Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c4_25340 Physcomitrium patens HOM05D002159 ORTHO05D318696 9.2e-33 142.9 69 100.0
Pp3c26_4810 Physcomitrium patens HOM05D002159 ORTHO05D007297 1.7e-18 95.5 58 77.6
SEGI_25051 Sequoiadendron giganteum HOM05D002159 ORTHO05D007297 1.9e-09 65.5 60 56.7
Mapoly0019s0103 Marchantia polymorpha HOM05D002159 ORTHO05D007297 3.2e-09 64.7 60 56.7
CBR_g26327 Chara braunii HOM05D002159 ORTHO05D007297 1.6e-08 62.4 58 48.3
MBI18_g21568_MAGBIO Magnolia biondii HOM05D002159 ORTHO05D007297 6.0e-08 60.5 60 50.0
AUR62015963 Chenopodium quinoa HOM05D002159 ORTHO05D007297 7.9e-08 60.1 58 50.0
CSS0043865 Camellia sinensis var. sinensis HOM05D002159 ORTHO05D007297 1.0e-07 59.7 61 52.5
HanXRQChr04g0099211 Helianthus annuus HOM05D002159 ORTHO05D007297 1.3e-07 59.3 60 51.7
TWI14G1085 Tripterygium wilfordii HOM05D002159 ORTHO05D007297 1.8e-07 58.9 60 55.0
Eucgr.A02776 Eucalyptus grandis HOM05D002159 ORTHO05D007297 3.0e-07 58.2 60 55.0
unitig_37.g11965 Utricularia gibba HOM05D002159 ORTHO05D007297 3.0e-07 58.2 60 50.0
CDE04G3161 Ceratophyllum demersum HOM05D002159 ORTHO05D007297 3.9e-07 57.8 59 49.2
PSO782G4503 Papaver somniferum HOM05D002159 ORTHO05D007297 3.9e-07 57.8 60 48.3
Hund04760 Selenicereus undatus HOM05D002159 ORTHO05D007297 3.9e-07 57.8 60 53.3
HPP92_014727 Vanilla planifolia HOM05D002159 ORTHO05D007297 3.9e-07 57.8 58 48.3
AL7G18160 Arabidopsis lyrata HOM05D002159 ORTHO05D007297 5.1e-07 57.4 60 51.7
AT4G33410 Arabidopsis thaliana HOM05D002159 ORTHO05D007297 5.1e-07 57.4 60 51.7
Thhalv10025502m.g Eutrema salsugineum HOM05D002159 ORTHO05D007297 5.1e-07 57.4 60 50.0
PSO478G4076 Papaver somniferum HOM05D002159 ORTHO05D007297 5.1e-07 57.4 60 48.3
TAR629G2977 Trochodendron aralioides HOM05D002159 ORTHO05D007297 5.1e-07 57.4 60 48.3
ATR0680G136 Amborella trichopoda HOM05D002159 ORTHO05D007297 6.7e-07 57.0 60 48.3
CiPaw.03G108000 Carya illinoinensis HOM05D002159 ORTHO05D007297 6.7e-07 57.0 60 50.0
Actinidia03126 Actinidia chinensis HOM05D002159 ORTHO05D007297 8.7e-07 56.6 60 50.0
CAN.G1175.1 Capsicum annuum HOM05D002159 ORTHO05D007297 8.7e-07 56.6 67 44.8
Ca_10747_v3 Cicer arietinum L. HOM05D002159 ORTHO05D007297 8.7e-07 56.6 60 51.7
Phvul.007G071800 Phaseolus vulgaris HOM05D002159 ORTHO05D007297 8.7e-07 56.6 60 51.7
arahy.Tifrunner.gnm1.ann1.D3UWCH Arachis hypogaea HOM05D002159 ORTHO05D007297 1.1e-06 56.2 60 51.7
arahy.Tifrunner.gnm1.ann1.UN08B9 Arachis hypogaea HOM05D002159 ORTHO05D007297 1.1e-06 56.2 60 51.7
EL10Ac3g05615 Beta vulgaris HOM05D002159 ORTHO05D007297 1.1e-06 56.2 60 50.0
