Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_26620 Physcomitrium patens HOM05D006564 ORTHO05D007772 2.7e-288 994.6 486 100.0
AagrBONN_evm.TU.Sc2ySwM_362.2494 Anthoceros agrestis HOM05D006564 ORTHO05D007772 1.4e-37 161.8 444 26.4
Mapoly0088s0064 Marchantia polymorpha HOM05D006564 ORTHO05D007772 2.4e-26 124.4 383 27.7
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 2.2e-24 117.9 476 23.3
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 4.2e-23 113.6 485 23.5
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 2.0e-20 104.8 472 22.5
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 5.7e-20 103.2 450 23.3
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 3.7e-19 100.5 477 22.6
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 6.3e-19 99.8 403 23.8
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 1.1e-18 99.0 463 22.9
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 1.8e-18 98.2 478 21.5
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 1.8e-18 98.2 456 22.1
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 3.1e-18 97.4 477 21.6
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 2.6e-17 94.4 447 23.9
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 4.5e-17 93.6 482 22.0
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 5.9e-17 93.2 495 22.8
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 7.7e-17 92.8 476 22.9
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 1.3e-16 92.0 452 20.1
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 1.7e-16 91.7 429 22.1
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 2.2e-16 91.3 481 21.8
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 3.8e-16 90.5 447 22.1
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 6.5e-16 89.7 480 23.1
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 1.5e-15 88.6 485 22.5
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 3.2e-15 87.4 443 22.6
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 4.2e-15 87.0 473 22.0
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 4.2e-15 87.0 474 21.3
Lsat_1_v5_gn_4_5380 Lactuca sativa HOM05D006564 ORTHO05D007772 1.2e-14 85.5 254 28.0
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 2.1e-14 84.7 477 22.6
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 1.0e-13 82.4 477 22.4
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 1.4e-13 82.0 447 20.8
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 1.4e-13 82.0 447 20.8
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 1.4e-13 82.0 484 20.7
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 1.8e-13 81.6 448 22.1
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 2.3e-13 81.3 481 21.6
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 1.2e-12 79.0 467 21.2
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 1.2e-12 79.0 448 22.1
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 2.6e-12 77.8 478 20.3
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 3.3e-12 77.4 475 20.8
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 4.4e-12 77.0 484 21.9
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 4.4e-12 77.0 236 26.3
ATR1091G047 Amborella trichopoda HOM05D006564 ORTHO05D007772 9.7e-12 75.9 158 27.8
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 9.7e-12 75.9 446 21.5
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 9.7e-12 75.9 448 20.3
Manes.13G029100 Manihot esculenta HOM05D006564 ORTHO05D007772 1.3e-11 75.5 206 28.2
Hund06003 Selenicereus undatus HOM05D006564 ORTHO05D007772 1.7e-11 75.1 211 25.6
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 1.1e-10 72.4 448 20.3
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 1.8e-10 71.6 488 20.5
Zm00001eb227420 Zea mays HOM05D006564 ORTHO05D007772 2.4e-10 71.2 244 26.6
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 4.1e-10 70.5 447 19.7
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 7.0e-10 69.7 482 20.1
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 7.0e-10 69.7 213 23.9
Ca_03150_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 9.1e-10 69.3 165 28.5
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 9.1e-10 69.3 400 19.8
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 1.6e-09 68.6 455 20.2
CBR_g8804 Chara braunii HOM05D006564 ORTHO05D007772 4.5e-09 67.0 190 25.8
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 4.5e-09 67.0 218 23.9
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 1.7e-08 65.1 486 20.8
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 2.9e-08 64.3 367 19.9
Sabra10G0025500 Salix brachista HOM05D006564 ORTHO05D007772 1.5e-07 62.0 237 24.5
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 3.2e-07 60.8 212 23.1
Cfa009164 Carpinus fangiana HOM05D006564 ORTHO05D007772 4.2e-07 60.5 214 22.4
unitig_744.g23977 Utricularia gibba HOM05D006564 ORTHO05D007772 9.4e-07 59.3 176 27.8
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 1.2e-06 58.9 477 19.3
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 8.0e-06 56.2 484 19.8


User provided reference genes

Program Settings