Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c2_27600 Physcomitrium patens HOM05D003614 ORTHO05D004156 1.1e-306 1055.8 543 100.0
Pp3c15_3410 Physcomitrium patens HOM05D003614 ORTHO05D004156 7.3e-32 142.9 319 30.1
Pp3c2_1860 Physcomitrium patens HOM05D001560 ORTHO05D003613 3.7e-28 130.6 239 32.2
Nn1g04314 Nelumbo nucifera HOM05D003614 ORTHO05D004156 1.2e-15 89.0 279 25.1
Psat6g087880 Pisum sativum HOM05D003614 ORTHO05D004156 2.8e-15 87.8 204 27.0
Rhsim10G0199100 Rhododendron simsii HOM05D003614 ORTHO05D004156 2.8e-15 87.8 221 27.1
Rhsim03G0033800 Rhododendron simsii HOM05D003614 ORTHO05D004156 3.6e-15 87.4 281 24.6
AagrBONN_evm.TU.Sc2ySwM_344.1486 Anthoceros agrestis HOM05D001560 ORTHO05D003613 1.1e-14 85.9 178 33.7
Dinv04144 Davidia involucrata HOM05D003614 ORTHO05D004156 1.8e-14 85.1 214 25.7
Sc13g0001410 Simmondsia chinensis HOM05D003614 ORTHO05D004156 3.1e-14 84.3 209 28.2
MBI14_g19444_MAGBIO Magnolia biondii HOM05D003614 ORTHO05D004156 4.0e-14 84.0 305 25.9
Pp3c20_1870 Physcomitrium patens HOM05D003302 ORTHO05D003785 8.9e-14 82.8 272 25.0
Aqoxy5G04186 Aquilegia oxysepala HOM05D003614 ORTHO05D004156 1.5e-13 82.0 240 24.6
CAN.G1237.32 Capsicum annuum HOM05D003614 ORTHO05D004156 1.5e-13 82.0 208 23.6
Dinv00797 Davidia involucrata HOM05D003614 ORTHO05D004156 2.0e-13 81.6 214 24.8
Glyma.16G116350 Glycine max HOM05D003614 ORTHO05D004156 3.4e-13 80.9 204 27.0
CSS0031196 Camellia sinensis var. sinensis HOM05D003614 ORTHO05D004156 7.5e-13 79.7 251 23.9
DCAR_016966 Daucus carota HOM05D003614 ORTHO05D004156 7.5e-13 79.7 196 25.5
Actinidia39178 Actinidia chinensis HOM05D003614 ORTHO05D004156 9.8e-13 79.3 290 23.4
Oeu008197.1 Olea europaea HOM05D003614 ORTHO05D004156 9.8e-13 79.3 212 24.5
TAR580G0003 Trochodendron aralioides HOM05D003614 ORTHO05D004156 9.8e-13 79.3 279 23.3
Sopen03g006270 Solanum pennellii HOM05D003614 ORTHO05D004156 1.3e-12 79.0 208 24.5
PGSC0003DMG400022532 Solanum tuberosum HOM05D003614 ORTHO05D004156 1.3e-12 79.0 208 25.5
Lalb_Chr02g0142191 Lupinus albus HOM05D003614 ORTHO05D004156 1.7e-12 78.6 203 26.1
PGR142G0250 Punica granatum HOM05D003614 ORTHO05D004156 2.2e-12 78.2 208 25.5
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-12 78.2 154 32.5
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-12 78.2 154 32.5
TWI74G0330 Tripterygium wilfordii HOM05D003614 ORTHO05D004156 2.2e-12 78.2 211 25.6
CANSAT54G1064 Cannabis sativa HOM05D003614 ORTHO05D004156 2.9e-12 77.8 207 25.1
VMungo0720G1667 Vigna mungo HOM05D003614 ORTHO05D004156 3.7e-12 77.4 216 25.9
COL.COLO4_33914 Corchorus olitorius HOM05D003614 ORTHO05D004156 4.9e-12 77.0 242 23.1
Lsat_1_v5_gn_6_112880 Lactuca sativa HOM05D003614 ORTHO05D004156 4.9e-12 77.0 308 24.7
Ah.13g076640 Amaranthus hybridus HOM05D003614 ORTHO05D004156 6.4e-12 76.6 279 23.7
Manes.08G056200 Manihot esculenta HOM05D003614 ORTHO05D004156 6.4e-12 76.6 205 24.9
SHI37854 Sapria himalayana HOM05D001560 ORTHO05D003613 6.4e-12 76.6 142 33.8
TPR.G39706 Trifolium pratense HOM05D001560 ORTHO05D003613 8.3e-12 76.3 145 33.1
Haze_19741 Corylus avellana HOM05D003614 ORTHO05D004156 1.4e-11 75.5 206 24.3
Glyma.16G222000 Glycine max HOM05D003614 ORTHO05D004156 1.4e-11 75.5 204 26.5
MELO3C025378.2 Cucumis melo HOM05D003614 ORTHO05D004156 1.9e-11 75.1 208 23.6
Pp3c15_17460 Physcomitrium patens HOM05D003302 ORTHO05D003613 1.9e-11 75.1 273 25.6
Potri.006G043650 Populus trichocarpa HOM05D003614 ORTHO05D004156 1.9e-11 75.1 219 24.7
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 1.9e-11 75.1 147 32.0
SHI50746 Sapria himalayana HOM05D001560 ORTHO05D003613 1.9e-11 75.1 148 33.1
Thhalv10012522m.g Eutrema salsugineum HOM05D003614 ORTHO05D004156 2.4e-11 74.7 244 22.5
SHI36372 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-11 74.7 148 33.1
SHI37087 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-11 74.7 148 33.1
