sinensis var. sinensis HOM05D005962 ORTHO05D007325 1.7e-13 80.9 229 33.2
Gohir.D01G215700 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.7e-13 80.9 232 32.8
Gorai.002G261900 Gossypium raimondii HOM05D005962 ORTHO05D007325 1.7e-13 80.9 232 32.8
RcHm_v2.0_Chr2g0141751 Rosa chinensis HOM05D005962 ORTHO05D007325 1.7e-13 80.9 173 37.0
SalBow6G5073 Salvia bowleyana HOM05D005962 ORTHO05D007325 1.7e-13 80.9 233 32.6
Ciclev10026335m.g Citrus clementina HOM05D005962 ORTHO05D007325 2.3e-13 80.5 220 32.7
Cc00_g23930 Coffea canephora HOM05D005962 ORTHO05D007325 2.3e-13 80.5 233 32.2
SMO143G0120 Selaginella moellendorffii HOM05D005962 ORTHO05D007325 2.3e-13 80.5 204 31.9
Actinidia32123 Actinidia chinensis HOM05D005962 ORTHO05D007325 3.0e-13 80.1 232 31.0
arahy.Tifrunner.gnm1.ann1.FEFU12 Arachis hypogaea HOM05D005962 ORTHO05D007325 3.0e-13 80.1 205 33.7
Carub.0003s2138 Capsella rubella HOM05D005962 ORTHO05D007325 3.0e-13 80.1 200 33.5
COL.COLO4_30547 Corchorus olitorius HOM05D005962 ORTHO05D007325 3.0e-13 80.1 204 33.3
Haze_15888 Corylus avellana HOM05D005962 ORTHO05D007325 3.0e-13 80.1 229 32.3
FvH4_6g32730 Fragaria vesca HOM05D005962 ORTHO05D007325 3.0e-13 80.1 181 35.4
FAN02G1749 Fragaria x ananassa HOM05D005962 ORTHO05D007325 3.0e-13 80.1 182 34.1
FAN05G1114 Fragaria x ananassa HOM05D005962 ORTHO05D007325 3.0e-13 80.1 181 35.4
Lj3g0005277 Lotus japonicus HOM05D005962 ORTHO05D007325 3.0e-13 80.1 236 33.5
Rhsim08G0229500 Rhododendron simsii HOM05D005962 ORTHO05D007325 3.0e-13 80.1 229 33.2
Sopen12g023060 Solanum pennellii HOM05D005962 ORTHO05D007325 3.0e-13 80.1 182 35.7
ClCG07G013490 Citrullus lanatus HOM05D005962 ORTHO05D007325 3.9e-13 79.7 229 32.8
Duzib192G0276 Durio zibethinus HOM05D005962 ORTHO05D007325 3.9e-13 79.7 184 34.8
PSO210G0258 Papaver somniferum HOM05D005962 ORTHO05D007325 3.9e-13 79.7 230 31.7
CANSAT21G1984 Cannabis sativa HOM05D005962 ORTHO05D007325 5.1e-13 79.3 223 32.7
Migut.I00971 Erythranthe guttata HOM05D005962 ORTHO05D007325 5.1e-13 79.3 231 32.9
vmacro18833 Vaccinium macrocarpon HOM05D005962 ORTHO05D007325 5.1e-13 79.3 206 34.0
AT3G21350 Arabidopsis thaliana HOM05D005962 ORTHO05D007325 6.6e-13 79.0 181 34.3
CsaV3_3G023410 Cucumis sativus L. HOM05D005962 ORTHO05D007325 6.6e-13 79.0 229 32.8
PSO210G7608 Papaver somniferum HOM05D005962 ORTHO05D007325 6.6e-13 79.0 224 32.6
Psat4g195960 Pisum sativum HOM05D005962 ORTHO05D007325 6.6e-13 79.0 258 31.0
A05p27250 Brassica napus HOM05D005962 ORTHO05D007325 8.6e-13 78.6 176 35.8
Lalb_Chr01g0013231 Lupinus albus HOM05D005962 ORTHO05D007325 8.6e-13 78.6 261 29.5
MBI01_g35895_MAGBIO Magnolia biondii HOM05D005962 ORTHO05D007325 8.6e-13 78.6 261 33.0
Thecc.06G103400 Theobroma cacao HOM05D005962 ORTHO05D007325 8.6e-13 78.6 232 32.3
