Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c13_21930 Physcomitrium patens HOM05D004138 ORTHO05D004898 2.5e-176 622.1 333 100.0
Mapoly0095s0045 Marchantia polymorpha HOM05D004138 ORTHO05D004898 2.6e-101 372.9 321 63.6
CANSAT78G2043 Cannabis sativa HOM05D004138 ORTHO05D004898 1.1e-94 350.9 198 86.4
THA.LOC104808545 Tarenaya hassleriana HOM05D004138 ORTHO05D004898 5.3e-94 348.6 198 84.3
Manes.03G178800 Manihot esculenta HOM05D004138 ORTHO05D004898 7.0e-94 348.2 198 85.4
Atru.ctg752_3.80 Acer truncatum HOM05D004138 ORTHO05D004898 1.6e-93 347.1 198 84.8
PSO210G3182 Papaver somniferum HOM05D004138 ORTHO05D004898 1.6e-93 347.1 198 85.4
Phvul.007G057200 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 1.6e-93 347.1 198 84.3
Lalb_Chr10g0096121 Lupinus albus HOM05D004138 ORTHO05D004898 2.0e-93 346.7 198 83.8
arahy.Tifrunner.gnm1.ann1.M0DXBI Arachis hypogaea HOM05D004138 ORTHO05D004898 2.6e-93 346.3 198 84.8
arahy.Tifrunner.gnm1.ann1.WZ653D Arachis hypogaea HOM05D004138 ORTHO05D004898 2.6e-93 346.3 198 84.8
RcHm_v2.0_Chr4g0416251 Rosa chinensis HOM05D004138 ORTHO05D004898 2.6e-93 346.3 198 84.3
PSO832G0920 Papaver somniferum HOM05D004138 ORTHO05D004898 4.5e-93 345.5 198 84.8
CARHR221500 Cardamine hirsuta HOM05D004138 ORTHO05D004898 5.9e-93 345.1 198 84.3
Potri.010G087600 Populus trichocarpa HOM05D004138 ORTHO05D004898 5.9e-93 345.1 198 83.8
VMungo0720G0383 Vigna mungo HOM05D004138 ORTHO05D004898 5.9e-93 345.1 198 83.3
BcaB02g07851 Brassica carinata HOM05D004138 ORTHO05D004898 7.7e-93 344.7 198 84.8
VMungo0720G1944 Vigna mungo HOM05D004138 ORTHO05D004898 7.7e-93 344.7 198 84.3
BcaC09g49174 Brassica carinata HOM05D004138 ORTHO05D004898 1.7e-92 343.6 198 83.8
Sp3g20190 Schrenkiella parvula HOM05D004138 ORTHO05D004898 1.7e-92 343.6 198 83.8
TPR.G34563 Trifolium pratense HOM05D004138 ORTHO05D004898 1.7e-92 343.6 198 83.8
BcaB04g20518 Brassica carinata HOM05D004138 ORTHO05D004898 2.2e-92 343.2 198 84.3
Eucgr.H03482 Eucalyptus grandis HOM05D004138 ORTHO05D004898 2.2e-92 343.2 198 83.8
BcaB06g26344 Brassica carinata HOM05D004138 ORTHO05D004898 2.9e-92 342.8 198 83.8
Carub.0007s2719 Capsella rubella HOM05D004138 ORTHO05D004898 2.9e-92 342.8 198 83.8
CDE07G0326 Ceratophyllum demersum HOM05D004138 ORTHO05D004898 2.9e-92 342.8 198 83.8
Aqoxy2G03389 Aquilegia oxysepala HOM05D004138 ORTHO05D004898 3.8e-92 342.4 198 84.3
CAN.G490.3 Capsicum annuum HOM05D004138 ORTHO05D004898 3.8e-92 342.4 198 83.8
HanXRQChr14g0432251 Helianthus annuus HOM05D004138 ORTHO05D004898 3.8e-92 342.4 198 84.3
MD13G1192800 Malus domestica HOM05D004138 ORTHO05D004898 3.8e-92 342.4 198 84.3
PGR004G1517 Punica granatum HOM05D004138 ORTHO05D004898 3.8e-92 342.4 198 83.8
TPR.G5464 Trifolium pratense HOM05D004138 ORTHO05D004898 3.8e-92 342.4 198 83.8
CSS0016260 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 5.0e-92 342.0 198 83.8
