Gene: ATR0680G136
General Information
Structural Information
- Species Amborella trichopoda
- Gene Identifier ATR0680G136
- Transcript Identifier ATR0680G136.1
- Gene Type Coding gene
- Location AmTr_v1.0_scaffold00009 : 6222093-6243502 : negative
Gene Family Information
- ID HOM05D002159
- #Genes/#Species 310/100
- Phylogenetic origin
- ID ORTHO05D007297
- #Genes/#Species 132/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id evm_27.TU.AmTr_v1.0_scaffold00009.248.v1.0
- pacid 31568690
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006378 | ISO | PLAZA Homology (enrichment) | mRNA polyadenylation | HOM05D002159 |
| GO:0006379 | ISO | PLAZA Homology (enrichment) | mRNA cleavage | HOM05D002159 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004190 | IEA | InterPro | aspartic-type endopeptidase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT4G33410 |
| GO:0005768 | ISO | PLAZA Integrative Orthology | endosome | AT4G33410 |
| GO:0005847 | ISO | PLAZA Homology (enrichment) | mRNA cleavage and polyadenylation specificity factor complex | HOM05D002159 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT4G33410 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 18.11.1.4 | Protein modification.targeting peptide maturation.endomembrane system.signal peptidase (SPP) |