Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c20_8030 Physcomitrium patens HOM05D004674 ORTHO05D007261 0.0e+00 1429.5 743 100.0
SMO367G0601 Selaginella moellendorffii HOM05D004674 ORTHO05D007261 1.8e-251 872.8 738 62.5
Glyma.02G053800 Glycine max HOM05D004674 ORTHO05D007261 2.4e-251 872.5 741 61.3
Zm00001eb225760 Zea mays HOM05D004674 ORTHO05D007261 6.9e-251 870.9 737 63.4
TWI09G0339 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 4.5e-250 868.2 755 60.5
Gorai.007G201200 Gossypium raimondii HOM05D004674 ORTHO05D007261 1.0e-249 867.1 750 59.5
VMungo0251G2099 Vigna mungo HOM05D004674 ORTHO05D007261 2.2e-249 865.9 746 60.6
GSVIVG01018892001 Vitis vinifera HOM05D004674 ORTHO05D007261 2.9e-249 865.5 746 60.6
Lalb_Chr16g0391041 Lupinus albus HOM05D004674 ORTHO05D007261 3.8e-249 865.1 759 60.3
COL.COLO4_22030 Corchorus olitorius HOM05D004674 ORTHO05D007261 1.4e-248 863.2 753 59.0
Os06g0472400 Oryza sativa ssp. japonica HOM05D004674 ORTHO05D007261 2.5e-248 862.4 750 61.3
Gohir.A11G182300 Gossypium hirsutum HOM05D004674 ORTHO05D007261 4.2e-248 861.7 750 59.3
Medtr8g076950 Medicago truncatula HOM05D004674 ORTHO05D007261 5.5e-248 861.3 746 59.9
SEGI_40838 Sequoiadendron giganteum HOM05D004674 ORTHO05D007261 1.6e-247 859.8 846 55.7
TPR.G21548 Trifolium pratense HOM05D004674 ORTHO05D007261 3.0e-246 855.5 746 59.5
Lj4g0022194 Lotus japonicus HOM05D004674 ORTHO05D007261 5.1e-246 854.7 755 60.1
CANSAT01G1299 Cannabis sativa HOM05D004674 ORTHO05D007261 1.1e-245 853.6 750 59.6
Gohir.D11G189100 Gossypium hirsutum HOM05D004674 ORTHO05D007261 2.5e-245 852.4 758 58.4
TAR376G0875 Trochodendron aralioides HOM05D004674 ORTHO05D007261 4.3e-245 851.7 745 60.0
Potri.007G021000 Populus trichocarpa HOM05D004674 ORTHO05D007261 5.7e-245 851.3 743 59.2
Prupe.7G158600 Prunus persica HOM05D004674 ORTHO05D007261 5.7e-245 851.3 746 59.5
Lsat_1_v5_gn_4_148020 Lactuca sativa HOM05D004674 ORTHO05D007261 7.4e-245 850.9 747 58.6
HPP92_004908 Vanilla planifolia HOM05D004674 ORTHO05D007261 7.4e-245 850.9 749 58.9
Sed0001139 Sechium edule HOM05D004674 ORTHO05D007261 2.1e-244 849.4 749 58.7
arahy.Tifrunner.gnm1.ann1.LKR1Y0 Arachis hypogaea HOM05D004674 ORTHO05D007261 2.8e-244 849.0 752 59.4
PGSC0003DMG400015491 Solanum tuberosum HOM05D004674 ORTHO05D007261 3.7e-244 848.6 747 60.6
Aqoxy5G01578 Aquilegia oxysepala HOM05D004674 ORTHO05D007261 4.8e-244 848.2 747 59.2
Duzib264G1222 Durio zibethinus HOM05D004674 ORTHO05D007261 6.3e-244 847.8 745 58.4
HanXRQChr09g0261191 Helianthus annuus HOM05D004674 ORTHO05D007261 6.3e-244 847.8 742 59.7
