Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_14630 Physcomitrium patens HOM05D005846 ORTHO05D007369 2.0e-261 906.0 752 100.0
Mapoly0005s0221 Marchantia polymorpha HOM05D005846 ORTHO05D007369 1.6e-85 321.6 285 69.1
AagrBONN_evm.TU.Sc2ySwM_117.1077 Anthoceros agrestis HOM05D005846 ORTHO05D007369 6.9e-81 306.2 275 65.8
ATR0559G037 Amborella trichopoda HOM05D005846 ORTHO05D007369 1.4e-70 271.9 204 68.1
Cfa011122 Carpinus fangiana HOM05D005846 ORTHO05D007369 2.4e-70 271.2 210 66.7
MBI05_g14240_MAGBIO Magnolia biondii HOM05D005846 ORTHO05D007369 4.2e-70 270.4 210 66.2
CiPaw.06G031700 Carya illinoinensis HOM05D005846 ORTHO05D007369 7.1e-70 269.6 206 66.5
COL.COLO4_35176 Corchorus olitorius HOM05D005846 ORTHO05D007369 9.3e-70 269.2 205 68.3
Potri.014G057000 Populus trichocarpa HOM05D005846 ORTHO05D007369 9.3e-70 269.2 203 68.0
Dinv44098 Davidia involucrata HOM05D005846 ORTHO05D007369 1.2e-69 268.9 205 68.3
Carub.0004s2760 Capsella rubella HOM05D005846 ORTHO05D007369 1.6e-69 268.5 201 69.2
arahy.Tifrunner.gnm1.ann1.DPE9LE Arachis hypogaea HOM05D005846 ORTHO05D007369 2.1e-69 268.1 208 66.8
arahy.Tifrunner.gnm1.ann1.SA9NP4 Arachis hypogaea HOM05D005846 ORTHO05D007369 2.1e-69 268.1 208 66.8
QL04p035021 Quercus lobata HOM05D005846 ORTHO05D007369 2.1e-69 268.1 204 67.6
Thecc.01G387400 Theobroma cacao HOM05D005846 ORTHO05D007369 2.1e-69 268.1 205 68.3
Aqoxy5G03824 Aquilegia oxysepala HOM05D005846 ORTHO05D007369 3.5e-69 267.3 213 65.3
Duzib116G0440 Durio zibethinus HOM05D005846 ORTHO05D007369 3.5e-69 267.3 199 69.3
HanXRQChr06g0168821 Helianthus annuus HOM05D005846 ORTHO05D007369 3.5e-69 267.3 212 65.1
Actinidia22778 Actinidia chinensis HOM05D005846 ORTHO05D007369 6.0e-69 266.5 204 67.2
Actinidia22833 Actinidia chinensis HOM05D005846 ORTHO05D007369 6.0e-69 266.5 204 67.2
Sp4g27070 Schrenkiella parvula HOM05D005846 ORTHO05D007369 6.0e-69 266.5 201 68.2
CARHR140260 Cardamine hirsuta HOM05D005846 ORTHO05D007369 7.9e-69 266.2 201 68.7
RcHm_v2.0_Chr1g0348261 Rosa chinensis HOM05D005846 ORTHO05D007369 7.9e-69 266.2 205 66.3
SGA_v2.0_scaffold52G19202 Striga asiatica HOM05D005846 ORTHO05D007369 7.9e-69 266.2 197 71.1
Lj1g0009878 Lotus japonicus HOM05D005846 ORTHO05D007369 1.0e-68 265.8 201 68.2
AL4G44100 Arabidopsis lyrata HOM05D005846 ORTHO05D007369 1.3e-68 265.4 201 68.7
Thhalv10001339m.g Eutrema salsugineum HOM05D005846 ORTHO05D007369 1.3e-68 265.4 201 68.2
Hund27391 Selenicereus undatus HOM05D005846 ORTHO05D007369 1.3e-68 265.4 206 68.0
CANSAT21G1379 Cannabis sativa HOM05D005846 ORTHO05D007369 1.8e-68 265.0 208 66.3
Phvul.007G143350 Phaseolus vulgaris HOM05D005846 ORTHO05D007369 1.8e-68 265.0 198 68.7
Solyc01g090670.3 Solanum lycopersicum HOM05D005846 ORTHO05D007369 1.8e-68 265.0 206 66.5