Glyma.10G234200 Glycine max HOM05D002159 ORTHO05D007297 1.1e-06 56.2 60 51.7
Glyma.20G160100 Glycine max HOM05D002159 ORTHO05D007297 1.1e-06 56.2 60 51.7
Lj5g0012518 Lotus japonicus HOM05D002159 ORTHO05D007297 1.1e-06 56.2 60 51.7
BcaB03g12799 Brassica carinata HOM05D002159 ORTHO05D007297 1.5e-06 55.8 60 48.3
Cfa023191 Carpinus fangiana HOM05D002159 ORTHO05D005625 1.5e-06 55.8 60 48.3
CiPaw.04G072000 Carya illinoinensis HOM05D002159 ORTHO05D007297 1.5e-06 55.8 60 50.0
COL.COLO4_25865 Corchorus olitorius HOM05D002159 ORTHO05D007297 1.5e-06 55.8 60 51.7
Os10g0393100 Oryza sativa ssp. japonica HOM05D002159 ORTHO05D007297 1.5e-06 55.8 60 45.0
Prupe.2G296100 Prunus persica HOM05D002159 ORTHO05D007297 1.5e-06 55.8 60 50.0
Sc13g0008810 Simmondsia chinensis HOM05D002159 ORTHO05D007297 1.5e-06 55.8 60 46.7
VMungo0720G1061 Vigna mungo HOM05D002159 ORTHO05D007297 1.5e-06 55.8 60 51.7
A01p04880 Brassica napus HOM05D002159 ORTHO05D007297 1.9e-06 55.5 60 50.0
CAN.G307.29 Capsicum annuum HOM05D002159 ORTHO05D007297 1.9e-06 55.5 67 43.3
ClCG05G008130 Citrullus lanatus HOM05D002159 ORTHO05D007297 1.9e-06 55.5 59 50.8
Cc02_g02810 Coffea canephora HOM05D002159 ORTHO05D007297 1.9e-06 55.5 58 46.6
Dinv28422 Davidia involucrata HOM05D002159 ORTHO05D007297 1.9e-06 55.5 60 48.3
Sp7g31110 Schrenkiella parvula HOM05D002159 ORTHO05D007297 1.9e-06 55.5 60 50.0
vmacro09831 Vaccinium macrocarpon HOM05D002159 ORTHO05D007297 1.9e-06 55.5 60 46.7
Atru.chr1.431 Acer truncatum HOM05D002159 ORTHO05D007297 2.5e-06 55.1 60 48.3
BcaC09g52153 Brassica carinata HOM05D002159 ORTHO05D007297 2.5e-06 55.1 60 48.3
C01p05280 Brassica napus HOM05D002159 ORTHO05D007297 2.5e-06 55.1 60 48.3
BolC1t00507H Brassica oleracea HOM05D002159 ORTHO05D007297 2.5e-06 55.1 60 48.3
CARHR241460 Cardamine hirsuta HOM05D002159 ORTHO05D007297 2.5e-06 55.1 60 50.0
Gohir.A12G256800 Gossypium hirsutum HOM05D002159 ORTHO05D007297 2.5e-06 55.1 60 48.3
Medtr1g100980 Medicago truncatula HOM05D002159 ORTHO05D007297 2.5e-06 55.1 60 50.0
PGR042G1227 Punica granatum HOM05D002159 ORTHO05D007297 2.5e-06 55.1 62 50.0
QL09p013821 Quercus lobata HOM05D002159 ORTHO05D007297 2.5e-06 55.1 60 48.3
TWI23G1271 Tripterygium wilfordii HOM05D002159 ORTHO05D007297 2.5e-06 55.1 60 51.7
Actinidia31826 Actinidia chinensis HOM05D002159 ORTHO05D007297 3.3e-06 54.7 60 48.3
Carub.0007s0708 Capsella rubella HOM05D002159 ORTHO05D007297 3.3e-06 54.7 60 48.3
Duzib205G0735 Durio zibethinus HOM05D002159 ORTHO05D007297 3.3e-06 54.7 60 50.0
Lj1C1000G16 Lonicera japonica HOM05D002159 ORTHO05D007297 3.3e-06 54.7 62 46.8
Nn1g01518 Nelumbo nucifera HOM05D002159 ORTHO05D007297 3.3e-06 54.7 62 48.4