THA.LOC104821303 Tarenaya hassleriana HOM05D004674 ORTHO05D007261 6.3e-244 847.8 754 59.8
BcaB02g10033 Brassica carinata HOM05D004674 ORTHO05D007261 1.1e-243 847.0 746 60.9
Cpa.g.sc6.166 Carica papaya HOM05D004674 ORTHO05D007261 1.1e-243 847.0 756 58.6
FAN26G2871 Fragaria x ananassa HOM05D004674 ORTHO05D007261 1.8e-243 846.3 750 60.3
Sopen02g013570 Solanum pennellii HOM05D004674 ORTHO05D007261 1.8e-243 846.3 747 60.8
CSS0017426 Camellia sinensis var. sinensis HOM05D004674 ORTHO05D007261 2.4e-243 845.9 736 60.2
CAN.G1019.6 Capsicum annuum HOM05D004674 ORTHO05D007261 2.4e-243 845.9 750 60.0
RcHm_v2.0_Chr2g0100861 Rosa chinensis HOM05D004674 ORTHO05D007261 3.1e-243 845.5 748 60.0
Migut.H02523 Erythranthe guttata HOM05D004674 ORTHO05D007261 9.0e-243 844.0 752 59.8
Ciclev10024970m.g Citrus clementina HOM05D004674 ORTHO05D007261 1.5e-242 843.2 745 59.5
Peaxi162Scf00008g03325 Petunia axillaris HOM05D004674 ORTHO05D007261 1.5e-242 843.2 741 60.1
Sabra07G0018000 Salix brachista HOM05D004674 ORTHO05D007261 2.0e-242 842.8 741 58.7
CiPaw.07G049300 Carya illinoinensis HOM05D004674 ORTHO05D007261 2.6e-242 842.4 750 58.9
DCAR_017308 Daucus carota HOM05D004674 ORTHO05D007261 2.6e-242 842.4 755 59.6
Thhalv10003695m.g Eutrema salsugineum HOM05D004674 ORTHO05D007261 3.4e-242 842.0 759 59.3
Solyc02g062560.3 Solanum lycopersicum HOM05D004674 ORTHO05D007261 3.4e-242 842.0 744 60.3
Ca_22335_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 4.5e-242 841.6 737 60.0
Cfa006896 Carpinus fangiana HOM05D004674 ORTHO05D007261 7.6e-242 840.9 748 59.2
Haze_03856 Corylus avellana HOM05D004674 ORTHO05D007261 7.6e-242 840.9 748 59.8
Nn5g29687 Nelumbo nucifera HOM05D004674 ORTHO05D007261 1.0e-241 840.5 743 60.2
PSO170G5809 Papaver somniferum HOM05D004674 ORTHO05D007261 1.0e-241 840.5 746 58.8
QL06p035418 Quercus lobata HOM05D004674 ORTHO05D007261 1.3e-241 840.1 748 58.2
arahy.Tifrunner.gnm1.ann1.SG067W Arachis hypogaea HOM05D004674 ORTHO05D007261 1.7e-241 839.7 785 57.2
Carub.0008s2809 Capsella rubella HOM05D004674 ORTHO05D007261 1.7e-241 839.7 753 59.5
ECA232G2544 Erigeron canadensis HOM05D004674 ORTHO05D000001 1.7e-241 839.7 735 60.3
SalBow8G5199 Salvia bowleyana HOM05D004674 ORTHO05D007261 2.2e-241 839.3 751 60.3
Sc16g0002550 Simmondsia chinensis HOM05D004674 ORTHO05D007261 3.8e-241 838.6 748 59.4
Nitab4.5_0000136g0250 Nicotiana tabacum HOM05D004674 ORTHO05D007261 6.5e-241 837.8 772 58.9
QL06p035429 Quercus lobata HOM05D004674 ORTHO05D007261 6.5e-241 837.8 748 58.3