CARHR098330 Cardamine hirsuta HOM05D004138 ORTHO05D004898 5.0e-92 342.0 198 82.8
Ca_26329_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 6.5e-92 341.7 217 78.3
Duzib052G0532 Durio zibethinus HOM05D004138 ORTHO05D004898 6.5e-92 341.7 198 84.3
CiPaw.01G165700 Carya illinoinensis HOM05D004138 ORTHO05D004898 8.5e-92 341.3 231 74.5
arahy.Tifrunner.gnm1.ann1.Y7X6HY Arachis hypogaea HOM05D004138 ORTHO05D004898 1.1e-91 340.9 198 83.8
Hma1.2p1_1344F.1_g277140 Hydrangea macrophylla HOM05D004138 ORTHO05D004898 1.1e-91 340.9 198 83.3
CSS0012312 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 1.5e-91 340.5 198 82.8
Gohir.D09G218200 Gossypium hirsutum HOM05D004138 ORTHO05D004898 1.5e-91 340.5 198 83.8
Gorai.006G239100 Gossypium raimondii HOM05D004138 ORTHO05D004898 1.5e-91 340.5 198 83.8
Phvul.007G275100 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 1.5e-91 340.5 198 82.8
CsaV3_7G022530 Cucumis sativus L. HOM05D004138 ORTHO05D004898 1.9e-91 340.1 198 83.8
DCAR_027216 Daucus carota HOM05D004138 ORTHO05D004898 1.9e-91 340.1 198 84.8
Thhalv10025980m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 1.9e-91 340.1 198 83.8
Gohir.A09G215700 Gossypium hirsutum HOM05D004138 ORTHO05D004898 1.9e-91 340.1 198 83.8
Medtr1g103820 Medicago truncatula HOM05D004138 ORTHO05D004898 1.9e-91 340.1 198 83.3
AT3G22425 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 2.5e-91 339.7 198 82.8
Lj3A735T49 Lonicera japonica HOM05D004138 ORTHO05D004898 2.5e-91 339.7 198 82.8
Psat6g207600 Pisum sativum HOM05D004138 ORTHO05D004898 2.5e-91 339.7 198 82.8
AL7G40920 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 3.2e-91 339.3 198 83.3
Dinv44535 Davidia involucrata HOM05D004138 ORTHO05D004898 4.2e-91 339.0 239 70.7
ATR0697G231 Amborella trichopoda HOM05D004138 ORTHO05D004898 5.5e-91 338.6 198 82.8
FvH4_4g15510 Fragaria vesca HOM05D004138 ORTHO05D004898 5.5e-91 338.6 198 82.8
MD16G1193500 Malus domestica HOM05D004138 ORTHO05D004898 5.5e-91 338.6 198 82.8
Oeu050278.3 Olea europaea HOM05D004138 ORTHO05D004898 5.5e-91 338.6 198 82.8
SalBow3G1121 Salvia bowleyana HOM05D004138 ORTHO05D004898 5.5e-91 338.6 198 82.8
Sp7g13050 Schrenkiella parvula HOM05D004138 ORTHO05D004898 5.5e-91 338.6 195 83.6
DCAR_002386 Daucus carota HOM05D004138 ORTHO05D004898 7.2e-91 338.2 198 83.3
Os04g0617800 Oryza sativa ssp. japonica HOM05D004138 ORTHO05D004898 7.2e-91 338.2 198 82.3
BcaC05g28070 Brassica carinata HOM05D004138 ORTHO05D004898 9.4e-91 337.8 198 81.8
C05p40930 Brassica napus HOM05D004138 ORTHO05D004898 9.4e-91 337.8 198 81.8
CiPaw.02G097200 Carya illinoinensis HOM05D004138 ORTHO05D004898 9.4e-91 337.8 198 82.8
Ca_10902_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 9.4e-91 337.8 198 82.8
Thhalv10021310m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 9.4e-91 337.8 198 82.3
Lj5g0002897 Lotus japonicus HOM05D004138 ORTHO05D004898 9.4e-91 337.8 198 82.3