VMungo1383G2837 Vigna mungo HOM05D005846 ORTHO05D007369 1.8e-68 265.0 202 67.8
Gohir.D11G145600 Gossypium hirsutum HOM05D005846 ORTHO05D007369 2.3e-68 264.6 198 69.7
TPR.G39153 Trifolium pratense HOM05D005846 ORTHO05D007369 3.0e-68 264.2 277 59.2
Haze_02742 Corylus avellana HOM05D005846 ORTHO05D007369 3.9e-68 263.8 222 63.1
Medtr7g045280 Medicago truncatula HOM05D005846 ORTHO05D007369 5.1e-68 263.5 206 65.5
Prupe.2G134200 Prunus persica HOM05D005846 ORTHO05D007369 5.1e-68 263.5 198 68.2
GSVIVG01018216001 Vitis vinifera HOM05D005846 ORTHO05D007369 5.1e-68 263.5 212 63.7
CAN.G899.26 Capsicum annuum HOM05D005846 ORTHO05D007369 6.7e-68 263.1 195 68.7
MD07G1110700 Malus domestica HOM05D005846 ORTHO05D007369 6.7e-68 263.1 206 66.0
AT2G45000 Arabidopsis thaliana HOM05D005846 ORTHO05D007369 8.7e-68 262.7 197 69.5
BraA05t19484Z Brassica rapa HOM05D005846 ORTHO05D007369 8.7e-68 262.7 201 67.2
Ciclev10019079m.g Citrus clementina HOM05D005846 ORTHO05D007369 8.7e-68 262.7 199 67.8
Lj9C561G11 Lonicera japonica HOM05D005846 ORTHO05D007369 8.7e-68 262.7 204 66.7
MSTRG.28219 Avicennia marina HOM05D005846 ORTHO05D007369 1.1e-67 262.3 208 65.4
A05p05100 Brassica napus HOM05D005846 ORTHO05D007369 1.1e-67 262.3 201 67.2
Nitab4.5_0003110g0060 Nicotiana tabacum HOM05D005846 ORTHO05D007369 1.1e-67 262.3 205 64.9
PGR004G1251 Punica granatum HOM05D005846 ORTHO05D007369 1.1e-67 262.3 198 68.2
vmacro13469 Vaccinium macrocarpon HOM05D005846 ORTHO05D007369 1.1e-67 262.3 200 68.0
Rhsim02G0216700 Rhododendron simsii HOM05D005846 ORTHO05D007369 1.5e-67 261.9 198 67.7
CSS0006984 Camellia sinensis var. sinensis HOM05D005846 ORTHO05D007369 2.5e-67 261.2 210 66.2
ECA236G0469 Erigeron canadensis HOM05D005846 ORTHO05D007369 2.5e-67 261.2 198 68.2
Gohir.A11G139400 Gossypium hirsutum HOM05D005846 ORTHO05D007369 2.5e-67 261.2 198 68.7
PSO675G5996 Papaver somniferum HOM05D005846 ORTHO05D007369 2.5e-67 261.2 204 66.2
Sabra14G0041600 Salix brachista HOM05D002053 ORTHO05D002135 2.5e-67 261.2 199 66.8
THA.LOC104802481 Tarenaya hassleriana HOM05D005846 ORTHO05D007369 2.5e-67 261.2 200 68.0
BcaC02g12270 Brassica carinata HOM05D005846 ORTHO05D007369 3.3e-67 260.8 201 67.2
Migut.B01566 Erythranthe guttata HOM05D005846 ORTHO05D007369 3.3e-67 260.8 208 64.9
Eucgr.D02512 Eucalyptus grandis HOM05D005846 ORTHO05D007369 3.3e-67 260.8 205 65.9
DCAR_031886 Daucus carota HOM05D005846 ORTHO05D007369 4.3e-67 260.4 207 64.7
Ah.05g173450 Amaranthus hybridus HOM05D005846 ORTHO05D007369 5.6e-67 260.0 201 67.2
PSO541G5798 Papaver somniferum HOM05D005846 ORTHO05D007369 7.4e-67 259.6 204 65.7
Sed0022623 Sechium edule HOM05D005846 ORTHO05D007369 7.4e-67 259.6 206 66.5
Sopen01g036400 Solanum pennellii HOM05D005846 ORTHO05D007369 7.4e-67 259.6 304 58.6