Oeu019445.1 Olea europaea HOM05D004674 ORTHO05D007261 8.5e-241 837.4 758 59.2
SalBow8G1271 Salvia bowleyana HOM05D004674 ORTHO05D007261 8.5e-241 837.4 751 60.2
Cc07_g09910 Coffea canephora HOM05D004674 ORTHO05D007261 1.1e-240 837.0 741 59.0
Eucgr.I02404 Eucalyptus grandis HOM05D004674 ORTHO05D007261 1.4e-240 836.6 748 59.0
FAN23G0750 Fragaria x ananassa HOM05D004674 ORTHO05D007261 3.2e-240 835.5 756 59.9
A07p17540 Brassica napus HOM05D004674 ORTHO05D007261 4.2e-240 835.1 749 59.8
C07p25500 Brassica napus HOM05D004674 ORTHO05D007261 1.2e-239 833.6 749 59.5
BraA07t29474Z Brassica rapa HOM05D004674 ORTHO05D007261 1.2e-239 833.6 749 59.8
AL8G45110 Arabidopsis lyrata HOM05D004674 ORTHO05D007261 1.6e-239 833.2 754 59.0
MD15G1256300 Malus domestica HOM05D004674 ORTHO05D007261 3.6e-239 832.0 758 57.5
Atru.chr3.699 Acer truncatum HOM05D004674 ORTHO05D007261 4.6e-239 831.6 745 58.3
EL10As8g23909 Beta vulgaris HOM05D004674 ORTHO05D007261 1.0e-238 830.5 756 58.3
AT5G66420 Arabidopsis thaliana HOM05D004674 ORTHO05D007261 1.3e-238 830.1 751 58.9
CsaV3_6G046560 Cucumis sativus L. HOM05D004674 ORTHO05D007261 3.9e-238 828.6 756 57.3
Hund16446 Selenicereus undatus HOM05D004674 ORTHO05D007261 6.7e-238 827.8 780 56.5
BolC7t43070H Brassica oleracea HOM05D004674 ORTHO05D007261 1.5e-237 826.6 749 58.9
MSTRG.2485 Avicennia marina HOM05D004674 ORTHO05D007261 1.9e-237 826.2 751 59.0
BcaC06g34697 Brassica carinata HOM05D004674 ORTHO05D007261 2.5e-237 825.9 749 59.0
Nitab4.5_0001525g0030 Nicotiana tabacum HOM05D004674 ORTHO05D007261 2.2e-236 822.8 720 61.4
PGR119G1113 Punica granatum HOM05D004674 ORTHO05D007261 2.8e-236 822.4 742 58.4
CARHR034750 Cardamine hirsuta HOM05D004674 ORTHO05D007261 4.8e-236 821.6 747 58.9
unitig_60.g25534 Utricularia gibba HOM05D004674 ORTHO05D007261 8.2e-236 820.8 748 57.6
ATR0568G133 Amborella trichopoda HOM05D004674 ORTHO05D007261 1.4e-235 820.1 712 61.0
Phvul.003G256400 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 6.9e-235 817.8 651 63.9
ClCG01G019830 Citrullus lanatus HOM05D004674 ORTHO05D007261 2.2e-233 812.8 792 55.1
Rhsim08G0121400 Rhododendron simsii HOM05D004674 ORTHO05D007261 6.5e-233 811.2 789 56.3
SGA_v2.0_scaffold12G06320 Striga asiatica HOM05D004674 ORTHO05D007261 8.5e-233 810.8 741 58.7
FAN19G2260 Fragaria x ananassa HOM05D004674 ORTHO05D007261 5.5e-232 808.1 750 59.2
AUR62004091 Chenopodium quinoa HOM05D004674 ORTHO05D007261 1.0e-230 803.9 776 55.8
FAN28G0143 Fragaria x ananassa HOM05D004674 ORTHO05D007261 1.4e-230 803.5 750 58.0