Gohir.A01G226000 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.1e-12 78.2 184 34.8
Gohir.A10G063800 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.1e-12 78.2 231 32.0
Gohir.D10G065400 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.1e-12 78.2 203 32.5
Zm00001eb372970 Zea mays HOM05D005962 ORTHO05D007325 1.9e-12 77.4 181 34.3
CBR_g22489 Chara braunii HOM05D005962 ORTHO05D007325 2.5e-12 77.0 225 30.2
Nn4g25123 Nelumbo nucifera HOM05D005962 ORTHO05D007325 2.5e-12 77.0 231 31.6
FAN09G1055 Fragaria x ananassa HOM05D005962 ORTHO05D007325 3.3e-12 76.6 175 35.4
Rhsim08G0229700 Rhododendron simsii HOM05D005962 ORTHO05D007325 3.3e-12 76.6 242 31.0
Aa31LG8G8050 Aethionema arabicum HOM05D005962 ORTHO05D007325 4.3e-12 76.3 200 32.5
TWI12G1051 Tripterygium wilfordii HOM05D005962 ORTHO05D007325 4.3e-12 76.3 259 31.3
C05p42110 Brassica napus HOM05D005962 ORTHO05D007325 5.6e-12 75.9 176 34.7
Cpa.g.sc131.1 Carica papaya HOM05D005962 ORTHO05D007325 5.6e-12 75.9 137 37.2
Sp3g19410 Schrenkiella parvula HOM05D005962 ORTHO05D007325 5.6e-12 75.9 258 28.7
AL3G35400 Arabidopsis lyrata HOM05D005962 ORTHO05D007325 7.3e-12 75.5 260 28.8
Ah.04g150140 Amaranthus hybridus HOM05D005962 ORTHO05D007325 9.5e-12 75.1 160 36.2
Manes.11G030300 Manihot esculenta HOM05D005962 ORTHO05D007325 9.5e-12 75.1 260 28.8
MELO3C013015.2 Cucumis melo HOM05D005962 ORTHO05D007325 1.2e-11 74.7 258 31.0
Os06g0217500 Oryza sativa ssp. japonica HOM05D005962 ORTHO05D007325 1.2e-11 74.7 232 31.0
Migut.O00801 Erythranthe guttata HOM05D005962 ORTHO05D007325 1.6e-11 74.3 137 38.7
arahy.Tifrunner.gnm1.ann1.M52QXX Arachis hypogaea HOM05D005962 ORTHO05D007325 2.1e-11 73.9 286 29.4
MSTRG.11013 Avicennia marina HOM05D005962 ORTHO05D007325 2.1e-11 73.9 231 31.6
Medtr8g015230 Medicago truncatula HOM05D005962 ORTHO05D007325 2.1e-11 73.9 232 32.8
Thhalv10021373m.g Eutrema salsugineum HOM05D005962 ORTHO05D007325 2.8e-11 73.6 230 30.0
Migut.I00969 Erythranthe guttata HOM05D005962 ORTHO05D007325 3.6e-11 73.2 135 38.5
SHI11207 Sapria himalayana HOM05D005962 ORTHO05D007325 3.6e-11 73.2 207 33.3
BcaC05g28175 Brassica carinata HOM05D005962 ORTHO05D007325 4.7e-11 72.8 258 29.1
ATR0705G221 Amborella trichopoda HOM05D005962 ORTHO05D007325 8.1e-11 72.0 141 36.2
CARHR097270 Cardamine hirsuta HOM05D005962 ORTHO05D007325 1.4e-10 71.2 257 28.4
BolC5t32941H Brassica oleracea HOM05D005962 ORTHO05D007325 5.2e-10 69.3 137 36.5
Cfa019374 Carpinus fangiana HOM05D005962 ORTHO05D007325 2.0e-09 67.4 39 74.4
Lj5C50T14 Lonicera japonica HOM05D005962 ORTHO05D007325 4.4e-09 66.2 39 71.8
Dinv30416 Davidia involucrata HOM05D005962 ORTHO05D007325 1.4e-07 61.2 39 66.7
Lsat_1_v5_gn_2_99820 Lactuca sativa HOM05D005962 ORTHO05D007325 1.4e-07 61.2 39 66.7


User provided reference genes

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