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-11 74.7 148 33.1
THA.LOC104823214 Tarenaya hassleriana HOM05D003614 ORTHO05D004156 2.4e-11 74.7 215 23.7
C09p72780 Brassica napus HOM05D003614 ORTHO05D004156 3.2e-11 74.3 206 24.3
BolC9t60016H Brassica oleracea HOM05D003614 ORTHO05D004156 3.2e-11 74.3 206 24.3
BraA07t31560Z Brassica rapa HOM05D003614 ORTHO05D004156 3.2e-11 74.3 290 25.9
Cfa016733 Carpinus fangiana HOM05D003614 ORTHO05D004156 3.2e-11 74.3 227 24.7
ClCG10G005410 Citrullus lanatus HOM05D003614 ORTHO05D004156 3.2e-11 74.3 219 22.8
SHI35978 Sapria himalayana HOM05D000743 ORTHO05D000580 3.2e-11 74.3 151 31.1
Aa31LG4G4600 Aethionema arabicum HOM05D003614 ORTHO05D004156 4.1e-11 73.9 295 26.4
QL07p005711 Quercus lobata HOM05D003614 ORTHO05D004156 4.1e-11 73.9 207 24.6
QL07p006066 Quercus lobata HOM05D003614 ORTHO05D004156 4.1e-11 73.9 207 24.6
Atru.chr1.1276 Acer truncatum HOM05D003614 ORTHO05D004156 5.4e-11 73.6 202 27.7
Sabra06G0029800 Salix brachista HOM05D003614 ORTHO05D004156 5.4e-11 73.6 219 24.7
SHI03570 Sapria himalayana HOM05D003614 ORTHO05D004156 7.1e-11 73.2 207 25.1
VMungo1127G0235 Vigna mungo HOM05D003614 ORTHO05D004156 7.1e-11 73.2 196 26.5
A07p40160 Brassica napus HOM05D003614 ORTHO05D004156 1.2e-10 72.4 290 25.9
BolC6t39880H Brassica oleracea HOM05D003614 ORTHO05D004156 1.2e-10 72.4 298 25.8
AL6G13670 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 1.6e-10 72.0 241 22.4
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 1.6e-10 72.0 138 34.1
Sed0022963 Sechium edule HOM05D003614 ORTHO05D004156 1.6e-10 72.0 215 24.7
AT5G04050 Arabidopsis thaliana HOM05D003614 ORTHO05D004156 2.1e-10 71.6 211 23.7
SGA_v2.0_scaffold94G28503 Striga asiatica HOM05D003614 ORTHO05D004156 2.1e-10 71.6 201 24.9
SHI36137 Sapria himalayana HOM05D000743 ORTHO05D000580 2.7e-10 71.2 149 30.9
Carub.0006s0300 Capsella rubella HOM05D003614 ORTHO05D004156 3.5e-10 70.9 245 23.7
Pp3c6_21460 Physcomitrium patens HOM05D003302 ORTHO05D003785 3.5e-10 70.9 279 24.7
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 6.0e-10 70.1 138 33.3
BraA10t45251Z Brassica rapa HOM05D003614 ORTHO05D004156 6.0e-10 70.1 205 23.4
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 6.0e-10 70.1 138 33.3
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 6.0e-10 70.1 138 34.1
CiPaw.09G043900 Carya illinoinensis HOM05D003614 ORTHO05D004156 6.0e-10 70.1 213 23.9
AT1G74350 Arabidopsis thaliana HOM05D003614 ORTHO05D004156 7.8e-10 69.7 290 26.9
Duzib128G0580 Durio zibethinus HOM05D003614 ORTHO05D004156 7.8e-10 69.7 203 23.2
QL03p003467 Quercus lobata HOM05D003614 ORTHO05D004156 7.8e-10 69.7 213 23.9
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 1.0e-09 69.3 144 34.0
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 1.0e-09 69.3 144 34.0
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 1.0e-09 69.3 144 34.0
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 1.0e-09 69.3 144 34.0
C06p48510 Brassica napus HOM05D003614 ORTHO05D004156 1.7e-09 68.6 301 25.2
ATR0580G046 Amborella trichopoda HOM05D003614 ORTHO05D004156 2.3e-09 68.2 195 24.1
SHI37136 Sapria himalayana HOM05D001560 ORTHO05D003613 2.3e-09 68.2 149 28.9
Sp6g38700 Schrenkiella parvula HOM05D003614 ORTHO05D004156 2.3e-09 68.2 244 21.7
Lsat_1_v5_gn_5_158800 Lactuca sativa HOM05D003614 ORTHO05D004156 5.1e-09 67.0 218 22.0
HanXRQChr10g0297191 Helianthus annuus HOM05D001560 ORTHO05D003613 6.6e-09 66.6 124 34.7
Oeu051780.2 Olea europaea HOM05D001560 ORTHO05D003613 6.6e-09 66.6 128 32.8
HPP92_012753 Vanilla planifolia HOM05D003614 ORTHO05D004156 6.6e-09 66.6 197 23.4
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 8.6e-09 66.2 130 32.3
DCAR_014331 Daucus carota HOM05D003614 ORTHO05D004156 8.6e-09 66.2 306 23.9
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 8.6e-09 66.2 124 33.9