Solyc09g076020.3 Solanum lycopersicum HOM05D004138 ORTHO05D004898 9.4e-91 337.8 198 82.3
Sopen09g030850 Solanum pennellii HOM05D004138 ORTHO05D004898 9.4e-91 337.8 198 82.3
TWI15G0835 Tripterygium wilfordii HOM05D004138 ORTHO05D004898 9.4e-91 337.8 237 72.6
Ciclev10005599m.g Citrus clementina HOM05D004138 ORTHO05D004898 1.2e-90 337.4 198 82.3
ECA238G3454 Erigeron canadensis HOM05D004138 ORTHO05D004898 1.2e-90 337.4 198 83.3
Lalb_Chr17g0338611 Lupinus albus HOM05D004138 ORTHO05D004898 1.2e-90 337.4 198 82.3
Sed0017770 Sechium edule HOM05D004138 ORTHO05D004898 1.2e-90 337.4 198 82.8
Thecc.04G231800 Theobroma cacao HOM05D004138 ORTHO05D004898 1.2e-90 337.4 198 83.3
Carub.0003s2260 Capsella rubella HOM05D004138 ORTHO05D004898 1.6e-90 337.0 198 82.8
HanXRQChr09g0265721 Helianthus annuus HOM05D004138 ORTHO05D004898 2.7e-90 336.3 198 83.3
Nn4g26636 Nelumbo nucifera HOM05D004138 ORTHO05D004898 2.7e-90 336.3 198 82.3
Glyma.20G145900 Glycine max HOM05D004138 ORTHO05D004898 3.6e-90 335.9 198 82.3
Aa31LG8G8990 Aethionema arabicum HOM05D004138 ORTHO05D004898 4.7e-90 335.5 203 80.8
MSTRG.21855 Avicennia marina HOM05D004138 ORTHO05D004898 8.0e-90 334.7 198 81.8
PGSC0003DMG400030085 Solanum tuberosum HOM05D004138 ORTHO05D004898 1.0e-89 334.3 198 81.3
Cc03_g03750 Coffea canephora HOM05D004138 ORTHO05D004898 1.4e-89 334.0 198 81.3
Migut.N00183 Erythranthe guttata HOM05D004138 ORTHO05D004898 1.8e-89 333.6 198 81.8
AT4G14910 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 5.2e-89 332.0 195 82.1
GSVIVG01017973001 Vitis vinifera HOM05D004138 ORTHO05D004898 1.5e-88 330.5 198 79.3
Nitab4.5_0001560g0020 Nicotiana tabacum HOM05D004138 ORTHO05D004898 2.0e-88 330.1 188 84.0
Lsat_1_v5_gn_2_31480 Lactuca sativa HOM05D004138 ORTHO05D004898 3.4e-88 329.3 193 82.4
A01p32660 Brassica napus HOM05D004138 ORTHO05D004898 4.4e-88 328.9 188 83.5
C01p41840 Brassica napus HOM05D004138 ORTHO05D004898 5.7e-88 328.6 188 83.5
BolC1t04138H Brassica oleracea HOM05D004138 ORTHO05D004898 5.7e-88 328.6 188 83.5
BraA01t03394Z Brassica rapa HOM05D004138 ORTHO05D004898 5.7e-88 328.6 188 83.5
TAR636G0642 Trochodendron aralioides HOM05D004138 ORTHO05D004898 7.5e-88 328.2 192 82.3
CBR_g48324 Chara braunii HOM05D004138 ORTHO05D004898 9.7e-88 327.8 198 80.8
QL06p002509 Quercus lobata HOM05D004138 ORTHO05D004898 1.7e-87 327.0 194 80.9
Rhsim02G0024100 Rhododendron simsii HOM05D004138 ORTHO05D004898 2.8e-87 326.2 188 83.0
AUR62033623 Chenopodium quinoa HOM05D004138 ORTHO05D004898 4.8e-87 325.5 195 80.0
Zm00001eb070570 Zea mays HOM05D004138 ORTHO05D004898 4.8e-87 325.5 198 80.3
FAN07G1942 Fragaria x ananassa HOM05D004138 ORTHO05D004898 6.3e-87 325.1 190 82.1
Lj6A608T71 Lonicera japonica HOM05D004138 ORTHO05D004898 8.3e-87 324.7 193 80.3
FAN17G0737 Fragaria x ananassa HOM05D004138 ORTHO05D004898 1.1e-86 324.3 190 82.1
TAR365G0475 Trochodendron aralioides HOM05D004138 ORTHO05D004898 1.1e-86 324.3 190 82.1
