Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_25960 Physcomitrium patens HOM05D006964 ORTHO05D008861 1.8e-107 392.5 189 100.0
Pp3c23_21270 Physcomitrium patens HOM05D006964 ORTHO05D008861 5.8e-45 184.9 103 85.4
Pp3c24_11680 Physcomitrium patens HOM05D006964 ORTHO05D008861 3.3e-32 142.5 97 73.2
CiPaw.05G264600 Carya illinoinensis HOM05D006964 ORTHO05D008861 8.7e-25 117.9 109 58.7
MBI18_g18636_MAGBIO Magnolia biondii HOM05D006964 ORTHO05D008861 8.7e-25 117.9 103 60.2
SEGI_30607 Sequoiadendron giganteum HOM05D006964 ORTHO05D008861 8.7e-25 117.9 102 61.8
Nitab4.5_0002450g0010 Nicotiana tabacum HOM05D006964 ORTHO05D008861 1.9e-24 116.7 105 57.1
Mapoly0100s0005 Marchantia polymorpha HOM05D006964 ORTHO05D008861 7.4e-24 114.8 102 59.8
Sc07g0001890 Simmondsia chinensis HOM05D006964 ORTHO05D008861 1.3e-23 114.0 101 59.4
arahy.Tifrunner.gnm1.ann1.3RSR9Y Arachis hypogaea HOM05D006964 ORTHO05D008861 1.6e-23 113.6 111 55.0
Nn7g38387 Nelumbo nucifera HOM05D006964 ORTHO05D008861 1.6e-23 113.6 103 57.3
PGSC0003DMG400014180 Solanum tuberosum HOM05D006964 ORTHO05D008861 1.6e-23 113.6 101 59.4
Sopen03g037220 Solanum pennellii HOM05D006964 ORTHO05D008861 2.1e-23 113.2 101 58.4
CDE02G0076 Ceratophyllum demersum HOM05D006964 ORTHO05D008861 2.8e-23 112.8 104 58.7
QL04p064712 Quercus lobata HOM05D006964 ORTHO05D008861 4.8e-23 112.1 101 58.4
Lj1C622G7 Lonicera japonica HOM05D006964 ORTHO05D008861 6.2e-23 111.7 102 56.9
QL04p064780 Quercus lobata HOM05D006964 ORTHO05D008861 6.2e-23 111.7 101 57.4
TAR464G0001 Trochodendron aralioides HOM05D006964 ORTHO05D008861 6.2e-23 111.7 103 57.3
CAN.G843.21 Capsicum annuum HOM05D006964 ORTHO05D008861 8.1e-23 111.3 101 58.4
Lsat_1_v5_gn_1_40040 Lactuca sativa HOM05D006964 ORTHO05D008861 8.1e-23 111.3 108 54.6
LjContig00081g0000792 Lotus japonicus HOM05D006964 ORTHO05D008861 8.1e-23 111.3 101 58.4
Nitab4.5_0000663g0200 Nicotiana tabacum HOM05D006964 ORTHO05D008861 8.1e-23 111.3 105 55.2
vmacro11021 Vaccinium macrocarpon HOM05D006964 ORTHO05D008861 8.1e-23 111.3 104 56.7
Sed0000140 Sechium edule HOM05D006964 ORTHO05D008861 1.1e-22 110.9 101 57.4
Ca_06492_v3 Cicer arietinum L. HOM05D006964 ORTHO05D008861 1.4e-22 110.5 101 58.4
arahy.Tifrunner.gnm1.ann1.EIVX2Z Arachis hypogaea HOM05D006964 ORTHO05D008861 1.8e-22 110.2 111 54.1
Dinv35124 Davidia involucrata HOM05D006964 ORTHO05D008861 1.8e-22 110.2 102 55.9
ATR0763G192 Amborella trichopoda HOM05D006964 ORTHO05D008861 3.1e-22 109.4 109 56.0
Solyc03g118320.1 Solanum lycopersicum HOM05D006964 ORTHO05D008861 3.1e-22 109.4 101 57.4
Actinidia35156 Actinidia chinensis HOM05D006964 ORTHO05D008861 4.0e-22 109.0 102 56.9
ClCG07G011010 Citrullus lanatus HOM05D006964 ORTHO05D008861 4.0e-22 109.0 101 56.4
SMO116G0181 Selaginella moellendorffii HOM05D006964 ORTHO05D008861 4.0e-22 109.0 102 55.9
TPR.G35899 Trifolium pratense HOM05D006964 ORTHO05D008861 4.0e-22 109.0 101 56.4
