Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c6_24500 Physcomitrium patens HOM05D005526 ORTHO05D006802 8.7e-51 203.4 105 100.0
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 6.5e-30 134.0 110 70.0
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 7.2e-13 77.4 103 46.6
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 2.3e-11 72.4 70 52.9
GSVIVG01017251001 Vitis vinifera HOM05D005526 ORTHO05D006802 4.0e-11 71.6 107 43.0
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 6.8e-11 70.9 102 43.1
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 6.8e-11 70.9 74 50.0
ATR1156G007 Amborella trichopoda HOM05D005526 ORTHO05D006802 8.8e-11 70.5 78 50.0
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 1.2e-10 70.1 95 42.1
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 1.2e-10 70.1 78 46.2
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 1.2e-10 70.1 106 42.5
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 1.2e-10 70.1 109 41.3
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 1.5e-10 69.7 74 52.7
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 1.5e-10 69.7 110 40.0
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 2.0e-10 69.3 70 50.0
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 2.0e-10 69.3 72 51.4
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 2.0e-10 69.3 109 42.2
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 2.6e-10 68.9 104 39.4
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 2.6e-10 68.9 69 55.1
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 2.6e-10 68.9 78 51.3
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 3.4e-10 68.6 80 43.8
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 3.4e-10 68.6 80 43.8
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 3.4e-10 68.6 80 43.8
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 3.4e-10 68.6 70 50.0
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 4.4e-10 68.2 104 43.3
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 4.4e-10 68.2 81 45.7
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 5.7e-10 67.8 74 47.3
AL2G41300 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 5.7e-10 67.8 76 46.1
AL3G17940 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 5.7e-10 67.8 76 46.1
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 5.7e-10 67.8 108 39.8
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 5.7e-10 67.8 74 47.3
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 7.5e-10 67.4 85 42.4
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 7.5e-10 67.4 72 47.2
CAN.G395.46 Capsicum annuum HOM05D005526 ORTHO05D006802 7.5e-10 67.4 70 48.6
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 7.5e-10 67.4 74 47.3
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 7.5e-10 67.4 77 50.6
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 7.5e-10 67.4 84 45.2
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 7.5e-10 67.4 90 45.6
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 7.5e-10 67.4 68 48.5
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 9.8e-10 67.0 72 47.2
HanXRQChr10g0303071 Helianthus annuus HOM05D005526 ORTHO05D006802 9.8e-10 67.0 73 50.7
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 9.8e-10 67.0 90 46.7
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 9.8e-10 67.0 79 49.4
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 9.8e-10 67.0 63 57.1
TPR.G37284 Trifolium pratense HOM05D005526 ORTHO05D006802 9.8e-10 67.0 68 52.9
Cc04_g04020 Coffea canephora HOM05D005526 ORTHO05D006802 1.3e-09 66.6 74 45.9
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 1.3e-09 66.6 71 47.9
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 1.3e-09 66.6 72 48.6
AagrBONN_evm.TU.Sc2ySwM_368.2431 Anthoceros agrestis HOM05D005526 ORTHO05D006802 1.7e-09 66.2 101 39.6
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 1.7e-09 66.2 72 47.2
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 1.7e-09 66.2 72 47.2
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 1.7e-09 66.2 72 47.2
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 1.7e-09 66.2 72 47.2
Oeu063802.2 Olea europaea HOM05D005526 ORTHO05D006802 1.7e-09 66.2 68 50.0
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 1.7e-09 66.2 72 50.0
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 1.7e-09 66.2 72 48.6
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 2.2e-09 65.9 79 44.3
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 2.2e-09 65.9 72 50.0
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 2.2e-09 65.9 74 45.9
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 2.8e-09 65.5 74 45.9
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 2.8e-09 65.5 74 47.3
Lalb_Chr14g0373681 Lupinus albus HOM05D005526 ORTHO05D006802 2.8e-09 65.5 72 55.6
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 2.8e-09 65.5 70 52.9
Sopen06g025270 Solanum pennellii HOM05D005526 ORTHO05D006802 2.8e-09 65.5 104 45.2
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 3.7e-09 65.1 74 44.6
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 3.7e-09 65.1 72 47.2
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 3.7e-09 65.1 69 47.8
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 3.7e-09 65.1 80 42.5
Carub.0002s2731 Capsella rubella HOM05D005526 ORTHO05D006802 4.9e-09 64.7 76 43.4
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 4.9e-09 64.7 67 49.3
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 6.3e-09 64.3 65 49.2
Haze_16513 Corylus avellana HOM05D005526 ORTHO05D006802 6.3e-09 64.3 73 46.6
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 6.3e-09 64.3 104 44.2
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 6.3e-09 64.3 76 47.4
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 6.3e-09 64.3 71 47.9
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 8.3e-09 63.9 60 53.3
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 8.3e-09 63.9 70 50.0
COL.COLO4_12896 Corchorus olitorius HOM05D005526 ORTHO05D006802 8.3e-09 63.9 73 46.6
Lj5C68G25 Lonicera japonica HOM05D005526 ORTHO05D006802 8.3e-09 63.9 69 46.4
HPP92_009843 Vanilla planifolia HOM05D005526 ORTHO05D006802 8.3e-09 63.9 77 49.4
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 1.1e-08 63.5 97 39.2
Psat5g300440 Pisum sativum HOM05D005526 ORTHO05D006802 1.1e-08 63.5 99 40.4
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 1.1e-08 63.5 76 46.1
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 1.4e-08 63.2 73 46.6
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 1.4e-08 63.2 93 38.7
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 1.8e-08 62.8 87 46.0
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 2.4e-08 62.4 95 41.1
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 2.4e-08 62.4 65 47.7
MELO3C017901.2 Cucumis melo HOM05D005526 ORTHO05D006802 3.1e-08 62.0 67 47.8
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 3.1e-08 62.0 67 47.8
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 3.1e-08 62.0 73 46.6
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 4.1e-08 61.6 104 37.5
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 5.4e-08 61.2 80 43.8
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 5.4e-08 61.2 80 43.8
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 7.0e-08 60.8 56 53.6
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 1.6e-07 59.7 51 52.9
SMO196G0028 Selaginella moellendorffii HOM05D005526 ORTHO05D006802 1.6e-07 59.7 88 43.2
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 2.7e-07 58.9 56 51.8
RcHm_v2.0_Chr2g0136621 Rosa chinensis HOM05D005526 ORTHO05D006802 1.3e-06 56.6 75 45.3
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 1.7e-06 56.2 78 46.2
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 3.8e-06 55.1 41 61.0


User provided reference genes

Program Settings