Lj4A206G17 Lonicera japonica HOM05D004674 ORTHO05D007261 3.9e-230 802.0 696 61.4
Sp2g30300 Schrenkiella parvula HOM05D004674 ORTHO05D007261 2.2e-228 796.2 655 63.8
FvH4_1g12760 Fragaria vesca HOM05D004674 ORTHO05D007261 1.1e-224 783.9 643 63.8
Aa31LG1G14940 Aethionema arabicum HOM05D004674 ORTHO05D007261 7.7e-218 761.1 747 55.0
AUR62007603 Chenopodium quinoa HOM05D004674 ORTHO05D007261 1.8e-211 740.0 707 56.4
Manes.02G097100 Manihot esculenta HOM05D004674 ORTHO05D007261 3.2e-208 729.2 745 54.1
Actinidia35628 Actinidia chinensis HOM05D004674 ORTHO05D007261 2.7e-194 682.9 535 63.6
AagrBONN_evm.TU.Sc2ySwM_344.2833 Anthoceros agrestis HOM05D004674 ORTHO05D007261 3.8e-193 679.1 605 58.7
Dinv40019 Davidia involucrata HOM05D004674 ORTHO05D007261 5.9e-186 655.2 498 65.1
TAR376G0765 Trochodendron aralioides HOM05D004674 ORTHO05D007261 1.5e-176 624.0 726 49.7
Psat4g095640 Pisum sativum HOM05D004674 ORTHO05D007261 1.2e-165 587.8 613 52.9
Thecc.01G030000 Theobroma cacao HOM05D004674 ORTHO05D007261 7.1e-155 552.0 552 53.3
TAR376G0038 Trochodendron aralioides HOM05D004674 ORTHO05D007261 6.6e-153 545.4 554 54.2
TAR376G0961 Trochodendron aralioides HOM05D004674 ORTHO05D007261 8.4e-140 501.9 535 53.1
MELO3C007854.2 Cucumis melo HOM05D004674 ORTHO05D007261 3.5e-130 469.9 681 42.1
COL.COLO4_22029 Corchorus olitorius HOM05D004674 ORTHO05D007261 2.2e-116 424.1 419 51.6
TWI09G0580 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 4.2e-115 419.9 422 52.6
Potri.005G120100 Populus trichocarpa HOM05D004674 ORTHO05D007261 7.4e-112 409.1 423 52.0
Atru.chr3.652 Acer truncatum HOM05D004674 ORTHO05D007261 3.7e-111 406.8 419 51.1
PSO170G6195 Papaver somniferum HOM05D004674 ORTHO05D007261 3.1e-102 377.1 428 48.6
PSO407G0425 Papaver somniferum HOM05D004674 ORTHO05D007261 1.2e-101 375.2 425 46.8
Gohir.A11G182500 Gossypium hirsutum HOM05D004674 ORTHO05D007261 9.1e-94 349.0 418 46.4
Actinidia19204 Actinidia chinensis HOM05D004674 ORTHO05D007261 2.5e-91 340.9 406 47.0
Glyma.16G133867 Glycine max HOM05D004674 ORTHO05D007261 1.8e-89 334.7 222 73.4
Gorai.007G201400 Gossypium raimondii HOM05D004674 ORTHO05D007261 6.3e-87 326.2 351 49.6
MELO3C010392.2 Cucumis melo HOM05D004674 ORTHO05D007261 1.8e-86 324.7 494 41.3
Gohir.D11G189150 Gossypium hirsutum HOM05D004674 ORTHO05D007261 2.7e-85 320.9 351 49.0
MD02G1142700 Malus domestica HOM05D004674 ORTHO05D007261 3.6e-82 310.5 261 64.0
Psat0s3062g0040 Pisum sativum HOM05D004674 ORTHO05D007261 6.3e-79 299.7 202 72.3
Zm00001eb098830 Zea mays HOM05D004674 ORTHO05D007261 1.5e-59 235.3 168 69.6