Cfa016256 Carpinus fangiana HOM05D006964 ORTHO05D008861 5.3e-22 108.6 103 56.3
Haze_00006 Corylus avellana HOM05D006964 ORTHO05D008861 5.3e-22 108.6 103 56.3
Eucgr.A00951 Eucalyptus grandis HOM05D006964 ORTHO05D008861 5.3e-22 108.6 102 57.8
FAN18G1087 Fragaria x ananassa HOM05D006964 ORTHO05D008861 5.3e-22 108.6 101 56.4
Nitab4.5_0000660g0010 Nicotiana tabacum HOM05D006964 ORTHO05D008861 5.3e-22 108.6 105 53.3
PGR031G2089 Punica granatum HOM05D006964 ORTHO05D008861 5.3e-22 108.6 101 55.4
Atru.chr8.1035 Acer truncatum HOM05D006964 ORTHO05D008861 6.9e-22 108.2 102 55.9
FvH4_5g33930 Fragaria vesca HOM05D006964 ORTHO05D008861 6.9e-22 108.2 101 55.4
FAN08G0714 Fragaria x ananassa HOM05D006964 ORTHO05D008861 6.9e-22 108.2 101 55.4
HanXRQChr11g0342451 Helianthus annuus HOM05D006964 ORTHO05D008861 6.9e-22 108.2 101 53.5
Lj1A623T74 Lonicera japonica HOM05D006964 ORTHO05D008861 6.9e-22 108.2 102 55.9
Lalb_Chr10g0101591 Lupinus albus HOM05D006964 ORTHO05D008861 6.9e-22 108.2 101 57.4
Potri.011G023800 Populus trichocarpa HOM05D006964 ORTHO05D008861 6.9e-22 108.2 101 56.4
RcHm_v2.0_Chr7g0233321 Rosa chinensis HOM05D006964 ORTHO05D008861 6.9e-22 108.2 101 55.4
Aqoxy7G03560 Aquilegia oxysepala HOM05D006964 ORTHO05D008861 1.5e-21 107.1 112 51.8
Carub.0001s2577 Capsella rubella HOM05D006964 ORTHO05D008861 1.5e-21 107.1 111 53.2
Ciclev10011398m.g Citrus clementina HOM05D006964 ORTHO05D008861 1.5e-21 107.1 101 53.5
Glyma.14G003100 Glycine max HOM05D006964 ORTHO05D008861 1.5e-21 107.1 101 57.4
Cc11_g00270 Coffea canephora HOM05D006964 ORTHO05D008861 2.0e-21 106.7 102 53.9
CsaV3_4G007230 Cucumis sativus L. HOM05D006964 ORTHO05D008861 2.0e-21 106.7 101 54.5
Medtr5g098850 Medicago truncatula HOM05D006964 ORTHO05D008861 2.0e-21 106.7 101 55.4
Rhsim02G0171800 Rhododendron simsii HOM05D006964 ORTHO05D008861 2.0e-21 106.7 104 54.8
THA.LOC104827506 Tarenaya hassleriana HOM05D006964 ORTHO05D008861 2.0e-21 106.7 103 55.3
GSVIVG01015905001 Vitis vinifera HOM05D006964 ORTHO05D008861 2.0e-21 106.7 102 55.9
Manes.16G000700 Manihot esculenta HOM05D006964 ORTHO05D008861 2.6e-21 106.3 101 54.5
Oeu061991.1 Olea europaea HOM05D006964 ORTHO05D008861 2.6e-21 106.3 102 55.9
Sabra11G0014800 Salix brachista HOM05D006964 ORTHO05D008861 2.6e-21 106.3 101 55.4
SalBow7G2824 Salvia bowleyana HOM05D006964 ORTHO05D008861 2.6e-21 106.3 104 57.7
Cpa.g.sc332.3 Carica papaya HOM05D006964 ORTHO05D008861 3.4e-21 105.9 101 57.4
Thecc.01G176000 Theobroma cacao HOM05D006964 ORTHO05D008861 3.4e-21 105.9 102 52.9
EL10Ac6g15329 Beta vulgaris HOM05D006964 ORTHO05D008861 4.5e-21 105.5 102 54.9
Peaxi162Scf00314g00515 Petunia axillaris HOM05D006964 ORTHO05D008861 4.5e-21 105.5 100 55.0
unitig_699.g19570 Utricularia gibba HOM05D006964 ORTHO05D008861 4.5e-21 105.5 102 52.9
Phvul.008G290000 Phaseolus vulgaris HOM05D006964 ORTHO05D008861 5.8e-21 105.1 101 54.5
Nitab4.5_0004302g0010 Nicotiana tabacum HOM05D006964 ORTHO05D008861 7.6e-21 104.8 105 53.3
