Gene: AT3G22425
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G22425
- Transcript Identifier AT3G22425.2
- Gene Type Coding gene
- Location Chr3 : 7951110-7952853 : positive
Gene Family Information
- ID HOM05D004138
- #Genes/#Species 170/98
- Phylogenetic origin
- ID ORTHO05D004898
- #Genes/#Species 168/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G22425.2
- symbol IGPD
- Alias HISN5A
- uniprot P34047
Descriptions
- Description imidazoleglycerol-phosphate dehydratase
- Computational description imidazoleglycerol-phosphate dehydratase (IGPD); FUNCTIONS IN: imidazoleglycerol-phosphate dehydratase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Imidazoleglycerol-phosphate dehydratase, conserved site (InterPro:IPR020565), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Imidazoleglycerol-phosphate dehydratase (InterPro:IPR000807); BEST Arabidopsis thaliana protein match is: HISTIDINE BIOSYNTHESIS 5B (TAIR:AT4G14910.1); Has 6614 Blast hits to 6614 proteins in 2210 species: Archae - 198; Bacteria - 4100; Metazoa - 4; Fungi - 195; Plants - 86; Viruses - 0; Other Eukaryotes - 2031 (source: NCBI BLink).
- Computational description imidazoleglycerol-phosphate dehydratase (IGPD); FUNCTIONS IN: imidazoleglycerol-phosphate dehydratase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Imidazoleglycerol-phosphate dehydratase, conserved site (InterPro:IPR020565), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Imidazoleglycerol-phosphate dehydratase (InterPro:IPR000807); BEST Arabidopsis thaliana protein match is: HISTIDINE BIOSYNTHESIS 5B (TAIR:AT4G14910.1); Has 6872 Blast hits to 6870 proteins in 2212 species: Archae - 198; Bacteria - 4110; Metazoa - 4; Fungi - 197; Plants - 87; Viruses - 0; Other Eukaryotes - 2276 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000105 | IDA, IMP IBA IEA | Gene Ontology | histidine biosynthetic process | 1 2 3 |
| GO:0000105 | IEA | InterPro | histidine biosynthetic process | |
| GO:0008652 | IEA | GOA Database | cellular amino acid biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004424 | IEA | GOA Database | imidazoleglycerol-phosphate dehydratase activity | |
| GO:0004424 | IDA IBA | Gene Ontology | imidazoleglycerol-phosphate dehydratase activity | 1 3 |
| GO:0004424 | IEA | InterPro | imidazoleglycerol-phosphate dehydratase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0016829 | IEA | GOA Database | lyase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009507 | ISM | Gene Ontology | chloroplast | |
| GO:0009536 | IEA | GOA Database | plastid |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 4.1.1.2.6 | Amino acid metabolism.biosynthesis.glutamate family.histidine.imidazoleglycerol-phosphate dehydratase |