CSS0013945 Camellia sinensis var. sinensis HOM05D005846 ORTHO05D007369 9.6e-67 259.2 210 65.7
Manes.05G051500 Manihot esculenta HOM05D005846 ORTHO05D007369 9.6e-67 259.2 201 67.2
FAN10G4209 Fragaria x ananassa HOM05D005846 ORTHO05D007369 1.3e-66 258.8 211 63.0
Atru.chr5.196 Acer truncatum HOM05D005846 ORTHO05D007369 1.6e-66 258.5 205 65.4
FAN06G0321 Fragaria x ananassa HOM05D005846 ORTHO05D007369 1.6e-66 258.5 211 62.6
Glyma.01G074700 Glycine max HOM05D005846 ORTHO05D007369 1.6e-66 258.5 275 60.7
Psat3g158120 Pisum sativum HOM05D005846 ORTHO05D007369 1.6e-66 258.5 270 64.4
Cc02_g24740 Coffea canephora HOM05D005846 ORTHO05D007369 2.1e-66 258.1 207 65.2
FAN01G1706 Fragaria x ananassa HOM05D005846 ORTHO05D007369 2.1e-66 258.1 211 62.6
FAN03G1473 Fragaria x ananassa HOM05D005846 ORTHO05D007369 2.1e-66 258.1 211 62.6
C04p05950 Brassica napus HOM05D005846 ORTHO05D007369 2.8e-66 257.7 201 66.7
BolC4t22226H Brassica oleracea HOM05D005846 ORTHO05D007369 2.8e-66 257.7 201 66.7
Glyma.11G162365 Glycine max HOM05D005846 ORTHO05D007369 2.8e-66 257.7 198 67.7
Gorai.007G156100 Gossypium raimondii HOM05D005846 ORTHO05D007369 2.8e-66 257.7 205 67.3
Ca_26287_v3 Cicer arietinum L. HOM05D005846 ORTHO05D007369 3.7e-66 257.3 278 57.6
CsaV3_6G009050 Cucumis sativus L. HOM05D005846 ORTHO05D007369 3.7e-66 257.3 207 65.7
Lsat_1_v5_gn_7_11161 Lactuca sativa HOM05D005846 ORTHO05D007369 3.7e-66 257.3 214 64.5
EL10Ac1g00809 Beta vulgaris HOM05D005846 ORTHO05D007369 4.8e-66 256.9 194 67.5
FAN10G1341 Fragaria x ananassa HOM05D005846 ORTHO05D007369 1.1e-65 255.8 205 63.9
TWI14G0811 Tripterygium wilfordii HOM05D005846 ORTHO05D007369 1.1e-65 255.8 193 68.4
FAN06G3163 Fragaria x ananassa HOM05D005846 ORTHO05D007369 3.1e-65 254.2 211 61.6
TAR375G0515 Trochodendron aralioides HOM05D005846 ORTHO05D007369 3.1e-65 254.2 193 69.4
Lalb_Chr19g0126671 Lupinus albus HOM05D005846 ORTHO05D007369 4.0e-65 253.8 194 68.0
HanXRQChr04g0123471 Helianthus annuus HOM05D005846 ORTHO05D007369 3.8e-63 247.3 190 66.8
CDE02G2440 Ceratophyllum demersum HOM05D005846 ORTHO05D007369 8.4e-63 246.1 282 50.4
Aa31LG1G26590 Aethionema arabicum HOM05D005846 ORTHO05D007369 1.4e-62 245.4 199 63.3
Nn6g33892 Nelumbo nucifera HOM05D005846 ORTHO05D007369 2.5e-62 244.6 195 65.1
unitig_26.g8879 Utricularia gibba HOM05D005846 ORTHO05D007369 3.2e-62 244.2 200 66.0
CDE04G1707 Ceratophyllum demersum HOM05D005846 ORTHO05D007369 5.5e-62 243.4 291 49.1
Oeu061505.1 Olea europaea HOM05D005846 ORTHO05D007369 2.1e-61 241.5 178 69.7
FvH4_7g10470 Fragaria vesca HOM05D005846 ORTHO05D007369 3.5e-61 240.7 189 65.1
Peaxi162Scf00377g00722 Petunia axillaris HOM05D005846 ORTHO05D007369 7.9e-61 239.6 191 63.9
Zm00001eb367060 Zea mays HOM05D005846 ORTHO05D007369 3.0e-60 237.7 195 62.6
ClCG06G002930 Citrullus lanatus HOM05D005846 ORTHO05D007369 4.3e-59 233.8 191 63.9