Psat2g001680 Pisum sativum HOM05D006964 ORTHO05D008861 7.6e-21 104.8 113 51.3
COL.COLO4_20003 Corchorus olitorius HOM05D006964 ORTHO05D008861 9.9e-21 104.4 102 52.9
Aa31LG7G9960 Aethionema arabicum HOM05D006964 ORTHO05D008861 1.7e-20 103.6 112 51.8
AL1G40630 Arabidopsis lyrata HOM05D006964 ORTHO05D008861 2.2e-20 103.2 104 53.8
Gohir.D08G060500 Gossypium hirsutum HOM05D006964 ORTHO05D008861 2.2e-20 103.2 102 52.9
Gorai.004G062600 Gossypium raimondii HOM05D006964 ORTHO05D008861 2.2e-20 103.2 102 52.9
Ah.02g121270 Amaranthus hybridus HOM05D006964 ORTHO05D008861 2.9e-20 102.8 102 53.9
AT1G24290 Arabidopsis thaliana HOM05D006964 ORTHO05D008861 2.9e-20 102.8 104 52.9
MD03G1299000 Malus domestica HOM05D006964 ORTHO05D008861 2.9e-20 102.8 103 54.4
ECA234G0414 Erigeron canadensis HOM05D006964 ORTHO05D008861 4.9e-20 102.1 108 50.0
BcaB03g13997 Brassica carinata HOM05D006964 ORTHO05D008861 8.4e-20 101.3 104 51.0
AUR62003549 Chenopodium quinoa HOM05D006964 ORTHO05D008861 8.4e-20 101.3 102 53.9
Thhalv10009719m.g Eutrema salsugineum HOM05D006964 ORTHO05D008861 8.4e-20 101.3 105 53.3
Gohir.A08G050700 Gossypium hirsutum HOM05D006964 ORTHO05D008861 8.4e-20 101.3 101 52.5
CARHR026810 Cardamine hirsuta HOM05D006964 ORTHO05D008861 1.1e-19 100.9 104 52.9
AUR62017863 Chenopodium quinoa HOM05D006964 ORTHO05D008861 1.1e-19 100.9 102 52.0
Hma1.2p1_0391F.1_g142860 Hydrangea macrophylla HOM05D006964 ORTHO05D008861 2.5e-19 99.8 103 52.4
SGA_v2.0_scaffold73G24408 Striga asiatica HOM05D006964 ORTHO05D008861 2.5e-19 99.8 102 51.0
A07p12030 Brassica napus HOM05D006964 ORTHO05D008861 3.2e-19 99.4 111 49.5
BraA07t28989Z Brassica rapa HOM05D006964 ORTHO05D008861 3.2e-19 99.4 111 49.5
Sp1g23470 Schrenkiella parvula HOM05D006964 ORTHO05D008861 3.2e-19 99.4 104 51.0
BcaC06g35275 Brassica carinata HOM05D006964 ORTHO05D008861 4.2e-19 99.0 103 51.5
BolC7t42303H Brassica oleracea HOM05D006964 ORTHO05D008861 4.2e-19 99.0 103 51.5
PSO677G0001 Papaver somniferum HOM05D006964 ORTHO05D008861 5.5e-19 98.6 119 50.4
C07p17970 Brassica napus HOM05D006964 ORTHO05D008861 7.1e-19 98.2 103 51.5
SHI28197 Sapria himalayana HOM05D006964 ORTHO05D008861 1.3e-17 94.0 102 52.9
HPP92_016414 Vanilla planifolia HOM05D006964 ORTHO05D008861 7.4e-16 88.2 73 61.6
Actinidia18866 Actinidia chinensis HOM05D006964 ORTHO05D008861 3.1e-14 82.8 93 48.4
MD11G1318300 Malus domestica HOM05D006964 ORTHO05D008861 6.5e-12 75.1 62 59.7
DCAR_005902 Daucus carota HOM05D006964 ORTHO05D008861 7.1e-11 71.6 103 42.7
PGSC0003DMG400021041 Solanum tuberosum HOM05D006964 ORTHO05D008861 1.8e-09 67.0 44 70.5
Cfa024934 Carpinus fangiana HOM05D006964 ORTHO05D008861 2.3e-09 66.6 104 37.5
Haze_26752 Corylus avellana HOM05D006964 ORTHO05D008861 1.1e-06 57.8 92 37.0
Ca_28576_v3 Cicer arietinum L. HOM05D006964 ORTHO05D008861 9.0e-06 54.7 69 43.5


User provided reference genes

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