Thecc.03G178900 Theobroma cacao HOM05D002159 ORTHO05D007297 3.3e-06 54.7 60 50.0
TPR.G26968 Trifolium pratense HOM05D002159 ORTHO05D007297 3.3e-06 54.7 60 51.7
Lsat_1_v5_gn_9_55320 Lactuca sativa HOM05D002159 ORTHO05D007297 4.3e-06 54.3 59 47.5
Lalb_Chr02g0141101 Lupinus albus HOM05D002159 ORTHO05D007297 4.3e-06 54.3 60 48.3
MD01G1203500 Malus domestica HOM05D002159 ORTHO05D007297 4.3e-06 54.3 60 48.3
Psat6g198120 Pisum sativum HOM05D002159 ORTHO05D007297 4.3e-06 54.3 60 50.0
SMO329G0052 Selaginella moellendorffii HOM05D002159 ORTHO05D007297 4.3e-06 54.3 60 48.3
TAR375G0726 Trochodendron aralioides HOM05D002159 ORTHO05D007297 4.3e-06 54.3 59 45.8
BcaNung02170 Brassica carinata HOM05D002159 ORTHO05D007297 5.6e-06 53.9 60 48.3
C07p59620 Brassica napus HOM05D002159 ORTHO05D007297 5.6e-06 53.9 60 48.3
BolC7t46407H Brassica oleracea HOM05D002159 ORTHO05D007297 5.6e-06 53.9 60 48.3
MELO3C006918.2 Cucumis melo HOM05D002159 ORTHO05D007297 5.6e-06 53.9 59 49.2
CsaV3_3G017210 Cucumis sativus L. HOM05D002159 ORTHO05D007297 5.6e-06 53.9 59 49.2
FAN10G0587 Fragaria x ananassa HOM05D002159 ORTHO05D007297 5.6e-06 53.9 60 48.3
MD07G1272800 Malus domestica HOM05D002159 ORTHO05D007297 5.6e-06 53.9 60 48.3
GSVIVG01028920001 Vitis vinifera HOM05D002159 ORTHO05D007297 5.6e-06 53.9 62 46.8
FAN01G0872 Fragaria x ananassa HOM05D002159 ORTHO05D005625 7.4e-06 53.5 60 48.3
FAN03G0284 Fragaria x ananassa HOM05D002159 ORTHO05D007297 7.4e-06 53.5 60 48.3
FAN03G0857 Fragaria x ananassa HOM05D002159 ORTHO05D005625 7.4e-06 53.5 60 48.3
FAN06G3579 Fragaria x ananassa HOM05D002159 ORTHO05D005625 7.4e-06 53.5 60 48.3
FAN06G4426 Fragaria x ananassa HOM05D002159 ORTHO05D005625 7.4e-06 53.5 60 48.3
FAN10G0118 Fragaria x ananassa HOM05D002159 ORTHO05D005625 7.4e-06 53.5 60 48.3
Lalb_Chr21g0305081 Lupinus albus HOM05D002159 ORTHO05D007297 7.4e-06 53.5 60 48.3
A03p61960 Brassica napus HOM05D002159 ORTHO05D007297 9.6e-06 53.1 62 48.4
BraA01t00470Z Brassica rapa HOM05D002159 ORTHO05D007297 9.6e-06 53.1 60 48.3
BraA03t15236Z Brassica rapa HOM05D002159 ORTHO05D007297 9.6e-06 53.1 62 48.4
Ciclev10005207m.g Citrus clementina HOM05D002159 ORTHO05D007297 9.6e-06 53.1 62 46.8
Gohir.D12G258100 Gossypium hirsutum HOM05D002159 ORTHO05D007297 9.6e-06 53.1 65 44.6
Gorai.008G276400 Gossypium raimondii HOM05D002159 ORTHO05D007297 9.6e-06 53.1 65 44.6
Lj8C239T3 Lonicera japonica HOM05D002159 ORTHO05D007297 9.6e-06 53.1 62 45.2
Rhsim09G0198600 Rhododendron simsii HOM05D002159 ORTHO05D007297 9.6e-06 53.1 60 45.0


User provided reference genes

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