HPP92_027757 Vanilla planifolia HOM05D005846 ORTHO05D007369 9.6e-59 232.6 190 63.7
MELO3C022237.2 Cucumis melo HOM05D005846 ORTHO05D007369 2.8e-58 231.1 248 54.0
CBR_g21126 Chara braunii HOM05D005846 ORTHO05D007369 1.5e-56 225.3 181 66.9
AUR62004139 Chenopodium quinoa HOM05D005846 ORTHO05D007369 3.9e-52 210.7 203 56.2
arahy.Tifrunner.gnm1.ann1.2XVX2B Arachis hypogaea HOM05D005846 ORTHO05D007369 4.8e-50 203.8 221 53.4
PGR004G1857 Punica granatum HOM05D005846 ORTHO05D007369 3.1e-49 201.1 160 66.9
AUR62013700 Chenopodium quinoa HOM05D005846 ORTHO05D007369 4.5e-48 197.2 188 55.9
Sc02g0002920 Simmondsia chinensis HOM05D005846 ORTHO05D007369 4.5e-48 197.2 179 60.9
Nitab4.5_0001823g0090 Nicotiana tabacum HOM05D005846 ORTHO05D007369 2.4e-41 174.9 168 57.1
HPP92_002750 Vanilla planifolia HOM05D005846 ORTHO05D007369 4.8e-34 150.6 132 59.1
Cre16.g677700 Chlamydomonas reinhardtii HOM05D005846 ORTHO05D007369 1.7e-26 125.6 212 37.7
PRCOL_00002612 Prasinoderma coloniale HOM05D005846 ORTHO05D007369 1.8e-25 122.1 211 35.1
Os01g0856600 Oryza sativa ssp. japonica HOM05D005846 ORTHO05D007369 2.7e-21 108.2 104 51.0
arahy.Tifrunner.gnm1.ann1.V1AVP1 Arachis hypogaea HOM05D005846 ORTHO05D007369 3.6e-21 107.8 103 60.2
Atru.chr5.198 Acer truncatum HOM05D002424 ORTHO05D002640 3.4e-19 101.3 78 64.1
Cpa.g.sc22.5 Carica papaya HOM05D005846 ORTHO05D007369 3.1e-17 94.7 72 69.4
QL05p084337 Quercus lobata HOM05D005846 ORTHO05D007369 7.7e-16 90.1 64 68.8
Cpa.g.sc22.4 Carica papaya HOM05D005846 ORTHO05D007369 1.5e-14 85.9 131 43.5
MCO01G259 Micromonas commoda HOM05D005846 ORTHO05D007369 1.2e-13 82.8 145 36.6
MCO01G299 Micromonas commoda HOM05D005846 ORTHO05D007369 1.2e-13 82.8 145 36.6
QL04p035108 Quercus lobata HOM05D005846 ORTHO05D007369 2.7e-13 81.6 65 61.5
HanXRQChr12g0364311 Helianthus annuus HOM05D005846 ORTHO05D007369 3.6e-13 81.3 56 69.6
HPP92_006013 Vanilla planifolia HOM05D005846 ORTHO05D007369 6.1e-13 80.5 107 43.9
HPP92_002751 Vanilla planifolia HOM05D005846 ORTHO05D007369 2.3e-12 78.6 58 63.8
QL04p035237 Quercus lobata HOM05D005846 ORTHO05D007369 2.6e-11 75.1 68 55.9
Cfa023102 Carpinus fangiana HOM05D000298 ORTHO05D125655 7.5e-11 73.6 193 28.5
Lsat_1_v5_gn_4_126501 Lactuca sativa HOM05D005846 ORTHO05D007369 7.5e-11 73.6 63 55.6
HanXRQChr16g0530801 Helianthus annuus HOM05D005846 ORTHO05D007369 1.3e-10 72.8 174 29.9
C09p68450 Brassica napus HOM05D005846 ORTHO05D007369 5.4e-09 67.4 66 53.0
HanXRQChr01g0009681 Helianthus annuus HOM05D005846 ORTHO05D007369 1.2e-08 66.2 41 73.2
A05p20700 Brassica napus HOM05D005846 ORTHO05D007369 5.0e-07 60.8 52 53.8
Atru.chr5.201 Acer truncatum HOM05D005846 ORTHO05D007369 6.6e-07 60.5 58 50.0


User provided reference genes

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