Zm00001eb124970 Zea mays HOM05D004674 ORTHO05D007261 1.5e-59 235.3 163 73.0
vmacro19462 Vaccinium macrocarpon HOM05D004674 ORTHO05D007261 4.3e-51 207.2 137 73.0
Duzib147G1548 Durio zibethinus HOM05D004674 ORTHO05D007261 9.5e-51 206.1 230 50.9
TAR376G0549 Trochodendron aralioides HOM05D004674 ORTHO05D007261 6.0e-45 186.8 129 69.8
Phvul.003G256200 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 6.4e-39 166.8 141 57.4
Glyma.16G133933 Glycine max HOM05D004674 ORTHO05D007261 4.2e-38 164.1 151 54.3
Psat4g095680 Pisum sativum HOM05D004674 ORTHO05D007261 4.2e-38 164.1 105 75.2
QL03p066021 Quercus lobata HOM05D004674 ORTHO05D029177 2.3e-36 158.3 338 32.8
Atru.chr3.653 Acer truncatum HOM05D004674 ORTHO05D007261 3.3e-35 154.5 95 74.7
Ca_06503_v3 Cicer arietinum L. HOM05D000059 ORTHO05D000128 3.3e-35 154.5 117 61.5
Lj4C205T11 Lonicera japonica HOM05D004674 ORTHO05D007261 1.4e-33 149.1 301 37.5
SEGI_19277 Sequoiadendron giganteum HOM05D004674 ORTHO05D020551 1.2e-29 136.0 239 37.7
Dinv40102 Davidia involucrata HOM05D004674 ORTHO05D020551 6.7e-28 130.2 93 66.7
MD02G1142800 Malus domestica HOM05D004674 ORTHO05D020551 1.9e-27 128.6 116 55.2
Zm00001eb135660 Zea mays HOM05D004674 ORTHO05D007261 1.8e-25 122.1 86 72.1
MELO3C028475.2 Cucumis melo HOM05D004674 ORTHO05D029177 1.3e-23 115.9 81 61.7
Ca_07052_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 3.2e-22 111.3 146 43.2
Ca_22377_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 3.5e-21 107.8 141 44.0
Zm00001eb334700 Zea mays HOM05D004674 ORTHO05D007261 2.8e-18 98.2 72 70.8
HanXRQChr08g0221331 Helianthus annuus HOM05D004674 ORTHO05D021509 5.5e-14 84.0 75 58.7
arahy.Tifrunner.gnm1.ann1.TV0A1X Arachis hypogaea HOM05D004674 ORTHO05D007261 7.1e-14 83.6 100 42.0
GSVIVG01017515001 Vitis vinifera HOM05D004674 ORTHO05D020551 6.0e-13 80.5 50 66.0
GSVIVG01005333001 Vitis vinifera HOM05D004674 ORTHO05D020551 3.9e-12 77.8 50 64.0
Psat2g002040 Pisum sativum HOM05D004674 ORTHO05D327579 1.5e-11 75.9 181 35.9
SGA_v2.0_scaffold48G18033 Striga asiatica HOM05D004674 ORTHO05D051422 2.2e-10 72.0 146 33.6
Gohir.A06G159466 Gossypium hirsutum HOM05D004674 ORTHO05D029177 2.4e-09 68.6 52 53.8
Gorai.010G192800 Gossypium raimondii HOM05D004674 ORTHO05D029177 2.0e-08 65.5 52 51.9
MELO3C028160.2 Cucumis melo HOM05D004674 ORTHO05D029175 6.5e-07 60.5 36 80.6
MD02G1142900 Malus domestica HOM05D004674 ORTHO05D007261 6.5e-07 60.5 139 36.7
Duzib248G0237 Durio zibethinus HOM05D004674 ORTHO05D020551 4.2e-06 57.8 44 52.3


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