EL10Ac1g01312 Beta vulgaris HOM05D004138 ORTHO05D004898 1.8e-86 323.6 191 80.1
Cfa015643 Carpinus fangiana HOM05D004138 ORTHO05D004898 1.8e-86 323.6 188 82.4
FAN12G1931 Fragaria x ananassa HOM05D004138 ORTHO05D004898 1.8e-86 323.6 188 82.4
FAN22G1640 Fragaria x ananassa HOM05D004138 ORTHO05D004898 1.8e-86 323.6 188 82.4
A05p26300 Brassica napus HOM05D004138 ORTHO05D004898 2.4e-86 323.2 188 82.4
BolC5t32835H Brassica oleracea HOM05D004138 ORTHO05D004898 3.1e-86 322.8 188 81.4
Sc10g0004960 Simmondsia chinensis HOM05D004138 ORTHO05D004898 1.2e-85 320.9 198 79.8
SMO367G0933 Selaginella moellendorffii HOM05D004138 ORTHO05D004898 2.0e-85 320.1 261 63.2
AUR62034751 Chenopodium quinoa HOM05D004138 ORTHO05D004898 2.7e-85 319.7 188 80.9
Haze_00903 Corylus avellana HOM05D004138 ORTHO05D004898 3.8e-84 315.8 195 79.5
MELO3C012647.2 Cucumis melo HOM05D004138 ORTHO05D004898 5.5e-83 312.0 211 74.4
Haze_03894 Corylus avellana HOM05D004138 ORTHO05D004898 1.8e-81 307.0 193 78.8
Nitab4.5_0000043g0130 Nicotiana tabacum HOM05D004138 ORTHO05D004898 9.8e-80 301.2 212 72.2
Cre02.g103850 Chlamydomonas reinhardtii HOM05D004138 ORTHO05D004898 1.7e-79 300.4 196 73.0
Rhsim02G0024500 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.1e-78 297.7 235 65.5
Cpa.g.sc58.111 Carica papaya HOM05D004138 ORTHO05D004898 4.1e-78 295.8 188 78.2
Psat6g050360 Pisum sativum HOM05D004138 ORTHO05D004898 1.2e-77 294.3 166 84.9
Hund12131 Selenicereus undatus HOM05D004138 ORTHO05D004898 1.2e-77 294.3 198 75.3
COL.COLO4_04735 Corchorus olitorius HOM05D004138 ORTHO05D004898 2.0e-77 293.5 166 86.1
Actinidia36959 Actinidia chinensis HOM05D004138 ORTHO05D004898 1.3e-76 290.8 192 75.5
Sed0010859 Sechium edule HOM05D004138 ORTHO05D004898 1.7e-76 290.4 188 76.6
Potri.008G152701 Populus trichocarpa HOM05D004138 ORTHO05D004898 2.5e-75 286.6 193 73.6
Prupe.1G013300 Prunus persica HOM05D004138 ORTHO05D004898 3.6e-74 282.7 198 72.7
Rhsim02G0024700 Rhododendron simsii HOM05D004138 ORTHO05D004898 8.9e-73 278.1 206 68.4
ClCG06G006210 Citrullus lanatus HOM05D004138 ORTHO05D004898 2.7e-69 266.5 189 72.5
Oeu031232.1 Olea europaea HOM05D004138 ORTHO05D004898 1.3e-68 264.2 153 81.7
Peaxi162Scf00092g01021 Petunia axillaris HOM05D004138 ORTHO05D004898 1.7e-68 263.8 145 87.6
SEGI_10012 Sequoiadendron giganteum HOM05D004138 ORTHO05D004898 3.9e-68 262.7 148 84.5
SGA_v2.0_scaffold20G09126 Striga asiatica HOM05D004138 ORTHO05D004898 3.3e-67 259.6 152 80.9
HPP92_026352 Vanilla planifolia HOM05D004138 ORTHO05D004898 5.6e-67 258.8 198 67.2
Rhsim02G0024200 Rhododendron simsii HOM05D004138 ORTHO05D004898 2.1e-66 256.9 151 81.5
Rhsim02G0025200 Rhododendron simsii HOM05D004138 ORTHO05D004898 3.6e-66 256.1 162 77.8
unitig_0.g724 Utricularia gibba HOM05D004952 ORTHO05D006131 3.6e-66 256.1 165 73.9
SGA_v2.0_scaffold10G05080 Striga asiatica HOM05D004138 ORTHO05D004898 8.0e-66 255.0 152 79.6