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 8.6e-09 66.2 124 33.9
RhsimMtG0005500 Rhododendron simsii HOM05D001560 ORTHO05D003613 8.6e-09 66.2 124 33.9
Sp5g29510 Schrenkiella parvula HOM05D003614 ORTHO05D004156 8.6e-09 66.2 291 26.5
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 1.1e-08 65.9 124 33.9
Peaxi162Scf00130g01210 Petunia axillaris HOM05D003614 ORTHO05D004156 1.1e-08 65.9 192 24.5
AL2G34200 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 1.5e-08 65.5 307 25.1
SEGI_09252 Sequoiadendron giganteum HOM05D003614 ORTHO05D004156 1.5e-08 65.5 319 22.9
HanXRQChr08g0236201 Helianthus annuus HOM05D001560 ORTHO05D003613 1.9e-08 65.1 124 33.1
Hma1.2p1_0079F.1_g041900 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 1.9e-08 65.1 124 33.9
Ah.01g011700 Amaranthus hybridus HOM05D001560 ORTHO05D003613 2.5e-08 64.7 124 33.1
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 2.5e-08 64.7 124 33.1
FvH4_2g28480 Fragaria vesca HOM05D001560 ORTHO05D003613 2.5e-08 64.7 124 33.9
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 2.5e-08 64.7 124 33.9
Lj1P1115T19 Lonicera japonica HOM05D003614 ORTHO05D004156 3.3e-08 64.3 171 25.7
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 5.6e-08 63.5 124 33.9
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 7.3e-08 63.2 124 33.1
ECA248G3258 Erigeron canadensis HOM05D003614 ORTHO05D004156 7.3e-08 63.2 212 22.2
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 9.5e-08 62.8 124 33.9
Nn4g26009 Nelumbo nucifera HOM05D001560 ORTHO05D003613 9.5e-08 62.8 124 33.9
BcaC08g46865 Brassica carinata HOM05D003614 ORTHO05D004156 1.2e-07 62.4 285 27.4
SEGI_08289 Sequoiadendron giganteum HOM05D003614 ORTHO05D004156 1.2e-07 62.4 303 22.4
SEGI_12312 Sequoiadendron giganteum HOM05D003614 ORTHO05D004156 1.2e-07 62.4 303 22.4
GSVIVG01033568001 Vitis vinifera HOM05D003614 ORTHO05D004156 1.2e-07 62.4 166 24.7
arahy.Tifrunner.gnm1.ann1.8A3W3K Arachis hypogaea HOM05D003614 ORTHO05D004156 1.6e-07 62.0 300 23.7
vmacro23496 Vaccinium macrocarpon HOM05D003614 ORTHO05D004156 2.1e-07 61.6 231 22.9
ATR0691G002 Amborella trichopoda HOM05D003614 ORTHO05D004156 2.8e-07 61.2 221 23.5
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 2.8e-07 61.2 119 32.8
ClCG10G004710 Citrullus lanatus HOM05D001560 ORTHO05D003613 2.8e-07 61.2 119 32.8
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.8e-07 61.2 124 32.3
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.8e-07 61.2 124 32.3
Hund29341 Selenicereus undatus HOM05D001560 ORTHO05D003613 2.8e-07 61.2 124 32.3
Lalb_Chr21g0312211 Lupinus albus HOM05D003614 ORTHO05D004156 3.6e-07 60.8 274 23.7
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 8.1e-07 59.7 118 32.2
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 1.4e-06 58.9 123 30.1
Cfa002904 Carpinus fangiana HOM05D003614 ORTHO05D004156 3.1e-06 57.8 306 21.6
PSO017G5444 Papaver somniferum HOM05D003614 ORTHO05D004156 3.1e-06 57.8 279 20.4
Pp3c26_11300 Physcomitrium patens HOM05D003302 ORTHO05D003785 3.1e-06 57.8 206 25.2
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.0e-06 57.4 117 30.8
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 6.8e-06 56.6 133 30.1
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 6.8e-06 56.6 117 30.8
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 6.8e-06 56.6 117 30.8
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 6.8e-06 56.6 117 30.8
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 6.8e-06 56.6 117 30.8
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 6.8e-06 56.6 117 30.8
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 6.8e-06 56.6 117 30.8
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 6.8e-06 56.6 117 30.8
Haze_25257 Corylus avellana HOM05D003614 ORTHO05D004156 8.9e-06 56.2 301 22.3


User provided reference genes

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