Rhsim02G0024800 Rhododendron simsii HOM05D004138 ORTHO05D004898 3.4e-64 249.6 158 75.9
Rhsim02G0025100 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.7e-63 247.3 153 75.8
AL7G43460 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 4.9e-63 245.7 175 73.1
AagrBONN_evm.TU.Sc2ySwM_228.3076 Anthoceros agrestis HOM05D004138 ORTHO05D004898 6.4e-63 245.4 269 54.3
MBI06_g37250_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 2.0e-61 240.4 201 64.7
MBI06_g26001_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 1.0e-60 238.0 198 64.6
AL7G43530 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 5.6e-59 232.3 165 72.7
Dinv13992 Davidia involucrata HOM05D004138 ORTHO05D004898 4.0e-57 226.1 133 79.7
Lj2g0010828 Lotus japonicus HOM05D004138 ORTHO05D004898 9.8e-56 221.5 167 68.9
Sabra10G0055200 Salix brachista HOM05D004138 ORTHO05D004898 2.2e-55 220.3 153 71.2
CDE10G0981 Ceratophyllum demersum HOM05D000366 ORTHO05D000437 3.2e-54 216.5 195 61.0
Haze_27397 Corylus avellana HOM05D004138 ORTHO05D004898 7.1e-54 215.3 195 49.2
arahy.Tifrunner.gnm1.ann1.PP7NHW Arachis hypogaea HOM05D004138 ORTHO05D004898 1.5e-43 181.0 106 81.1
Ah.04g154580 Amaranthus hybridus HOM05D004138 ORTHO05D004898 6.2e-42 175.6 106 78.3
ATR0661G018 Amborella trichopoda HOM05D004138 ORTHO05D004898 1.1e-41 174.9 106 78.3
Sabra08G0116300 Salix brachista HOM05D004138 ORTHO05D004898 3.1e-41 173.3 293 39.6
Cfa024592 Carpinus fangiana HOM05D004138 ORTHO05D004898 8.7e-36 155.2 225 41.8
PRCOL_00007017 Prasinoderma coloniale HOM05D004138 ORTHO05D004898 1.9e-35 154.1 188 42.0
SHI00436 Sapria himalayana HOM05D004138 ORTHO05D004898 5.6e-35 152.5 145 55.2
MCO15G615 Micromonas commoda HOM05D004138 ORTHO05D004898 9.6e-35 151.8 206 39.3
Actinidia40147 Actinidia chinensis HOM05D004138 ORTHO05D004898 3.5e-29 133.3 84 78.6
arahy.Tifrunner.gnm1.ann1.UX9Z2U Arachis hypogaea HOM05D004138 ORTHO05D004898 6.7e-20 102.4 69 69.6
arahy.Tifrunner.gnm1.ann1.J4BC6Z Arachis hypogaea HOM05D004138 ORTHO05D004898 3.3e-19 100.1 69 68.1
Medtr8g045710 Medicago truncatula HOM05D004138 ORTHO05D004898 2.6e-16 90.5 59 74.6
Psat4g223320 Pisum sativum HOM05D004138 ORTHO05D004898 2.1e-13 80.9 53 75.5
CSS0002625 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 2.0e-08 64.3 36 80.6
Medtr1g071390 Medicago truncatula HOM05D004138 ORTHO05D004898 3.4e-08 63.5 118 35.6
AL5G12050 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 7.6e-08 62.4 52 59.6
Rhsim02G0025000 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.0e-07 62.0 40 72.5
arahy.Tifrunner.gnm1.ann1.RWV13Y Arachis hypogaea HOM05D000351 ORTHO05D018478 3.8e-07 60.1 32 84.4
CARHR221520 Cardamine hirsuta HOM05D004138 ORTHO05D004898 6.5e-07 59.3 40 67.5
Actinidia40148 Actinidia chinensis HOM05D004138 ORTHO05D004898 1.9e-06 57.8 42 64.3
Pp3c13_20600 Physcomitrium patens HOM05D000727 ORTHO05D000541 9.3e-06 55.5 101 46.5


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